mRNA_M-pyrifera_M_contig123868.4885.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: UPI00118A29B3 (hypothetical protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00118A29B3) HSP 1 Score: 107 bits (267), Expect = 1.040e-26 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 1
Query: 1 RSDGKIKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRR 168
RSDGK+KFDMKANERREDAIVRNLLKGSRVVVITLGKDHDL DNIRRLSPKVRYRR
Sbjct: 166 RSDGKVKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLHDNIRRLSPKVRYRR 221
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: A0A517W8M0_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517W8M0_9PLAN) HSP 1 Score: 100 bits (250), Expect = 3.150e-24 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 1
Query: 4 SDGKIKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRR 168
SDG +FDMKANE+REDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRR
Sbjct: 167 SDGSDEFDMKANEKREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRR 221
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: A0A517WSC5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WSC5_9PLAN) HSP 1 Score: 83.6 bits (205), Expect = 2.580e-18 Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 1
Query: 1 RSDGKIKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRR 168
RSDGK+ FD KA+E+REDAIVRNLLKGS VVVITLG++H L DNI+RLSP V+YRR
Sbjct: 166 RSDGKVVFDKKADEKREDAIVRNLLKGSGVVVITLGENHILGDNIQRLSPGVKYRR 221
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: A0A517VRR8_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VRR8_9PLAN) HSP 1 Score: 81.6 bits (200), Expect = 4.960e-17 Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 1
Query: 1 RSDGKIKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRY 162
R DGKI FD +A+ERREDAIVRNLLKGS VVVI LG+DHDL+DN++RL P V+Y
Sbjct: 166 RDDGKIVFDKEADERREDAIVRNLLKGSGVVVIVLGEDHDLRDNLKRLGPGVKY 219
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: UPI001187CFCB (hypothetical protein n=1 Tax=Gimesia maris TaxID=122 RepID=UPI001187CFCB) HSP 1 Score: 71.6 bits (174), Expect = 7.050e-14 Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 1
Query: 1 RSDGKIKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRR 168
RSDG FD A+ERREDAIV NLLKGS VVVI LG+DHDL++N++RL V+Y+R
Sbjct: 152 RSDGWGVFDKNADERREDAIVVNLLKGSGVVVIVLGEDHDLRENLKRLGASVKYKR 207
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: A0A518IKR5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IKR5_9PLAN) HSP 1 Score: 68.6 bits (166), Expect = 1.340e-12 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 1 RSDGKIKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRR 168
R+DG + FD KA+E REDAIVRNLLK VVVITLG HDL DN++RL+ +Y R
Sbjct: 166 RADGTVVFDKKADEAREDAIVRNLLKADGVVVITLGGAHDLSDNLKRLAKGCKYER 221
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: A0A5A8BFQ7_9PLAN (Uncharacterized protein n=4 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8BFQ7_9PLAN) HSP 1 Score: 64.7 bits (156), Expect = 4.030e-11 Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 13 KIKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRY 162
KI+FD ANERREDAIV NLLK VI LGKDH+LQDN+ RL +Y
Sbjct: 164 KIEFDKNANERREDAIVGNLLKAEGTAVILLGKDHNLQDNLNRLGASCKY 213
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: A0A518FIP9_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FIP9_9PLAN) HSP 1 Score: 63.2 bits (152), Expect = 1.510e-10 Identity = 30/50 (60.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 13 KIKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRY 162
K++FD KANERREDAIVRNL+K V VI LG+DH+L+DN+ +L +Y
Sbjct: 164 KVEFDKKANERREDAIVRNLMKAKGVAVILLGEDHNLRDNMLQLGVSSKY 213
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: A6CFP0_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris DSM 8797 TaxID=344747 RepID=A6CFP0_9PLAN) HSP 1 Score: 57.8 bits (138), Expect = 8.670e-10 Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 22 FDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRR 168
F + A+E EDAIVRNL KGS VVVITLG HDL+DN++RL +Y+R
Sbjct: 19 FKLCADETPEDAIVRNLWKGSGVVVITLGVGHDLRDNLKRLGVACKYQR 67
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Match: A0A517VML1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VML1_9PLAN) HSP 1 Score: 60.5 bits (145), Expect = 1.500e-9 Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 4 SDGKIKFDMKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRR 168
+DG + D KA+E REDAIV+NL+K VVVI LG HDL DNI+R +Y R
Sbjct: 169 ADGSVVIDKKADEAREDAIVKNLMKADGVVVIILGGGHDLSDNIKRAESNCKYER 223 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123868.4885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123868.4885.1 >prot_M-pyrifera_M_contig123868.4885.1 ID=prot_M-pyrifera_M_contig123868.4885.1|Name=mRNA_M-pyrifera_M_contig123868.4885.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=47bp MKANERREDAIVRNLLKGSRVVVITLGKDHDLQDNIRRLSPKVRYRRback to top mRNA from alignment at M-pyrifera_M_contig123868:353..520- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123868.4885.1 ID=mRNA_M-pyrifera_M_contig123868.4885.1|Name=mRNA_M-pyrifera_M_contig123868.4885.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=168bp|location=Sequence derived from alignment at M-pyrifera_M_contig123868:353..520- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123868:353..520- >mRNA_M-pyrifera_M_contig123868.4885.1 ID=mRNA_M-pyrifera_M_contig123868.4885.1|Name=mRNA_M-pyrifera_M_contig123868.4885.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=282bp|location=Sequence derived from alignment at M-pyrifera_M_contig123868:353..520- (Macrocystis pyrifera P11B4 male)back to top |