mRNA_M-pyrifera_M_contig124599.4999.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A6L7S1L3_9RHOB (Amino acid-binding protein n=4 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L7S1L3_9RHOB) HSP 1 Score: 137 bits (346), Expect = 1.300e-37 Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
+F+ D+V+LEEP HD KW +IQPTDDPDW AKS A V W A H+H+AK +E +P+ AS+LAN+ TA+EV+AM+ A+ DGK P YA+EW+A N D+V GWL
Sbjct: 207 VFALHDVVVLEEPPHDASKWMVIQPTDDPDWFAKSDAAVAWDSAYLHLHYAKELETSHPEVASMLANMALTADEVSAMTFALVIDGKEPLAYAEEWVAANEDKVLGWL 314
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A849F789_9RHOB (Amino acid-binding protein n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A849F789_9RHOB) HSP 1 Score: 128 bits (321), Expect = 4.540e-34 Identity = 53/108 (49.07%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
+F DL +LEEPAHDP W I+QPTDDPDWLAKS A W+ A H+H+AKS+E+++P+ A++ AN + ++AM A+ DG+ D+A EW+A N D++ GWL
Sbjct: 188 IFVTQDLHVLEEPAHDPATWTIVQPTDDPDWLAKSEASTAWNGATLHLHYAKSLEEDFPEVAALFANFQMDGDALSAMGKALAVDGQEAADFAAEWVAANEDKIIGWL 295
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A0B3RY87_9RHOB (Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein n=2 Tax=Mameliella alba TaxID=561184 RepID=A0A0B3RY87_9RHOB) HSP 1 Score: 127 bits (318), Expect = 1.680e-33 Identity = 55/108 (50.93%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
+F+ DL+MLEEPA+D W ++QPTDDPDWLAKSS W A+ H+ F K++E E P+ A++L NI FTA+EV+AM+ AV D + P+ YAK+W+A + D + GW
Sbjct: 201 IFAVHDLIMLEEPAYDAANWTVVQPTDDPDWLAKSSVSSAWPTAQVHVGFRKALETENPEVAAMLRNITFTADEVSAMTQAVVIDKQDPETYAKDWVAAHQDAIVGWF 308
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A839U668_9HYPH (Glycine betaine/proline transport system substrate-binding protein n=3 Tax=Phyllobacterium TaxID=28100 RepID=A0A839U668_9HYPH) HSP 1 Score: 126 bits (316), Expect = 4.350e-33 Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
+F D+V L+EPAHD KW +I P DDPDWLAKS+APV W A+FHI ++K++ + P+ L NI FT +E+ MS AVE D + P DYAK W+ ++ DRV WL
Sbjct: 211 VFKLHDIVKLDEPAHDASKWHVILPADDPDWLAKSNAPVAWDAARFHIAYSKALATKSPEVTKFLENIDFTPDEITEMSYAVEVDRQPPADYAKAWVGKHADRVQKWL 318
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A2E8YGC0_9GAMM (Amino acid-binding protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E8YGC0_9GAMM) HSP 1 Score: 125 bits (315), Expect = 5.090e-33 Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
MF DLV+LEEPAHDP KW +IQPTDDPDWLAKSSAPV WS HIH+AK++ D+ PQAA IL N+ + ++V+ M + + + +D A+++I +N D V+ WL
Sbjct: 207 MFGLHDLVVLEEPAHDPAKWNVIQPTDDPDWLAKSSAPVAWSDTYLHIHYAKALADKQPQAAQILENLKVSTDQVSDMVFEMTVNKVSGEDVARKFIEENGDLVDSWL 314
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A1H0PJG2_9HYPH (Glycine betaine/proline transport system substrate-binding protein n=5 Tax=Phyllobacterium TaxID=28100 RepID=A0A1H0PJG2_9HYPH) HSP 1 Score: 125 bits (315), Expect = 6.120e-33 Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
+F D+V L+EPA DP KW ++ P DDPDWLAKS+APV W KA FHI +AK++ P+ L +I FT E+ MS AVE D +TP+DYA+ W+ +N DR+ W+
Sbjct: 211 VFKLHDIVKLDEPAFDPAKWHVVLPADDPDWLAKSNAPVAWDKAHFHIAYAKALATRKPEVTKFLESIDFTPEEITDMSYAVEVDRQTPEDYAEAWVEKNPDRIAKWV 318
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A0P1F4W0_9RHOB (Glycine betaine-binding periplasmic protein n=15 Tax=Ruegeria TaxID=97050 RepID=A0A0P1F4W0_9RHOB) HSP 1 Score: 125 bits (314), Expect = 7.470e-33 Identity = 53/108 (49.07%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
+F+ D+ +LEEPA+D KW ++QPTDDPDWL KS A V W A H+HFAKS+E+EYP+ A++L+N+ + V+AM+ A+ +G+ P YA+EW+ N D V GW+
Sbjct: 207 VFALHDMQILEEPAYDAAKWNVLQPTDDPDWLEKSEAGVAWDLAYLHLHFAKSLEEEYPEVATMLSNMKLDTDTVSAMTFALVIEGQEPLAYAEEWVGANEDAVLGWM 314
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A521DR81_9RHOB (Glycine betaine/proline transport system substrate-binding protein n=4 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A521DR81_9RHOB) HSP 1 Score: 125 bits (314), Expect = 7.470e-33 Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
+F DL +LEEPA+D KW ++QPTDDPDWL KS A V W A H+H+AKS+EDEYP+ A +L+N+ V+AM+ A+ DGK P YA+EW+ N D V W+
Sbjct: 207 VFELHDLQILEEPAYDAAKWNVLQPTDDPDWLEKSEAGVAWDLAYLHLHYAKSLEDEYPEVARLLSNMKLDTAAVSAMTYALVIDGKEPLAYAEEWVGANEDAVLNWM 314
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A1M4YM64_9RHOB (Glycine betaine/proline transport system substrate-binding protein n=1 Tax=Ruegeria intermedia TaxID=996115 RepID=A0A1M4YM64_9RHOB) HSP 1 Score: 124 bits (310), Expect = 2.930e-32 Identity = 52/108 (48.15%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
+F DL +L+EP +D KWK++QPTDDP+WL KS A V W KA H+H+AKS+E+++P+ A +LAN+ ++V+ M+ A+ D K PQ YA+EW+A + D V GW+
Sbjct: 207 VFQLHDLQVLDEPPYDAAKWKVLQPTDDPEWLEKSEAGVAWDKAYLHLHYAKSLENDFPEVARLLANMKLDTDQVSEMTYALVIDEKDPQAYAEEWVAAHEDAVLGWM 314
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: UPI000CE1ACD8 (amino acid-binding protein n=1 Tax=Roseovarius nitratireducens TaxID=2044597 RepID=UPI000CE1ACD8) HSP 1 Score: 123 bits (309), Expect = 4.120e-32 Identity = 50/108 (46.30%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 324
+F+ D+ +L+EP HDP KW ++QPTDDPDWLAKS W KA H+++A+++E +P A++L+N+ F V M+ A+ DGK P YA+EW+A N D V GW+
Sbjct: 207 VFALHDMQVLQEPPHDPDKWNVLQPTDDPDWLAKSDVTTAWDKAYLHVYYARALESSHPNVAALLSNVKFDTQTVTDMTYALVIDGKEPLAYAEEWVAANEDAVLGWM 314 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124599.4999.1 >prot_M-pyrifera_M_contig124599.4999.1 ID=prot_M-pyrifera_M_contig124599.4999.1|Name=mRNA_M-pyrifera_M_contig124599.4999.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFback to top mRNA from alignment at M-pyrifera_M_contig124599:6..332+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124599.4999.1 ID=mRNA_M-pyrifera_M_contig124599.4999.1|Name=mRNA_M-pyrifera_M_contig124599.4999.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=327bp|location=Sequence derived from alignment at M-pyrifera_M_contig124599:6..332+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124599:6..332+ >mRNA_M-pyrifera_M_contig124599.4999.1 ID=mRNA_M-pyrifera_M_contig124599.4999.1|Name=mRNA_M-pyrifera_M_contig124599.4999.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig124599:6..332+ (Macrocystis pyrifera P11B4 male)back to top |