mRNA_M-pyrifera_M_contig126437.5324.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: A0A358SQD2_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A358SQD2_9ACTN) HSP 1 Score: 163 bits (412), Expect = 9.340e-44 Identity = 100/172 (58.14%), Postives = 123/172 (71.51%), Query Frame = 1
Query: 1 SGPGSLRAAIASANSS---RGTRIEFAVSGTIALGTALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAAGAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDGAAQGNRGPGVLVSRGSSGNRIGLNPTGCSGVVGNVISGNAGHGIVMRGATRNTVV 507
SGPGSLRAAI SA+ + T I F+V G I L TALPA+T R TID T+APGY +GG PV+ +D + GL FAAG+AGSQLLGV+V DA G GVTL+A IT+N +Y+GL+ G A GN G G+ VS SS N +GLN +G SG V NVISGN G+GI + G++ NTVV
Sbjct: 97 SGPGSLRAAIQSADMAPPRTSTIISFSVHGVITLATALPAVTSRVTIDATSAPGYQSGGPPVVEIDCHGQAGLDFAAGSAGSQLLGVAVDDASGNGVTLNAGSITINHDYIGLDLGGMALGNDGDGIYVSAASSRNLLGLNSSGDSGAVANVISGNLGNGITLSGSSGNTVV 268
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: UPI00131BBC9D (hypothetical protein n=1 Tax=unclassified Acidisoma TaxID=2634065 RepID=UPI00131BBC9D) HSP 1 Score: 151 bits (381), Expect = 3.230e-39 Identity = 96/172 (55.81%), Postives = 120/172 (69.77%), Query Frame = 1
Query: 1 SGPGSLRAAIASANSSR-GTR--IEFAVSGTIALGTALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAAGAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDGAAQGNRGPGVLVSRGSSGNRIGLNPTGCSGVVGNVISGNAGHGIVMRGATRNTVV 507
SG GSLRAAI +AN++ GT+ I+FAVSGT+AL + LP I R ID TTAPG+ GGAP + L+ GL FA G+ SQLLGV++ DA G GVTLD+ ITL NY+GLN G A GN G G+ VS S+ + IG NPT SGV+ NV+SGNAG+GIV+ G+ NT+V
Sbjct: 12 SGTGSLRAAIVAANAAPIGTQSTIDFAVSGTVALQSDLPPIARSVVIDATTAPGHQTGGAPSVELNCNGNAGLVFAPGSDNSQLLGVALGDASGNGVTLDSSAITLAGNYIGLNLQGTAFGNGGDGIHVSATSANDIIGSNPTAASGVISNVVSGNAGNGIVLDGSFGNTLV 183
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: A0A3C1DKL2_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3C1DKL2_9ACTN) HSP 1 Score: 134 bits (336), Expect = 2.670e-33 Identity = 82/170 (48.24%), Postives = 107/170 (62.94%), Query Frame = 1
Query: 4 GPGSLRAAIASAN---SSRGTRIEFAVSGTIALGTALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAAGAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDGAAQGNRGPGVLVSRGSSGNRIGLNPTGCSGVVGNVISGNAGHGIVMRGATRNTV 504
G G+LRAAI + N SS T I FA +GT+ L LPAI + IDGTTAPGY GGAPV+ ++ LR G+ GSQ+L +SV ++ G G+TL + TLN NYVGL G A GNRG G+ ++R + N+IGLNPT V NV+SGN G GI + G++ N +
Sbjct: 69 GGGTLRAAINAVNRQSSSTTTTITFAKAGTVKLKRDLPAIKNKVVIDGTTAPGYVTGGAPVVGINGNGHTTLRLDPGSGGSQILALSVTNSSGNGITLASGSNTLNYNYVGLTTGGKASGNRGDGIFLARTAKKNKIGLNPTNTPSAVANVVSGNRGAGIRLIGSSLNKI 238
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: UPI001E4DBFEC (hypothetical protein n=2 Tax=Reyranella TaxID=445219 RepID=UPI001E4DBFEC) HSP 1 Score: 133 bits (335), Expect = 5.030e-33 Identity = 81/170 (47.65%), Postives = 113/170 (66.47%), Query Frame = 1
Query: 4 GPGSLRAAIASANSSRGTR--IEFAVSGTIALGTALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAAGAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDGAAQGNRGPGVLVSRGSSGNRIGLNPTGCSGVVGNVISGNAGHGIVMRGATRNTVV 507
GPGSLRAAI + NS+ I F V+G I L ++LP I + T+DG TAPG+AA G P + ++ G GL F+ G++GS + G+++ ++ G+TL++ ITLNANY+G++ DG+A GN G+ V+ SSGN IGLNP V NVISGN G+GI G++ NTVV
Sbjct: 13 GPGSLRAAITALNSTNAASNSIVFTVAGEIVLASSLPTILKPVTLDGMTAPGFAALGVPTVEINFGGNSGLTFSGGSSGSAVFGLALGNSGSNGITLNSSDITLNANYIGIHADGSAFGNALDGIHVNSTSSGNLIGLNPESHPDTVTNVISGNGGNGIAFWGSSGNTVV 182
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: A0A1U7GFN1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium 71-10 TaxID=1895807 RepID=A0A1U7GFN1_9BACT) HSP 1 Score: 128 bits (322), Expect = 2.010e-31 Identity = 90/172 (52.33%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 4 GPGSLRAAIASANSSRGT-RIEFAVSGTIALG-TALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAAGAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDGAA-QGNRGPGVLVSRGSSGNRIGLNPTGCSGV--VGNVISGNAGHGIVMRGATRNTV 504
GPGSLR AI ANSS G I+FAV GTI G +ALPAIT TTIDGT+APG+A GAPV+ +D RGLRFA GA GS L +S+V + G GVTLDA +T+ NY+GL DG+ NRG GV ++ GS GN IG G + NVISGN G G+ + G + + +
Sbjct: 39 GPGSLRWAIVQANSSPGPDEIDFAVPGTIKAGRSALPAITGPTTIDGTSAPGFA--GAPVVTVDLQGARGLRFARGADGSTLSSLSIVRSGGDGVTLDASNVTVQGNYIGLLADGSTIAANRGDGVRINAGSRGNLIGREDPGTPQAFQLSNVISGNGGDGVGVYGGSDSRI 208
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: A0A521R5W9_9HYPH (Peptidase S53 domain-containing protein n=2 Tax=Reyranella TaxID=445219 RepID=A0A521R5W9_9HYPH) HSP 1 Score: 123 bits (309), Expect = 1.670e-29 Identity = 84/181 (46.41%), Postives = 109/181 (60.22%), Query Frame = 1
Query: 1 SGPGSLRAAIASANSSRG---TRIEFAVSGTIALGTALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAAGAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDGAAQGNRGPGVLVSRGSSGNRIGLNPTG---------CSGVVGNVISGNAGHGIVMRGATRNTVV 507
SG GSLRAAI ++N+ IEF V+GTI L + LP++T+ I A A G P + +D GL FAAG+ GS+L+G+S+ +A G GVTL A GITLN NY+GL +G+A GN G GV V+ SSGN +G NP +GVV NVIS N G+GI + GA N +V
Sbjct: 12 SGAGSLRAAIEASNAEPAGVTNTIEFTVTGTIVLASGLPSLTKPVDI---VAGNPATGNPPTVGIDFNGNAGLVFAAGSEGSELVGLSLGNAAGNGVTLHAGGITLNNNYIGLALNGSAAGNTGDGVFVAATSSGNNLGFNPEATTLAENGQPATGVVSNVISANGGNGITLNGADNNEIV 189
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: UPI0013ECA1BF (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI0013ECA1BF) HSP 1 Score: 105 bits (261), Expect = 4.360e-23 Identity = 67/138 (48.55%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 1 SGPGSLRAAIASANSSRGT-RIEFAVSGTIAL-GTALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAAGAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDGAAQGNRGPGVLVSRGSSGNRIG 408
SG GSLR A+ SAN GT IEF V+GTI + G +LPA+T T+DG+TAP +A G PV+ +D G RGLRF G+ GS L + ++ A GVTL+A +T+ N++GL DG GNRG G+ ++ S GN IG
Sbjct: 54 SGEGSLRWAMTSANDRPGTDTIEFRVAGTIRVAGRSLPALTGTVTLDGSTAPSFA--GTPVVTIDFGGTRGLRFEGGSDGSSLTSLVLIRAGNAGVTLNASHVTVQQNWIGLGADGRVAGNRGDGIRINASSQGNLIG 189
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: UPI0018803F82 (hypothetical protein n=1 Tax=Synechocystis sp. LEGE 06083 TaxID=915336 RepID=UPI0018803F82) HSP 1 Score: 99.0 bits (245), Expect = 9.920e-23 Identity = 76/166 (45.78%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 1 SGPGSLRAAIASANSSRGTR-IEFAVSGTIALGTALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAA----GAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDG-AAQGNRGPGVLVSRGSSGNRIGLNPTGCSGV--VGNVISGNAGHGI 474
SG GSLR AI AN + G I FAV+G+I L +ALP I TIDGTTAPG+ G P++A++ GL+F AAGSQLLG+ ++D+ GVT++ D IT+ NY+G++ DG A+GN+G G+ + +S + IG + SG + NVISGN G+GI
Sbjct: 12 SGAGSLRQAILDANLNPGADVISFAVTGSINLLSALPDIIDTLTIDGTTAPGF--DGNPLVAINFNNNPGLKFTNFNGNSAAGSQLLGLGIIDSSTNGVTVEVDNITIQGNYIGVDLDGQTARGNQGNGIFLGTQTSQHLIGTTSS-VSGQFQLSNVISGNQGNGI 174
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: UPI001881AA75 (DUF4114 domain-containing protein n=3 Tax=Synechocystis TaxID=1142 RepID=UPI001881AA75) HSP 1 Score: 103 bits (257), Expect = 1.500e-22 Identity = 78/176 (44.32%), Postives = 110/176 (62.50%), Query Frame = 1
Query: 1 SGPGSLRAAIASANSSRGTR-IEFAVSGTIALGTALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAA----GAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDG-AAQGNRGPGVLVSRGSSGNRIGLNPTGCSGV--VGNVISGNAGHGIVMRGATRNTV 504
SG GSLR AI AN + G I FAV+G+I L +ALP I TIDGTTAPG+ G P++A++ GL+F AAGSQLLG+ ++D+ GVT++ D IT+ NY+G++ DG A+GN+G G+ + +S + IG + SG + NVISGN G+GI + G+ N +
Sbjct: 12 SGAGSLRQAILDANLNPGADVISFAVTGSINLLSALPDIIDTLTIDGTTAPGF--DGNPLVAINFNNNPGLKFTNFNGNSAAGSQLLGLGIIDSSTNGVTVEVDNITIQGNYIGVDLDGQTARGNQGNGIFLGTQTSQHLIGTTSS-VSGQFQLSNVISGNQGNGIRLAGSANNRI 184
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Match: UPI001665E1FE (right-handed parallel beta-helix repeat-containing protein n=2 Tax=Roseomonas TaxID=125216 RepID=UPI001665E1FE) HSP 1 Score: 103 bits (257), Expect = 1.610e-22 Identity = 76/167 (45.51%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 1 SGPGSLRAAIASANSSRGT---RIEFAVSGTIALGTALPAITRRTTIDGTTAPGYAAGGAPVIALDNGARRGLRFAAGAAGSQLLGVSVVDARGPGVTLDADGITLNANYVGLNPDGAAQGNRGPGVLVSRGSSGNRIGLNPTGCS---------GVVGNVISGNAG 465
SG GSLRAAI ++N++ IEF+VSGTI L + LP +T +I A A G AP + +D GL F G+AGSQL+G+S+ +A G GVTL A I LN NY+GL DG A GN G G+ ++ SS N IG NP + GV+ NVIS N G
Sbjct: 12 SGEGSLRAAIEASNAAPPNVPNTIEFSVSGTILLASDLPHVTNTVSI---IAGDTATGNAPTVGIDFNQHAGLVFEPGSAGSQLIGLSLGNADGDGVTLSAGSILLNNNYIGLALDGTALGNSGDGISIAATSSANLIGYNPDAAALAAAGSPSAGVISNVISANGG 175 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126437.5324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126437.5324.1 >prot_M-pyrifera_M_contig126437.5324.1 ID=prot_M-pyrifera_M_contig126437.5324.1|Name=mRNA_M-pyrifera_M_contig126437.5324.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp SGPGSLRAAIASANSSRGTRIEFAVSGTIALGTALPAITRRTTIDGTTAPback to top mRNA from alignment at M-pyrifera_M_contig126437:3..509+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126437.5324.1 ID=mRNA_M-pyrifera_M_contig126437.5324.1|Name=mRNA_M-pyrifera_M_contig126437.5324.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig126437:3..509+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126437:3..509+ >mRNA_M-pyrifera_M_contig126437.5324.1 ID=mRNA_M-pyrifera_M_contig126437.5324.1|Name=mRNA_M-pyrifera_M_contig126437.5324.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig126437:3..509+ (Macrocystis pyrifera P11B4 male)back to top |