mRNA_M-pyrifera_M_contig124273.4945.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: R1FFI5_EMIHU (U-box domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FFI5_EMIHU) HSP 1 Score: 85.5 bits (210), Expect = 1.130e-19 Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 22 PSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQIIEWAEGY 234
P ++CPIT ++M DPV+ DGHTY+R A+E WFA+ + +SPKTGA +D +PNHA+R QIIEW E +
Sbjct: 26 PEIFVCPITQELMQDPVMA-TDGHTYERHAVERWFAT-RLTSPKTGAALDLALLLPNHAMRHQIIEWREAH 94
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: A0A7S4D0S3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4D0S3_9EUGL) HSP 1 Score: 84.7 bits (208), Expect = 7.290e-19 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 22 PSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQIIEWAEG 231
P + CPIT D+MADPVL ADGHTY+RAA+ WF SG R+SP T + ++ +PN ALR+QII AEG
Sbjct: 65 PHEFHCPITQDVMADPVLA-ADGHTYERAAVTRWFYSGHRTSPSTNLPLPSMLLIPNIALRSQIIAMAEG 133
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: A0A7S3AKT9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AKT9_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 2.970e-18 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 16 DAPSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQIIEW 222
DA A++CPI+ D+M DPV C ADGHTY+R+ +E W A+G +SP TGA + ++ VPNHALR I EW
Sbjct: 6 DALHAFVCPISGDVMRDPVSC-ADGHTYERSEIERWLATGACTSPSTGARLPHLHVVPNHALRCAIEEW 73
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: A0A7S1T0G1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0G1_9CHLO) HSP 1 Score: 85.9 bits (211), Expect = 3.700e-18 Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 4 AEATDAPSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQIIEWA 225
A+ APS++ CPI+MD+MADPV+ +A GHTYDR+ +E W A G R+ P TG + +++ PN ALR+ I +WA
Sbjct: 105 AKGLKAPSSFFCPISMDLMADPVM-VATGHTYDRSCIERWLAQGHRTCPATGVRLRHLELTPNFALRSAIQDWA 177
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: F0YN19_AURAN (U-box domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN19_AURAN) HSP 1 Score: 80.5 bits (197), Expect = 4.320e-18 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 22 PSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQI 213
P AY CPIT ++M +PV+C ADGHTY++AA+E WF K +SPKTG +D+ VPN A+R+ I
Sbjct: 1 PDAYTCPITRELMREPVVC-ADGHTYEKAAIEAWFLEDKSTSPKTGLALDSKHLVPNFAIRSAI 63
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: A0A8J2WWT7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWT7_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 7.810e-18 Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 22 PSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQIIEWAE 228
PS + C IT ++M+DP + ADGHTY+R A++ WFA+G R+SP T + ++Q +PNHALRA I+E E
Sbjct: 51 PSKFYCCITTEVMSDPCMA-ADGHTYERCAIDQWFATGARTSPTTNEPLASLQLIPNHALRAMIVEELE 118
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: A0A8J4DD08_9CHLO (U-box domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4DD08_9CHLO) HSP 1 Score: 86.7 bits (213), Expect = 9.080e-18 Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 19 APSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQIIEWAEGY 234
APS++ CPI+M++MADPV+ +A GHTYDR +E W A G R+ P TG + +++ PN+ALRA I EWA +
Sbjct: 55 APSSFYCPISMELMADPVM-VATGHTYDRQCIEKWLAQGNRTCPVTGMRLRHLELTPNYALRAAIQEWASAH 125
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: L1JWW5_GUITC (U-box domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JWW5_GUITC) HSP 1 Score: 83.2 bits (204), Expect = 1.180e-17 Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 16 DAPSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQIIEWAEGYNK 240
D P Y CPITMD+M DPV+ + DGHTY+R A+E W + K+S PKT + + +PNHAL++ IIEW E K
Sbjct: 128 DIPFEYQCPITMDVMTDPVIAM-DGHTYERQAIESWLKNHKKS-PKTNLPLPSNMLIPNHALKSMIIEWKESRKK 200
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: A0A1R3G250_COCAP (RING-type E3 ubiquitin transferase n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3G250_COCAP) HSP 1 Score: 86.3 bits (212), Expect = 1.500e-17 Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 22 PSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQIIEWAEGYN-KIARKSMPETERIGSEGAGEEI 303
P +LCPIT+DIM+DPV+ IA G TY+R +++ WF S R+ PKT T+D++ PN AL+ I +W E N K+ +K PE+ + SE EEI
Sbjct: 585 PCEFLCPITLDIMSDPVI-IASGQTYERKSIQTWFDSKHRTCPKTRQTLDHLLVAPNFALKNLISQWCEKNNFKLPKKEDPESSQGSSEDHKEEI 678
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Match: R1D2B9_EMIHU (U-box domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D2B9_EMIHU) HSP 1 Score: 78.6 bits (192), Expect = 3.300e-17 Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 22 PSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPKTGATIDNIQTVPNHALRAQIIEWAEGY 234
P ++CPIT ++M+DPV+ ADGH+Y+R+A+E W AS K +SP TG +++ +PNH LR QI EW E +
Sbjct: 3 PHDFVCPITTEVMSDPVMA-ADGHSYERSAIERWLAS-KSTSPLTGGELEHRILIPNHTLRRQIGEWHEAH 71 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124273.4945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124273.4945.1 >prot_M-pyrifera_M_contig124273.4945.1 ID=prot_M-pyrifera_M_contig124273.4945.1|Name=mRNA_M-pyrifera_M_contig124273.4945.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp AAEATDAPSAYLCPITMDIMADPVLCIADGHTYDRAALEHWFASGKRSSPback to top mRNA from alignment at M-pyrifera_M_contig124273:204..506- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124273.4945.1 ID=mRNA_M-pyrifera_M_contig124273.4945.1|Name=mRNA_M-pyrifera_M_contig124273.4945.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=303bp|location=Sequence derived from alignment at M-pyrifera_M_contig124273:204..506- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124273:204..506- >mRNA_M-pyrifera_M_contig124273.4945.1 ID=mRNA_M-pyrifera_M_contig124273.4945.1|Name=mRNA_M-pyrifera_M_contig124273.4945.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig124273:204..506- (Macrocystis pyrifera P11B4 male)back to top |