mRNA_M-pyrifera_M_contig127790.5605.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: A0A6I6AI36_9PLAN (Type I-B CRISPR-associated protein Cas7/Cst2/DevR n=3 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AI36_9PLAN) HSP 1 Score: 295 bits (756), Expect = 6.200e-99 Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGLETMGVKAACASVLDRMSKLIGIEAQP 447
PVPYGCE+HATRYQYGMSLTPESLREKSRAASAI+ALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELI GVSDFESPLYQQLKNRGLETMGVKAACASVLDRMSKLIGIEAQP
Sbjct: 160 PVPYGCEVHATRYQYGMSLTPESLREKSRAASAIDALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELIGGVSDFESPLYQQLKNRGLETMGVKAACASVLDRMSKLIGIEAQP 308
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: A0A518FLP9_9PLAN (CRISPR-associated protein Cas7/Cst2/DevR n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FLP9_9PLAN) HSP 1 Score: 239 bits (609), Expect = 1.270e-76 Identity = 115/147 (78.23%), Postives = 134/147 (91.16%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGLETMGVKAACASVLDRMSKLIGIEA 441
PVPYG E+HATRYQ+G SLTPESLREKSRAA AIEALCHLG+VAGNQGRFL+DFSP+AVVFRLTHDPAPRILYCFESND GK+V VDQLL RLD+GDI+ EELICGVSD ES L QQL+NRG+E +GVKAAC+S+++RM++ + +EA
Sbjct: 160 PVPYGSEVHATRYQFGTSLTPESLREKSRAAKAIEALCHLGSVAGNQGRFLFDFSPEAVVFRLTHDPAPRILYCFESNDFGKSVCVDQLLTRLDTGDIKPEELICGVSDRESALAQQLQNRGIEPVGVKAACSSLINRMTQALEVEA 306
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: A0A7C4V951_9BACT (Type I-B CRISPR-associated protein Cas7/Cst2/DevR n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4V951_9BACT) HSP 1 Score: 187 bits (475), Expect = 1.950e-56 Identity = 89/146 (60.96%), Postives = 115/146 (78.77%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGLETMGVKAACASVLDRMSKLIGIE 438
PVPYG E+HATRYQYG++LTPE LR+K+RAA AIEALC+LGTVAGN GRFL+DFSPDAVVFR+T DPAPR+LY F + D GKT+ + LL +L++ D+ EELI GVSD +S L + G+ +GVKAACA + R+++ +GI+
Sbjct: 156 PVPYGTEVHATRYQYGIALTPERLRDKTRAAKAIEALCNLGTVAGNHGRFLFDFSPDAVVFRITQDPAPRLLYSFGTKDEGKTLHAENLLRKLEANDVTKEELILGVSDLQSELARSFAAVGVSPLGVKAACAEAVKRINQELGIK 301
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: A0A5K7X5I9_9BACT (CRISPR-associated negative autoregulator Cas7/Cst2 n=1 Tax=Lacipirellula parvula TaxID=2650471 RepID=A0A5K7X5I9_9BACT) HSP 1 Score: 183 bits (464), Expect = 8.880e-55 Identity = 87/146 (59.59%), Postives = 112/146 (76.71%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGLETMGVKAACASVLDRMSKLIGIE 438
PVPYG E+HATRYQYG++LTPE LR+KSRAA AI+ALC+LGTVAGN GRFL+DFSPD VV R+T DPAPR+LY F++ D+GKT++ D L+ R+DS DI +ELI G D +S L LK RG+ GVK AC ++R++ + I+
Sbjct: 156 PVPYGTEVHATRYQYGIALTPERLRDKSRAAKAIDALCNLGTVAGNHGRFLFDFSPDVVVLRITSDPAPRLLYSFDTTDNGKTLNADALVKRIDSKDINPKELILGAGDLDSKLVASLKARGVAVFGVKRACEEAVNRINAELKIK 301
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: A0A225DDL8_9BACT (CRISPR-associated autoregulator DevR family n=1 Tax=Fimbriiglobus ruber TaxID=1908690 RepID=A0A225DDL8_9BACT) HSP 1 Score: 177 bits (449), Expect = 1.750e-52 Identity = 87/146 (59.59%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGLETMGVKAACASVLDRMSKLIGIE 438
PVPYG E+HATRYQYG++LTP+ LR+K+RAA AI+ALC+LGTVAGN GRFL+DFSPDAVV R+T DPAPR+LYCF++ D GKTV +LL RL + D+ +ELI GVSD E L LK R + GVK AC + R++ + I+
Sbjct: 159 PVPYGTEVHATRYQYGIALTPDRLRDKTRAAKAIDALCNLGTVAGNHGRFLFDFSPDAVVLRVTQDPAPRLLYCFDTTDDGKTVVSPKLLQRLAAEDLDPKELIVGVSDLECKLAADLKARQVPVYGVKKACEEAVKRITAELKIK 304
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: UPI001EE8EDD8 (type I-B CRISPR-associated protein Cas7/Cst2/DevR n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE8EDD8) HSP 1 Score: 164 bits (415), Expect = 2.330e-47 Identity = 76/146 (52.05%), Postives = 108/146 (73.97%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGL-ETMGVKAACASVLDRMSKLIGI 435
PVPYG E+HATRYQ+G++LTPE LR+KSRAA A+EA+ L TVAGN GRFL+DFSP+A++ R+T DPAPR+LYCF S+D G TV+ L+ R++ GD+ +EL+ GVSD +S L Q L++ G+ + GV+ A + + + + +
Sbjct: 161 PVPYGTEVHATRYQFGLALTPERLRDKSRAAKALEAVGSLRTVAGNHGRFLFDFSPEAIIIRITRDPAPRLLYCFNSDDSGATVTASALIKRIEVGDVLADELVVGVSDLDSELSQSLRDNGVSQVSGVRGAIQIACESLQQSLNV 306
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: A0A7V5UJF3_9PLAN (Type I-B CRISPR-associated protein Cas7/Cst2/DevR n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7V5UJF3_9PLAN) HSP 1 Score: 160 bits (404), Expect = 1.040e-45 Identity = 80/147 (54.42%), Postives = 109/147 (74.15%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGLETM--GVKAACASVLDRMSKLIGI 435
PVPYG E+HATRYQ+G++LTP+ LR+ SRAA AI A+ L +VAGN GRFL+DFSP+A+V R+T DPAPR+LYCFES+D GKTVS L+AR+ SGDI ELI G + +QL+ G+E++ GVK+A + +R++ +G+
Sbjct: 158 PVPYGTELHATRYQFGLALTPQRLRDPSRAAKAIRAVGSLRSVAGNHGRFLFDFSPEAIVVRITDDPAPRLLYCFESDDDGKTVSAPSLVARVRSGDIAPSELIVGGAIASGETGEQLRECGVESISEGVKSAIDAACERINNQLGV 304
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: A0A3L7UQT0_9BACT (Type I-B CRISPR-associated protein Cas7/Cst2/DevR n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7UQT0_9BACT) HSP 1 Score: 158 bits (400), Expect = 3.570e-45 Identity = 74/131 (56.49%), Postives = 97/131 (74.05%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGLETMGVKAA 393
PVPYG E+HATRYQYG+++TPE LR+K RA A++ + L TVAGN GRFL+DFSP+ +VFR+T DPAPR+LYCF++ D GKTVS LL R+ +GD+ EELI G D + L ++ K + +GVKAA
Sbjct: 157 PVPYGTEVHATRYQYGIAMTPERLRQKERAIVALQGISSLRTVAGNHGRFLFDFSPEVIVFRITDDPAPRLLYCFDTPDDGKTVSALALLKRIQNGDVAPEELIVGTGDVDDSLSREFKKLKVAVLGVKAA 287
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: UPI001423A624 (type I-B CRISPR-associated protein Cas7/Cst2/DevR n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001423A624) HSP 1 Score: 158 bits (399), Expect = 5.720e-45 Identity = 78/147 (53.06%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGL-ETMGVKAACASVLDRMSKLIGIE 438
PVPY E+HATRYQYG+++TP +L++ SRAA A+EA+ LGTVAGN RFL+DF+PDA+V RLT+DPAPR+LYCFE + GKTV V L ++++GDI+ +ELI GVSD +PL L+ G+ E GV+ A R+++ G++
Sbjct: 158 PVPYMAEIHATRYQYGLAMTPAALQKPSRAAKALEAVGELGTVAGNHARFLFDFAPDAIVIRLTNDPAPRLLYCFEPAEGGKTVRVSPLTKKMEAGDIRPDELIVGVSDLNAPLVDSLRIAGVTEIHGVRNAVELAARRINEHSGVK 304
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Match: A0A5C6E2H7_9BACT (CRISPR-associated protein Cas7/Cst2/DevR n=2 Tax=Novipirellula TaxID=2795426 RepID=A0A5C6E2H7_9BACT) HSP 1 Score: 154 bits (389), Expect = 1.670e-43 Identity = 76/143 (53.15%), Postives = 103/143 (72.03%), Query Frame = 1
Query: 1 PVPYGCEMHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDAVVFRLTHDPAPRILYCFESNDHGKTVSVDQLLARLDSGDIQIEELICGVSDFESPLYQQLKNRGLETM-GVKAACASVLDRMSKL 426
PVPYG E+HATRYQYG+++TP+ LR+ RAA A++A+ +L TVAGN GRFL+DFSP A+VFR+T DPAPR+LYCF + D G T+S D+L+ R+ SGDI ELI G + + L G + G+KAA +V DR++K+
Sbjct: 158 PVPYGAEIHATRYQYGIAMTPDRLRQSDRAAKALQAIANLRTVAGNHGRFLFDFSPAAIVFRVTEDPAPRLLYCFGTPDAGHTLSADELVRRVKSGDINASELIVGGELATTDSGKALAELGADVKDGIKAATQAVCDRIAKV 300 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127790.5605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127790.5605.1 >prot_M-pyrifera_M_contig127790.5605.1 ID=prot_M-pyrifera_M_contig127790.5605.1|Name=mRNA_M-pyrifera_M_contig127790.5605.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp MHATRYQYGMSLTPESLREKSRAASAIEALCHLGTVAGNQGRFLYDFSPDback to top mRNA from alignment at M-pyrifera_M_contig127790:53..502- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127790.5605.1 ID=mRNA_M-pyrifera_M_contig127790.5605.1|Name=mRNA_M-pyrifera_M_contig127790.5605.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig127790:53..502- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127790:53..502- >mRNA_M-pyrifera_M_contig127790.5605.1 ID=mRNA_M-pyrifera_M_contig127790.5605.1|Name=mRNA_M-pyrifera_M_contig127790.5605.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig127790:53..502- (Macrocystis pyrifera P11B4 male)back to top |