mRNA_M-pyrifera_M_contig1256.5180.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: A0A6H5JJQ2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ2_9PHAE) HSP 1 Score: 582 bits (1500), Expect = 7.140e-198 Identity = 378/678 (55.75%), Postives = 439/678 (64.75%), Query Frame = 1
Query: 34 QSLGRLCARALQVHPRNAGLWIKAASWEFFDGGNASSARALMQRGLRINPTAQNLWLQYFRLEFSYIKKLMGRREVLGLDNGAGGGVEEGGGQQ------REGMDIPLLEGEQGEQENAGPSFEAVQKATTEEEAVAAGVAAAGSGGARPAPVMNATARGFYKGSVPLAVFRAAVKAVPEDVEFRAGFLRCCAVDFPDVSREAAEAILGSIAQDFPENCEAWEVRASYPLLVAEGEGAKGGXXXXXXGLGPAM-QECIGTFELAVGAIGVREPAMWVRYASFLKRRLESGQGGVGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQVLARAVETHLC---VSSDSPALATTGARKQAASVTAAGGGAAGAELAHRAAVESLAEDA----EDAREALSAGLADVLLAMGKPDSALEALCAATASRLSCRAGPWLRRAALERRLHALGGSQPVTPNLLKGRRLNNANAAVGGWGGGWGRSTPSKVGPAPDDGFGLAVETLRSGIRAVPSTSPGYPSLWRELLASLMAVGAG-----KKAISEAFRGAAEACDPSGGADQGVAQGEFLAGYLRWSVAVGGIEAARGAFQWARRSFLLAGTGAAAVHREAIELEMALGWTGGKRGEERAKRVRELFEDASDKFGKKLPGIWEEYARFEVQEGDVKRVNAVRWRAQQQ 2010
Q+LGRL ARALQ+HPRN GLWIKAASWEFFDGGN SSAR+LMQRGLRINP A+NLWLQYFRLEFSY++KLMGRRE+LGL+ GG + G G R GMDIP LE E G+ + GPSF+AV+KA E A+ G GARPAPVMN TAR FYKG+VP+AVFRAAVKAVP DV FRAGFLRCCA DFP +S EAA++IL S+ +DFP++CEAWEVRASYP L AE A LG A+ QE + TFELAV A+G +P MWVRYASFL+ RLE+ +G G + XXXXXXX ++VLAR+VE HL +D A+ GG + A A E L + ED+REALSAGLADV LA+G+P+ AL AL AAT L R GPWLRRAALERRL ALGG G +A TLR+GI+AV +PGYP LWRELLASL+A GAG K A++ AFR A EAC GG+ AQGEFLAGY+RWS AV G +AAR A QWARRSFLL GTGAAA + EAIELE ALG G+ G RAKRVRELFED+ DKFG++LP IWEEYA+FE+QEG+VKR NAVRWR+QQQ
Sbjct: 4 QALGRLFARALQLHPRNPGLWIKAASWEFFDGGNTSSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLEAERGGAGDNGQGNDXXXXGGRRGMDIPELEAEAGQ--SGGPSFKAVRKAAGAEGALG------GDDGARPAPVMNDTARRFYKGAVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSMERDFPDSCEAWEVRASYPQLAAEAAAA----GRDAGRLGSAVVQESLDTFELAVEAVGASQPDMWVRYASFLRGRLEACEGAKGRKRGGGAVDGGKGGEMVGASAPXXXXXXXLAARLREVLARSVEIHLAGGAAPNDPXXXXXXXXXXXIAARKERGGASLLATRGVSAPAEGLEAPSRRREEDSREALSAGLADVCLALGEPEEALAALRAATGV-LPRRPGPWLRRAALERRLAALGGDPGQAGRPASGXXXXXXXXXXX---------------XXXXXXADVAAATLRAGIKAVSPAAPGYPDLWRELLASLVASGAGHSKKGKTAVAAAFREAVEAC--GGGSAGNNAQGEFLAGYVRWSAAVEGPDAARRALQWARRSFLLTGTGAAAAYGEAIELERALGEEAGEEGT-RAKRVRELFEDSVDKFGRELPAIWEEYAQFEIQEGNVKRANAVRWRSQQQ 650
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: A0A835YXJ8_9STRA (U3 small nucleolar RNA-associated protein 6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ8_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.420e-57 Identity = 128/281 (45.55%), Postives = 171/281 (60.85%), Query Frame = 1
Query: 40 LGRLCARALQVHPRNAGLWIKAASWEFFDGGNASSARALMQRGLRINPTAQNLWLQYFRLEFSYIKKLMGRREVLGL---DNGAGGGVEEGGGQQREGMDIPLLEGEQGEQENAGPSFEAVQKATTEEEAVAAGVAAAGSGGARPAPVMNATARGFYKGSVPLAVFRAAVKAVPEDVEFRAGFLRCCAVDFPDVSREAAEAILGSIAQDFPENCEAWEVRASYPLLVAEGEGAKGGXXXXXXGLGPAMQECIGTFELAVGAIGVREPAMWVRYASFLKRRL 873
L R+ RALQ+HP NAGLWIKAASWEFFD NA +AR L+QR LRIN Q LW+QYFRLE+ Y++K++GR++VLGL D+ G GV + GG +DIP + QGE E++GP F V A EE G A+ A VM+ + FYKG VPLA+FRAA KA+P+D+ R L+ C +FP++S+ AIL S+ +DFP + EAW +RA +PLLV +G + A +CI FE AV + +W++Y+ FL RL
Sbjct: 98 LSRIFGRALQLHPHNAGLWIKAASWEFFDCANAVAARVLLQRALRINGVNQRLWVQYFRLEWCYLQKVIGRQQVLGLIEDDSEGGEGVGDAGG-----LDIPEV---QGEGESSGPDFSQVAAAEQEE-----GKASQKKRSASRQVVMSDATKQFYKGGVPLAIFRAARKALPDDIALRGHCLQVCCTEFPELSKHVQSAILDSLKEDFPASAEAWALRAQHPLLVLQGY-----EDEDLAAVVDAEGQCIQAFEAAVKSSAGDGADIWLQYSQFLHARL 360
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: A0A0L0H4B8_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H4B8_SPIPD) HSP 1 Score: 125 bits (313), Expect = 3.420e-26 Identity = 93/284 (32.75%), Postives = 141/284 (49.65%), Query Frame = 1
Query: 34 QSLGRLCARALQVHPRNAGLWIKAASWEFFDGGNASSARALMQRGLRINPTAQNLWLQYFRLEFSYIKKLMGRREVLGLDNGAGG----GVEEGGGQQREGMDIPLLEGEQGEQENAGPSFEAVQKATTEEEAVAAGVAAAGSGGARPAPVMNATARGFYKGSVPLAVFRAAVKAVPEDVEFRAGFLRCCAVDFPDVSREAAEAILGSIAQDFPENCEAWEVRASYPLLVAEGEGAKGGXXXXXXGLGPAMQECIGTFELAVGAIGVREPAMWVRYASFLKRRL 873
++LG+ A+A+Q+HP A W+ AA+WEF N +SAR L+QRGLRINP +Q LWL+YF+LE +I+K+ RR+VL D GG G ++ + EG+ +P L QE A S ++++ T V++ + A P + A + +P AV+R A+K +P+D++FR FL DF + E + S+ +DF A V A + G A+++ + F AV + E MW RYA FL L
Sbjct: 140 KALGKNFAKAIQLHPTKATFWVMAAAWEFEQNANMTSARVLLQRGLRINPESQKLWLEYFKLELLWIEKIKERRKVLFKDGVPGGTADAGQDDSNDESSEGVTVPQL------QEEAHLSATSLERDPT----VSSSTTQSSDTAALLKPTLTAMQQTLLNVLIPRAVYRNAIKTIPKDLDFRIAFLGIYK-DFGAETLAGQEEVYESLREDFGHLPAAQRVLAERHV---------DGVDPTDPAYPAALKKAVQAFNSAVEQLPSSE--MWERYADFLATSL 401
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: A0A507E3J3_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E3J3_9FUNG) HSP 1 Score: 120 bits (302), Expect = 8.900e-25 Identity = 90/285 (31.58%), Postives = 145/285 (50.88%), Query Frame = 1
Query: 34 QSLGRLCARALQVHPRNAGLWIKAASWEFFDGGNASSARALMQRGLRINPTAQNLWLQYFRLEFSYIKKLMGRREVL-GLDNGAGGGVEEGGGQQREGMDIPLLEGEQGEQENAGPSFEAVQKATTEEEAVAAGVAAAGSGGARP--APVMNATARGFYKGSVPLAVFRAAVKAVPEDVEFRAGFLRCCAVDFPDVSREAAEAILGSIAQDFPENCEAWEVRASYPLLVAEGEGAKGGXXXXXXGLGPAMQECIGTFELAVGAIGVREPAMWVRYASFLKRRLES 879
++L ++ A+A+Q+HP N WI AA+WEF D GN SSAR L+QRGLRINP ++ LW++YF+LE +++K+ RR+VL +D E +++P L GE ++ P Q AT +++ + S P + ++AT + K +P A++R A++ D+ FR FL + FPD +++ + + S+ DFP + +A A PL G A+++ + +F AV I PA+ Y SFL +L S
Sbjct: 136 KALAKVFAKAIQLHPTNDTFWIMAAAWEFQDNGNMSSARVLLQRGLRINPESKKLWVEYFKLELLWVEKIKERRKVLFKIDGSRAPETTTAIQPPSESINVPELAGE-----SSHPQTSISQDAT-----LSSSTQSGSSSDTAPMLSTTLSATQQALLKVLIPRAIYRNAIQTHSHDLPFRLEFLAVYRL-FPD-TKDGQDELFDSLVADFPTHPDARATLAQRPLA---------GVTSLDPAYPAALKQAVDSFTQAVNEIST--PAIHEAYTSFLLAQLAS 397
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: A0A4P9YE62_ROZAC (Uncharacterized protein n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YE62_ROZAC) HSP 1 Score: 107 bits (266), Expect = 4.520e-22 Identity = 58/105 (55.24%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 40 LGRLCARALQVHPRNAGLWIKAASWEFFDGGNASSARALMQRGLRINPTAQNLWLQYFRLEFSYIKKLMGRREVLGLDNGAGGGVEEGGGQQREG-MDIPLLEGE 351
LGRL ARA+QVHP G WI AASWEF GN +AR LMQR LRINP A+ LWL+YFRLE+ +I L RR+VLGL + Q++EG ++IP LE E
Sbjct: 127 LGRLFARAIQVHPMKPGFWIMAASWEFEQNGNVGAARKLMQRALRINPQAEKLWLEYFRLEWMFINLLKERRKVLGLKD-----------QEQEGQIEIPQLEEE 220
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: W7TSJ7_9STRA (RNA-processing protein, HAT helix n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSJ7_9STRA) HSP 1 Score: 112 bits (279), Expect = 6.620e-22 Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 1
Query: 46 RLCARALQVHPRNAGLWIKAASWEFFDGGNASSARALMQRGLRINPT-AQNLWLQYFRLEFSYIKKLMGRREVLGLDNGAGGGVEEGGGQQ---REGMDIPLLEGEQGEQENAGPSFEAVQKATTEEEAVAAGVAAAGSGGARPAPVMNATARGFYKGSVPLAVFRAAVKAVPEDVEFRAGFLRCCAVDFPDVSREAAEAILGSIA 651
R A+ALQ+ PR AGLWI+AAS+EFF+ + +AR LMQRGLR+N + + LW QYF+LE Y+ KL GRR LGL+ G EG G++ +E + +PL+EGE+G E +++ EE+ + + + R G+VP V+ AA++A P D++ R FL+ E AE + G +A
Sbjct: 127 RALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLE----GEEREGKGEEXXXKESVQLPLVEGEEG-------GVEGMKEVEPEED------------------LRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFLKAL---------EEAETLEGGVA 294
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: A0A7S4IRH2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IRH2_9STRA) HSP 1 Score: 112 bits (279), Expect = 7.170e-22 Identity = 88/259 (33.98%), Postives = 114/259 (44.02%), Query Frame = 1
Query: 40 LGRLCARALQVHPRNAGLWIKAASWEFFD----------------------------GGNASSARALMQRGLRINPTAQNLWLQYFRLEFSYIKKLMGRREVLGLDNGAGGGVEEGGGQQREGMDIPLLEGEQGEQENAGPSFEAVQKATTEEEAVAAGVAAAGSGGARPAPVMNATARGFYKGSVPLAVFRAAVKAVPEDVEFRAGFLRCCAVDFPDVSREAAEAILGSIAQDFPENCEAWEVRASYPLLVAEGEGAK 732
LGR+ A ALQ HP++ LWI+AAS EFF GGN SAR L+QRGLR NP+++ LW Q+F LE Y++KL GRRE+L L G + E G + +G G GE G SVPL V+R A+KAVP+D FR F+ FP++ R E I+ +I +DF ++ EAW RA Y GEG K
Sbjct: 164 LGRIFAEALQAHPKDESLWIEAASHEFFGPPGSLESDPNYDPDDXXXXXXXXNAKNLGGNVRSARVLLQRGLRANPSSRALWHQHFCLELHYVQKLRGRREILRLGLKGVGTLSEDGDETGDG-------GXXGE--------------------------------------------GAVSDSVPLVVYRNAIKAVPDDAAFRLHFVDLSR-QFPEMDRVRTE-IVRTIERDFGDSVEAWVARARYAAEGLSGEGNK 369
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: A0A8H7UHG8_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UHG8_MORIS) HSP 1 Score: 110 bits (274), Expect = 2.380e-21 Identity = 87/283 (30.74%), Postives = 131/283 (46.29%), Query Frame = 1
Query: 34 QSLGRLCARALQVHPRNAGLWIKAASWEFFDGGNASSARALMQRGLRINPTAQNLWLQYFRLEFSYIKKLMGRREVLGLDNGAGG-----GVEEGGGQQREGMDIPLLEGEQGEQENAGPSFEAVQKATTEEEAVAAGVAAAGSGGARPAPVMNATARGFYKGSVPLAVFRAAVKAVPEDVEFRAGFLRCCAVDFPDVSREAAEAILGSIAQDFPENCEAWEVRASYPLLVAEGEGAKGGXXXXXXGLGPAMQECIGTFELAVGAIGVREPAMWVRYASFLKR 867
++LG++ A A+Q+HPR A LWI AASWEF + N +AR LMQRGLR+NP + LW +YF+LE YI+K+ RR++LG+D + +E G E + +P + GE + EE+VA M G + V+ A+KA+P D+EFR F+ DF D + + + +I DF N +A + L E A++EC+ F++ V I + MW Y+ FL +
Sbjct: 125 KTLGKIFADAIQLHPRKAPLWIMAASWEFEENANIVAARVLMQRGLRLNPAEEQLWHEYFKLEQVYIEKIKARRKILGIDQKSQALRELESTDEDG---EEMIKLPTVTA--GEAXXXXXXXXXARAVKQMEESVA--------------EKMREGINPILNGLLSQIVYDNAIKAIPNDLEFRTKFIDIYN-DFSD-TEAGIQHVYNTIHDDFANNEDARAYLVARHLNAKNEENGHTTIKINDPKFVQAIRECVQEFDVCVQDIPTTK--MWELYSDFLTK 384
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: UPI001CF5A0E2 (U3 small nucleolar RNA-associated protein 6 homolog n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5A0E2) HSP 1 Score: 109 bits (272), Expect = 3.110e-21 Identity = 74/219 (33.79%), Postives = 105/219 (47.95%), Query Frame = 1
Query: 37 SLGRLCARALQVHPRNAGLWIKAASWEFFDGGNASSARALMQRGLRINPTAQNLWLQYFRLEFSYIKKLMGRREVLGLDNGAGGGVEEGGGQQREGMDIPLLEGEQGEQENAGPSFEAVQKATTEEEAVAAGVAAAGSGGARPAPVMNATARGFYKGSVPLAVFRAAVKAVPEDVEFRAGFLRCCAVDFPDVSREAAEAILGSIAQDFPENCEAWEVRA 693
+LG+ ARALQ H LWI AA WEF D N + RAL QRGLR+N +++ LWL+YFR+E +++K+ RR VLGL G + +QEN +EE VA F G VP VF+ A++ +P+DV+FR F+ + F D ++E + I S+ +DFP + EAW + A
Sbjct: 124 ALGKTLARALQFHSEKPSLWIMAAKWEFEDNNNVPNCRALFQRGLRVNSSSKQLWLEYFRMELLHLEKIKKRRAVLGLKEG------------------------EKQQEN-------------DEEEVAPE---------------------FLSGKVPEIVFKKAIECIPDDVQFRKSFIDIYRL-FED-TKEGCDLIYNSLLEDFPLSEEAWNLLA 282
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Match: A0A068S445_9FUNG (U3 small nucleolar rna-associated protein 6homolog n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S445_9FUNG) HSP 1 Score: 107 bits (267), Expect = 1.490e-20 Identity = 92/287 (32.06%), Postives = 137/287 (47.74%), Query Frame = 1
Query: 40 LGRLCARALQVHPRNAGLWIKAASWEFFDGGNASSARALMQRGLRINPTAQNLWLQYFRLEFSYIKKLMGRREVLGLDNGAGGGVEEGGGQQREGMDI---------PLLEGEQGEQ-ENAGPSFEAVQKATTEEEAVAAGVAAAGSGGARPAPVMNATARGFYKGSVPLAVFRAAVKAVPEDVEFRAGFLRCCAVDFPDVSREAAEAILGSIAQDFPENCEAWEVRASYPLLV--AEGEGAKGGXXXXXXGLGPAMQECIGTFELAVGAIGVREPAMWVRYASFLK 864
L + ALQ+HP A LWI A+SWEF N +SAR LMQRGLR+NPT + LW +YFRLE Y++K+ RR VLG+D+ + E +Q + MD+ P + GE+ E +NA + V+K EE A A + +G + V+ A++A+P D+EFR F+ F D + + ++ +I +D + +A AS L V E +G PA++ C+ F A+ + E M RY FL+
Sbjct: 119 LSGIFVNALQIHPTKALLWIMASSWEFEHNANPASARVLMQRGLRLNPTDELLWHEYFRLELLYVEKIKLRRRVLGVDDES----LEKHMKQEDKMDVDWKDDSIKLPTITGEEAEDWKNASDERKTVKK--MEESA---------------AEALKEGNNPILQGILATIVYDNAIQAIPNDLEFRTKFIDIYH-QFTDPEK-GCDHVVETIQRDMADRPDARAYLASRHLFVQKTEEDGTSKYIACSDPAFVPALKACVEEFNQAIQDLPTAE--MHERYIDFLQ 380 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1256.5180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1256.5180.1 >prot_M-pyrifera_M_contig1256.5180.1 ID=prot_M-pyrifera_M_contig1256.5180.1|Name=mRNA_M-pyrifera_M_contig1256.5180.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=676bp IYLYNYAPFPGQSLGRLCARALQVHPRNAGLWIKAASWEFFDGGNASSARback to top mRNA from alignment at M-pyrifera_M_contig1256:154..2863+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1256.5180.1 ID=mRNA_M-pyrifera_M_contig1256.5180.1|Name=mRNA_M-pyrifera_M_contig1256.5180.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2710bp|location=Sequence derived from alignment at M-pyrifera_M_contig1256:154..2863+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1256:154..2863+ >mRNA_M-pyrifera_M_contig1256.5180.1 ID=mRNA_M-pyrifera_M_contig1256.5180.1|Name=mRNA_M-pyrifera_M_contig1256.5180.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4056bp|location=Sequence derived from alignment at M-pyrifera_M_contig1256:154..2863+ (Macrocystis pyrifera P11B4 male)back to top |