mRNA_M-pyrifera_M_contig127896.5618.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: A0A2V0P2X2_9CHLO (MYND-type domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P2X2_9CHLO) HSP 1 Score: 138 bits (348), Expect = 1.020e-37 Identity = 67/126 (53.17%), Postives = 80/126 (63.49%), Query Frame = 2
Query: 128 DEDMLRAYPLSPRVPTTNAECEALVAA-AQKCPLCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCGQHGVEPDCDAAADWRECKYCIGSITSGFSGTADALWRGLNSYNF 502
DEDML AYPL P +NA A A +CPLC KS+ + MT T+CC +CD+ EY LMS+SR+FC RSH RYTLCG HG E +CD + DWREC C+ F D LWRGLN+YNF
Sbjct: 81 DEDMLAAYPLRPSRLDSNARVRRPSAEEAPQCPLCLKSNGEVAMTRTQCCGNALCDTSGEYVLMSYSRDFCERSHDRYTLCGYHGEERECDKSKDWRECPRCL-----SFGQLPDRLWRGLNAYNF 201
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: A0A835XGG8_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XGG8_9CHLO) HSP 1 Score: 123 bits (309), Expect = 1.090e-32 Identity = 59/128 (46.09%), Postives = 72/128 (56.25%), Query Frame = 2
Query: 137 MLRAYPLSPRVPTTNAECEALVAAA------QKCPLCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCGQHGVEPDCDAAADWRECKYCIGSITSGFSGTADALWRGLNSYNF 502
ML +PL P P ++ A A +C LC K + + + T CC Q VCD+ +EYQLMS+SREFC RSH RYTLCG HG+E CD DWR C C G AD +WRGLN YN+
Sbjct: 1 MLARFPLRPHAPLCWSDPRAASRAGGPPPAGARCALCNKGAGEVRLMHTPCCAQVVCDNAEEYQLMSYSREFCSRSHERYTLCGYHGLERHCDRGPDWRHCPACAGRDGRPGRDEADRVWRGLNPYNY 128
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: A0A6A7FXJ7_9CRUS (MYND-type domain-containing protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FXJ7_9CRUS) HSP 1 Score: 122 bits (305), Expect = 3.570e-31 Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 2
Query: 128 DEDMLRAYPLSPRVPTTNAECEALVAAAQKCPLCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCGQHGVEPDCDAAADWRECKYCIGSITSGFSGTADALWRGLNSYNF 502
D++ML +PL+ ++ C+ +C +SK + T CC +CD+ YQ+MS+SREFC RSHSRYTLCG HGVEP+CD + DWR+C C+ S S AD +WRGLN YNF
Sbjct: 101 DQEMLAKFPLNGSGGSSTRSCD----------IC--TSKSNPLMETECCGNVLCDTAGRYQMMSYSREFCSRSHSRYTLCGHHGVEPECDESVDWRDCSGCLES----HSDLADTMWRGLNGYNF 209
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: A0A150G0C3_GONPE (MYND-type domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G0C3_GONPE) HSP 1 Score: 120 bits (300), Expect = 2.930e-30 Identity = 62/131 (47.33%), Postives = 82/131 (62.60%), Query Frame = 2
Query: 125 NDEDMLRAYPLSPRV----PTTNAECEALVAAAQKCPLCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCGQHGVEPDCDAAADWRECKYCIGS--ITSGFSGTADALWRGLNSYN 499
NDE ML +PL + P++ A +A+ A A C LCGK+S + + CC + VCD+E Y+ +FSR+FC RSH+RYTLCG HGVE +C DWR C C + +SG S T+D LWRGLN+YN
Sbjct: 71 NDEQMLERFPLGSALGHNTPSSAARPDAIPAGAC-CGLCGKTSAEETLGRAPCCGEVVCDNELRYRPGTFSRDFCLRSHARYTLCGHHGVERECARGLDWRVCPGCATAPAASSGASTTSDRLWRGLNAYN 200
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: A0A835SQA9_CHLIN (MYND-type domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SQA9_CHLIN) HSP 1 Score: 98.2 bits (243), Expect = 4.690e-22 Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 2
Query: 224 LCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCGQHGVEPDCDAAADWRECKYCIGSITSGFS-GTADALWRGLNSYNF 502
+CG +K +T T CC QPVC++ Y++ ++SR FC RSH RYTLCG HG E C+ DWR+C C +G S TA+ LW LN+YNF
Sbjct: 101 VCGLCAKGGALTTTSCCQQPVCNNSHRYRIGTYSRNFCLRSHDRYTLCGSHGQE-GCNTRRDWRDCNKCTREPRNGGSYDTANRLWLDLNTYNF 193
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: A0A7S3VGF5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGF5_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 6.490e-17 Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 2
Query: 140 LRAYPLS--PRVPTTNAECEALVAAAQKCPLCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCGQHGVEPDCDAAADWRECKYC 430
L YP+ P +TN+ A KC +C SS + +T T CC PVCD+ EYQ+MS+SR+FC RSH RYT C H E + DWR+C C
Sbjct: 191 LEKYPIGCFPVPSSTNSTEVKAKAGGAKCFVCHSSSLEVDITYTECCNLPVCDNSHEYQMMSYSRDFCQRSHDRYTSCASHCQE---EHKGDWRDCVEC 286
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: A0A383W5K5_TETOB (MYND-type domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W5K5_TETOB) HSP 1 Score: 81.3 bits (199), Expect = 7.390e-17 Identity = 40/81 (49.38%), Postives = 48/81 (59.26%), Query Frame = 2
Query: 128 DEDMLRAYPLSPRVPTTNAECEALVAAAQKCPLCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCG 370
DEDML A+PL + V A CP+CGK + Q +T T CC Q VCD+ YQ+ SFSR+ CPRS RYTLCG
Sbjct: 36 DEDMLAAFPLQSH-RAARSSTPPPVPAGASCPICGKGAGQAPLTRTPCCQQLVCDTNARYQIGSFSRDICPRSLQRYTLCG 115
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: A0A835YVW1_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVW1_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 6.750e-15 Identity = 46/138 (33.33%), Postives = 62/138 (44.93%), Query Frame = 2
Query: 128 DEDMLRAYPLSPRVPTTNAECEALVAAAQ------------KCPLCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCG-QHGVEPDCDAAADWRECKYCIGSITSGFSGTADALWRGLNSYNF 502
DE A L P +A+ L ++ +C +CG++ ++LT CC +C+ + EY+L S+SREFC RSH RYT CG HG A DWR C+ C D W N YNF
Sbjct: 35 DEAKESANTLQPAAAAADADATTLFLYSEGTLLPELRPNPPECGICGRTEP---LSLTPCCQNLICNRQHEYELFSYSREFCDRSHDRYTACGFHHGA----GHAGDWRTCERCAADFN-------DDYWYSNNGYNF 158
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: T0QN56_SAPDV (MYND-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QN56_SAPDV) HSP 1 Score: 78.2 bits (191), Expect = 4.030e-14 Identity = 47/134 (35.07%), Postives = 62/134 (46.27%), Query Frame = 2
Query: 125 NDEDMLRAYPLSP-RVPTTNAECEALVAAAQKCPLCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCGQHGVEPDCDAAADWRECKY--------CIGSITSGFSGTADALWRGLNSYN 499
N+ D L YP+ V TT+ E C +CG + + +T+CC VCD+E EYQ+MS+SR C RSH+RYT CG H E DWR C + C G G + W N +N
Sbjct: 145 NEADELTKYPIGCFPVETTDLET---------CFICGAGENEVNLGVTQCCGLTVCDNEHEYQMMSYSRTHCMRSHNRYTTCGSHANEGH--RHNDWRTCPHVDCAKQRECPDDERGGGGGRS---WYSTNGFN 264
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Match: A0A7S2RFB8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RFB8_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.330e-13 Identity = 42/123 (34.15%), Postives = 57/123 (46.34%), Query Frame = 2
Query: 131 EDMLRAYPLSPRVPTTNAECEALVAAAQKCPLCGKSSKQTGMTLTRCCFQPVCDSEDEYQLMSFSREFCPRSHSRYTLCGQHGVEPDCDAAADWRECKYCIGSITSGFSGTADALWRGLNSYN 499
E L+ YPL + E L C +CG + +T TRCC VCD+ EYQ+ S+SR+FC RSH YT+C H E + DWR C+ C + G + N +N
Sbjct: 181 EKQLKKYPLGCFPLPDPPKDETL-----SCFICGAGPDEVPLTFTRCCNAAVCDNTSEYQVFSYSRDFCHRSHCFYTVCASHFEEGH---SGDWRTCQDC--KVARAEEGEGSRSFSSTNGFN 293 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127896.5618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127896.5618.1 >prot_M-pyrifera_M_contig127896.5618.1 ID=prot_M-pyrifera_M_contig127896.5618.1|Name=mRNA_M-pyrifera_M_contig127896.5618.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp MLRAYPLSPRVPTTNAECEALVAAAQKCPLCGKSSKQTGMTLTRCCFQPVback to top mRNA from alignment at M-pyrifera_M_contig127896:1..502- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127896.5618.1 ID=mRNA_M-pyrifera_M_contig127896.5618.1|Name=mRNA_M-pyrifera_M_contig127896.5618.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=502bp|location=Sequence derived from alignment at M-pyrifera_M_contig127896:1..502- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127896:1..502- >mRNA_M-pyrifera_M_contig127896.5618.1 ID=mRNA_M-pyrifera_M_contig127896.5618.1|Name=mRNA_M-pyrifera_M_contig127896.5618.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig127896:1..502- (Macrocystis pyrifera P11B4 male)back to top |