mRNA_M-pyrifera_M_contig126157.5274.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A3D5DGF7_9GAMM (Ammonium transporter n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DGF7_9GAMM) HSP 1 Score: 235 bits (600), Expect = 9.890e-74 Identity = 118/152 (77.63%), Postives = 136/152 (89.47%), Query Frame = 1
Query: 4 ISTFLMLSV--CGNAQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIGLGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
+ TFLML++ C NA AD L+SGDTAW+LTSTALVLFMTLPGLALFYGGLVR+KNALSVLMQCF + CLMS+ WL+ GYGLAFGDGG L ++IGLGN MLS+V+R+AV GT+P+SVFVMFQMTFAVITPALIVGAF ERMRF+AVLLFS+ W
Sbjct: 7 VMTFLMLAIGCCANASADDLNSGDTAWLLTSTALVLFMTLPGLALFYGGLVRSKNALSVLMQCFTVGCLMSMAWLIVGYGLAFGDGGDLQRFIGLGNIMLSEVSRDAVHGTIPKSVFVMFQMTFAVITPALIVGAFVERMRFSAVLLFSLFW 158
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A523P505_9PROT (Ammonium transporter (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P505_9PROT) HSP 1 Score: 229 bits (584), Expect = 1.920e-72 Identity = 115/147 (78.23%), Postives = 129/147 (87.76%), Query Frame = 1
Query: 13 FLMLSVCGNAQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIGLGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
FL + +C + A +DSGDTAW+LTST LVLFMTLPGLALFY GLVR KN LSVLMQCFA+ CLMSL+WLVAGYGLAFGDGG+ + IGLGN MLSDVTR AV+GT+PESVFVMFQMTFA+ITPALI+GAFAERMRF+AVLLFS LW
Sbjct: 12 FLTVGLCVDVHAAAIDSGDTAWLLTSTVLVLFMTLPGLALFYAGLVRTKNVLSVLMQCFALACLMSLVWLVAGYGLAFGDGGTWQKIIGLGNIMLSDVTRGAVNGTIPESVFVMFQMTFAIITPALIIGAFAERMRFSAVLLFSTLW 158
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A661BZA4_9GAMM (Ammonia channel protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BZA4_9GAMM) HSP 1 Score: 215 bits (547), Expect = 2.920e-68 Identity = 107/152 (70.39%), Postives = 135/152 (88.82%), Query Frame = 1
Query: 1 IISTFLMLSVCGNAQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIG-LGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
+++ ++L + AQAD LD+GDTAW+LTSTALVLFMTLPGLALFYGGLVRAKN LSVLMQCFAI C++S+LW++ GY L+FGDGGS+N +IG L N L++VTR+++SGT+PESVFVMFQMTFA+ITPALI+G FAERM+F+A+LLFSV+W
Sbjct: 7 MVTAVMLLLLPVVAQADTLDTGDTAWILTSTALVLFMTLPGLALFYGGLVRAKNVLSVLMQCFAIACIVSILWVIYGYSLSFGDGGSMNAWIGGLDNAFLANVTRDSLSGTLPESVFVMFQMTFAIITPALIIGGFAERMKFSAMLLFSVIW 158
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A382SLZ4_9ZZZZ (Ammonium_transp domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382SLZ4_9ZZZZ) HSP 1 Score: 210 bits (534), Expect = 3.150e-65 Identity = 104/136 (76.47%), Postives = 121/136 (88.97%), Query Frame = 1
Query: 46 ADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIGLGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
AD LD+GDTAW+L STALVLFMTLPGLALFY GLVRAKN LSVLMQCFAI CL+S+LW+V YGLAFGDGGS+NQ +GLGN M+SDV +++SGT+PE VF MFQMTFA+ITPALI+G FAERM+F++VLLFS LW
Sbjct: 21 ADELDTGDTAWILVSTALVLFMTLPGLALFYSGLVRAKNVLSVLMQCFAIACLVSILWMVFVYGLAFGDGGSVNQIVGLGNLMISDVGMDSMSGTIPEIVFFMFQMTFAIITPALIIGGFAERMKFSSVLLFSALW 156
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A849MJ29_9PROT (Ammonium transporter n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MJ29_9PROT) HSP 1 Score: 213 bits (542), Expect = 4.420e-65 Identity = 108/147 (73.47%), Postives = 126/147 (85.71%), Query Frame = 1
Query: 13 FLMLSVCGNAQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIGLGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
F++ + G AD L++GDTAW+LTSTALVLFMTLPGLALFY GLVRAKN LSVLMQCFAI CL+S+LWL+ YGLAFGDGGSLNQ+IGLGN M S VT +A++GT+PE VF MFQMTFA+ITPALIVG FAERM+F+AVL FS +W
Sbjct: 7 FILAMLPGVVFADELNTGDTAWILTSTALVLFMTLPGLALFYSGLVRAKNVLSVLMQCFAIACLVSILWLIGVYGLAFGDGGSLNQFIGLGNIMASAVTVDAMNGTIPEVVFFMFQMTFAIITPALIVGGFAERMKFSAVLWFSAIW 153
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A2A5G8X7_9GAMM (Ammonium transporter n=2 Tax=root TaxID=1 RepID=A0A2A5G8X7_9GAMM) HSP 1 Score: 213 bits (541), Expect = 7.090e-65 Identity = 108/152 (71.05%), Postives = 132/152 (86.84%), Query Frame = 1
Query: 1 IISTFLMLSVCGNAQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIG-LGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
IIS ++L + AQADGLDSGDTAW+LTSTALVLFMTLPGLALFYGGLVR KN LSVLMQCF I C++S++W+V GY L+FG GGS+N +IG L N L++VTR+++SGT+PES FVMFQMTFA+ITPALIVG FAERM+F+++LLFSV+W
Sbjct: 7 IISACVLLLIPVIAQADGLDSGDTAWILTSTALVLFMTLPGLALFYGGLVRTKNVLSVLMQCFMIACVVSIIWVVYGYSLSFGHGGSMNAWIGGLDNAFLANVTRDSLSGTLPESTFVMFQMTFAIITPALIVGGFAERMKFSSMLLFSVIW 158
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A3B0W4R3_9ZZZZ (Ammonium transporter n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0W4R3_9ZZZZ) HSP 1 Score: 211 bits (537), Expect = 3.030e-64 Identity = 104/139 (74.82%), Postives = 127/139 (91.37%), Query Frame = 1
Query: 40 AQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIG-LGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
A+A+G+DSGDTAW+LTSTALVLFMTLPGLALFYGGLVR KN LSVLMQCF I C++S+LW+V GY L+FGDGGS+N ++G L N L++VTRE++SGT+PESVFVMFQMTFA+ITPALI+G FAERM+F+++LLFSVLW
Sbjct: 23 ARAEGVDSGDTAWILTSTALVLFMTLPGLALFYGGLVRTKNVLSVLMQCFMIACVVSILWVVYGYSLSFGDGGSMNAWVGGLDNAFLANVTRESLSGTLPESVFVMFQMTFAIITPALIIGGFAERMKFSSMLLFSVLW 161
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A7C5KZJ3_9GAMM (Ammonium transporter n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A7C5KZJ3_9GAMM) HSP 1 Score: 210 bits (534), Expect = 7.350e-64 Identity = 104/139 (74.82%), Postives = 126/139 (90.65%), Query Frame = 1
Query: 40 AQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIG-LGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
AQA+G DSGDTAW+LTSTALVLFMTLPGLALFYGGLVRAKN LSVLMQCF I C++S++W+V GY L+FGDGGS+N +IG L N L++VTR+++SGT+PES FVMFQMTFA+ITPALI+G FAER++F+A+LLFSVLW
Sbjct: 17 AQAEGSDSGDTAWILTSTALVLFMTLPGLALFYGGLVRAKNVLSVLMQCFVIACVVSIIWVVYGYSLSFGDGGSMNAWIGGLDNAFLANVTRDSLSGTLPESAFVMFQMTFAIITPALIIGGFAERIKFSAMLLFSVLW 155
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A2E6HNJ1_9GAMM (Ammonium transporter n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E6HNJ1_9GAMM) HSP 1 Score: 210 bits (534), Expect = 9.650e-64 Identity = 104/147 (70.75%), Postives = 125/147 (85.03%), Query Frame = 1
Query: 13 FLMLSVCGNAQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIGLGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
F+ + A AD L+SGDTAW+LTSTALVLFMTLPGLALFY GLVRAKN LSVLMQCF+I CL+S+LW+V GYGLAFGDGGS+NQ +GLGN M+SDV ++ SGT+PE +F MFQMTFA+ITPAL+VG FAERM+F++VL F+ LW
Sbjct: 21 FITMFAPSLALADELNSGDTAWILTSTALVLFMTLPGLALFYSGLVRAKNVLSVLMQCFSIACLVSILWMVFGYGLAFGDGGSINQIVGLGNIMISDVGLDSASGTIPEILFFMFQMTFAIITPALVVGGFAERMKFSSVLWFTALW 167
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Match: A0A1Z9UCI0_9GAMM (Ammonium transporter n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UCI0_9GAMM) HSP 1 Score: 209 bits (533), Expect = 1.010e-63 Identity = 109/151 (72.19%), Postives = 127/151 (84.11%), Query Frame = 1
Query: 1 IISTFLMLSVCGNAQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALSVLMQCFAICCLMSLLWLVAGYGLAFGDGGSLNQYIGLGNFMLSDVTREAVSGTMPESVFVMFQMTFAVITPALIVGAFAERMRFAAVLLFSVLW 453
+I FL+L A ADGLDSGD AW+LTSTALVLFMT+PGLALFYGGLVR+KNALSVLMQCF + C+ SLLW+ AGYGLAFG+GG+ N Y G G MLS VTREA+SGT+PE+VFVMFQMT A+ITPALIVG FAERM+F+A+L+FS W
Sbjct: 6 LIVIFLLLPSV--AFADGLDSGDGAWLLTSTALVLFMTIPGLALFYGGLVRSKNALSVLMQCFTLTCVTSLLWVFAGYGLAFGNGGAWNDYXGGGXVMLSXVTREAMSGTIPETVFVMFQMTXAIITPALIVGGFAERMKFSAILVFSCXW 154 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126157.5274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126157.5274.1 >prot_M-pyrifera_M_contig126157.5274.1 ID=prot_M-pyrifera_M_contig126157.5274.1|Name=mRNA_M-pyrifera_M_contig126157.5274.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp MLSVCGNAQADGLDSGDTAWMLTSTALVLFMTLPGLALFYGGLVRAKNALback to top mRNA from alignment at M-pyrifera_M_contig126157:9..461- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126157.5274.1 ID=mRNA_M-pyrifera_M_contig126157.5274.1|Name=mRNA_M-pyrifera_M_contig126157.5274.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig126157:9..461- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126157:9..461- >mRNA_M-pyrifera_M_contig126157.5274.1 ID=mRNA_M-pyrifera_M_contig126157.5274.1|Name=mRNA_M-pyrifera_M_contig126157.5274.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig126157:9..461- (Macrocystis pyrifera P11B4 male)back to top |