mRNA_M-pyrifera_M_contig128016.5640.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: UPI00135B5FC6 (tyrosine-type recombinase/integrase n=1 Tax=Dyadobacter sp. 3J3 TaxID=2606600 RepID=UPI00135B5FC6) HSP 1 Score: 174 bits (440), Expect = 1.250e-51 Identity = 86/167 (51.50%), Postives = 116/167 (69.46%), Query Frame = 1
Query: 1 KGTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRALSSSIVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
+ P GKR+YAI+ IA RLG+RASDI GLKFEN+ W +I Q KTG+ +LPL A+VG AI+ Y+K GRP SNE YVF+S PFR + + +T+ V F +G+++ R HG HALRHSLA +L + T + VI+ VLGH+ S S+ YYLRIDL S++ C++
Sbjct: 56 RARPSGKRNYAIVLIAARLGLRASDIAGLKFENLFWQQSIISICQYKTGRQLQLPLLAEVGEAIIEYLKYGRPISNEPYVFLSAGSPFRRMHTPGITSLVNRAFILSGVNIEHRHHGPHALRHSLANLLLEQSTILPVITEVLGHENSRSTKYYLRIDLTSMKQCML 222
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: A0A7X9PNB2_9BACT (Tyrosine-type recombinase/integrase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X9PNB2_9BACT) HSP 1 Score: 176 bits (446), Expect = 1.430e-50 Identity = 88/167 (52.69%), Postives = 116/167 (69.46%), Query Frame = 1
Query: 1 KGTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRALSSSIVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
+ +GKR YAII +A RLG+RASDI LKF+NI W + I + Q KTG ELPL ++VGNAI++Y+K RP+S+E +VF+ PF + +S+VT VQN F K GI+ R HG HALRHSLA +L +T + VIS VLGH+ + S+ +YLRIDL SLR CV+
Sbjct: 230 RNNAVGKRDYAIILLAARLGLRASDIANLKFDNIFWEQNTISFYQYKTGNKLELPLLSEVGNAIVDYLKFSRPQSDEPFVFLCARSPFNPIHTSVVTKIVQNSFAKTGINTKYRRHGPHALRHSLADRLLENQTILPVISEVLGHENTESTRFYLRIDLTSLRQCVL 396
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: UPI001F2F65BA (tyrosine-type recombinase/integrase n=1 Tax=Bacteroides uniformis TaxID=820 RepID=UPI001F2F65BA) HSP 1 Score: 175 bits (444), Expect = 3.150e-50 Identity = 85/167 (50.90%), Postives = 117/167 (70.06%), Query Frame = 1
Query: 1 KGTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRALSSSIVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
+G GKR YA+I +A +LG+RASDIV LKFENI W LI+ +Q KTGK LPL ++GNAI+NY+K+GRP S E Y+F+ N P+R ++ I+T V ++ +KA ID + R HG HALRHS A ++L +T + +IS LGH + S+MYYLRID+ +LR C +
Sbjct: 236 QGDAKGKRDYAMILLATKLGLRASDIVALKFENILWEQSLIKLSQQKTGKNISLPLLPEIGNAIINYLKHGRPVSEESYLFLQANAPYRRINPHILTGIVHSNIKKAKIDCTNRKHGPHALRHSFAGNLLKAETPMPIISEALGHSHTESTMYYLRIDITTLRQCAL 402
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: UPI001E510591 (site-specific integrase n=2 Tax=Salinimicrobium marinum TaxID=680283 RepID=UPI001E510591) HSP 1 Score: 172 bits (437), Expect = 6.010e-50 Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 1
Query: 1 KGTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRALSSS-IVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
+ +PIGKR+YAII +A RLG+RASDI LKF N+ W I Q+KTGK LPL DVGNAI++Y+K GR KS E +F+S P+ +SS +VT VQ FRKAGI + R G H+LRHSL + ML E T + VIS VLGH+ + S+ YYLRIDL S++ C++
Sbjct: 159 RSSPIGKRNYAIILLAARLGLRASDIARLKFANLHWETSTIEIEQVKTGKELILPLLPDVGNAIIDYLKYGRAKSEEACIFLSERPPYSYFTSSNVVTHVVQRAFRKAGIIIKGRRFGPHSLRHSLGFRMLQESTMLPVISEVLGHKSTESTRYYLRIDLKSMQQCML 326
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: A0A7W7F511_9BACT (Integrase n=1 Tax=Parabacteroides faecis TaxID=1217282 RepID=A0A7W7F511_9BACT) HSP 1 Score: 174 bits (442), Expect = 6.530e-50 Identity = 87/167 (52.10%), Postives = 116/167 (69.46%), Query Frame = 1
Query: 1 KGTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRALSSSIVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
+ + +GKR YAII +A RLG+RASDI LKFENI W+ L++ +Q KTGK ELPL ++GNAI++Y+K RPKS E YVF+ PF L S+ +T+ V H AGI++ R HGAHALRHSLA +L ++T + +IS VLGH + S+ YYLRID SL+ C +
Sbjct: 237 RSSDLGKRDYAIILLAARLGLRASDICSLKFENIIWDKSLMQLDQNKTGKRIELPLLTELGNAIIDYLKLARPKSKETYVFLRAKAPFTRLYSAAITSIVHKHLVHAGINIENRRHGAHALRHSLAGVLLEQRTTLPIISEVLGHGSTESTKYYLRIDSTSLKQCAL 403
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: UPI001FA826B3 (tyrosine-type recombinase/integrase n=1 Tax=Desulfotomaculum sp. OF05-3 TaxID=2305243 RepID=UPI001FA826B3) HSP 1 Score: 167 bits (423), Expect = 6.560e-50 Identity = 79/166 (47.59%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 4 GTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRALSSSIVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
G P G+R YAII + RLG+RASD+ L+FENI+W + I + Q+KT K ELPL DVG +I+ Y+K GRP N D++F+ H P ++S V + V H KAGI R HGAHALRHSLA +L + + VIS +LGH + ++M YLR+D+ LR+C +
Sbjct: 4 GNPGGRRDYAIILLIARLGLRASDVANLRFENINWETNKISFYQVKTKKQIELPLLKDVGESIIEYMKYGRPTCNSDHIFVRHRAPIHEFTASAVGSTVHRHLLKAGIKTEGRHHGAHALRHSLAGRLLENRIPLPVISEILGHSSTETTMAYLRVDIEQLRNCAL 169
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: A0A2A5GTU6_9FLAO (Integrase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2A5GTU6_9FLAO) HSP 1 Score: 174 bits (442), Expect = 6.960e-50 Identity = 86/168 (51.19%), Postives = 115/168 (68.45%), Query Frame = 1
Query: 1 KGTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRAL-SSSIVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
+ +PIGKR+YAII +A RLG+RASDI LKF + W+ I Q+KTGK ELP+ D+GNA+++Y+K GRP+S +VF+ P+ +S +VT VQ +RKAGIDV R GAH+LRHSL + ML E T + VIS V GH + S+ YYLRIDL S+R C++
Sbjct: 239 RSSPIGKRNYAIILLAARLGLRASDISRLKFTELHWDTSTIEIKQVKTGKELELPILPDIGNALIDYLKYGRPESESPFVFLIAKAPYAQFHTSQVVTHVVQRAYRKAGIDVKGRRFGAHSLRHSLGFRMLEESTALPVISEVFGHNSTESTRYYLRIDLKSMRQCML 406
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: UPI001F3B0C5F (tyrosine-type recombinase/integrase n=1 Tax=Bacteroides thetaiotaomicron TaxID=818 RepID=UPI001F3B0C5F) HSP 1 Score: 170 bits (430), Expect = 1.010e-49 Identity = 83/167 (49.70%), Postives = 115/167 (68.86%), Query Frame = 1
Query: 1 KGTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRALSSSIVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
+G GKR YA+I +A +LG+RASDIV LKFENI W LI+ +Q KTGK Q LPL ++GNAI+NY+K GRP S+E Y+F+ + P++ ++ T V + ++A ID + R HG HALRHS A ++L EKT + +IS LGH + S+MYYLRID +L+ C +
Sbjct: 84 QGDSKGKRDYAMILLATKLGLRASDIVALKFENILWEESLIKLSQQKTGKVQSLPLLPEIGNAIINYMKYGRPISDESYLFLQAHAPYQGITPHSFTKIVDFNIKRAKIDCTNRKHGPHALRHSFADNLLKEKTPMPIISEALGHSYTESTMYYLRIDTITLKQCAL 250
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: UPI00131CA1CC (tyrosine-type recombinase/integrase n=1 Tax=Parabacteroides pacaensis TaxID=2086575 RepID=UPI00131CA1CC) HSP 1 Score: 167 bits (423), Expect = 1.500e-49 Identity = 81/162 (50.00%), Postives = 114/162 (70.37%), Query Frame = 1
Query: 16 GKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRALSSSIVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
GKR YAI +A RLG+R+SDI LKFEN+DW+ ++I+ +Q +TGKY E+PL +DVGNAI+NY++ GRP S +VF+ P+ +S I + FR +GI++ R HG+HALRHSLA ML E T + VI+ +L H+ +NS+ YYLRID+ SL+ C +
Sbjct: 24 GKRDYAIFLLAARLGLRSSDIRLLKFENLDWDKNIIKLDQYRTGKYIEIPLLSDVGNAIVNYLQYGRPASESSFVFLEAIYPYATISQGI-SKIFSTIFRNSGINIEGRKHGSHALRHSLAVRMLKENTILSVITEILRHENTNSTKYYLRIDITSLKKCAL 184
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Match: A0A501QBX8_9FLAO (Integrase n=1 Tax=Flavobacterium microcysteis TaxID=2596891 RepID=A0A501QBX8_9FLAO) HSP 1 Score: 173 bits (438), Expect = 2.610e-49 Identity = 81/168 (48.21%), Postives = 120/168 (71.43%), Query Frame = 1
Query: 1 KGTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKYQELPLFADVGNAILNYVKNGRPKSNEDYVFISHNVPFRALSS-SIVTTEVQNHFRKAGIDVSKRSHGAHALRHSLAYHMLMEKTGIHVISSVLGHQGSNSSMYYLRIDLASLRHCVI 501
+ TP GKR+YAII + RLG+R SD+ LKFEN+DWN++LI Q KTGK LPL ++GNAI++Y+K GR +S+E +F+S P+ ++++ S +++ + + F+ +G+ + R G H+LRHSL Y +L E T + VIS +LGHQ + S+ YYLRIDL SLRHC++
Sbjct: 237 RSTPRGKRNYAIILLLARLGLRVSDVSNLKFENLDWNSNLISITQFKTGKNIVLPLLPEIGNAIIDYLKYGRAESDEKRIFLSCVSPYNSITTASAISSRIASVFKHSGVHIDGRKTGPHSLRHSLGYRLLQENTALPVISQILGHQNTQSTKYYLRIDLTSLRHCIL 404 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128016.5640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128016.5640.1 >prot_M-pyrifera_M_contig128016.5640.1 ID=prot_M-pyrifera_M_contig128016.5640.1|Name=mRNA_M-pyrifera_M_contig128016.5640.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp KGTPIGKRSYAIIFIAFRLGMRASDIVGLKFENIDWNNDLIRYNQIKTGKback to top mRNA from alignment at M-pyrifera_M_contig128016:2..502- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128016.5640.1 ID=mRNA_M-pyrifera_M_contig128016.5640.1|Name=mRNA_M-pyrifera_M_contig128016.5640.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig128016:2..502- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128016:2..502- >mRNA_M-pyrifera_M_contig128016.5640.1 ID=mRNA_M-pyrifera_M_contig128016.5640.1|Name=mRNA_M-pyrifera_M_contig128016.5640.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig128016:2..502- (Macrocystis pyrifera P11B4 male)back to top |