mRNA_M-pyrifera_M_contig12358.4826.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12358.4826.1 vs. uniprot
Match: A0A3M2HQT5_9GAMM (Uncharacterized protein n=1 Tax=Lysobacter pythonis TaxID=2483112 RepID=A0A3M2HQT5_9GAMM) HSP 1 Score: 58.9 bits (141), Expect = 1.510e-7 Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 4 ISIASNSGKYTPLLTAAR---YGDPHLVEYLLAQGADVHAELEWGDNALHFAV-DNDADVFRLLLNAGADVNHLNDKRQSPLSSAMQNCNIRIVE 276
+ + + G+ TPLL A R +G P V LLA GADV A G LH A D V LLL+A A+++ L+D+RQSPL+ A Q N R+ +
Sbjct: 304 VPLTAAPGQPTPLLAATRDSWHGRPEAVMTLLANGADVRARDGDGRTPLHHAARSTDPSVAALLLDAAAEIDALDDQRQSPLALACQAGNWRMAK 398
BLAST of mRNA_M-pyrifera_M_contig12358.4826.1 vs. uniprot
Match: A0A6G0XJN4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJN4_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 2.990e-7 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 1 DISIASNSGKYTPLLTAARYGDPHLVEYLLAQGADVHAELEWGDNALHFAVD-NDADVFRLLLNAGADVNHLNDKRQSPLSSAM 249
D+ + S + TPL+ AA G ++EYLL QGADV AE + G+ ALHFA D +LL AGAD++ N R++P AM
Sbjct: 111 DVDVMSK--QKTPLMLAATLGRVDIMEYLLDQGADVFAENDEGNTALHFACDAGHVYATYVLLTAGADLDLPNQARKTPEDVAM 192
BLAST of mRNA_M-pyrifera_M_contig12358.4826.1 vs. uniprot
Match: UPI000B2D2B0F (ankyrin repeat domain-containing protein n=1 Tax=Endozoicomonas ascidiicola TaxID=1698521 RepID=UPI000B2D2B0F) HSP 1 Score: 57.0 bits (136), Expect = 7.380e-7 Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 34 TPLLTAARYGDPHLVEYLLAQGADVHAELEWGDNALHFAVDN-DADVFRLLLNAGADVNHL--NDKRQSPLSSAMQNCNIRIVEM 279
TPL+ AA +VEYLL +GADVHAE + G A+HFA + + ++ +L+ +GADV+H + K + PL A+ N + E+
Sbjct: 2229 TPLICAATNEQLSVVEYLLNEGADVHAEQDEGFTAIHFAAETGEENLLNILIKSGADVDHQAWDYKEKFPLCIAVTNQKLAAAEV 2313
BLAST of mRNA_M-pyrifera_M_contig12358.4826.1 vs. uniprot
Match: A0A4V3UU96_9GAMM (Uncharacterized protein n=1 Tax=Pseudofulvimonas gallinarii TaxID=634155 RepID=A0A4V3UU96_9GAMM) HSP 1 Score: 55.5 bits (132), Expect = 2.440e-6 Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 34 TPLLTAAR---YGDPHLVEYLLAQGADVHAELEWGDNALHFA-VDNDADVFRLLLNAGADVNHLNDKRQSPLSSAMQNCNI 264
TPLL A R YG P +V L+A GAD+H E G ALH A + ++ V +LL+AGA V+ ++D+ +PL+ A + NI
Sbjct: 317 TPLLLATRDSYYGRPEIVLALIANGADIHVRDEAGRTALHHAALSSEPAVLAMLLDAGAQVDAVDDEGYTPLAWACAHGNI 397
BLAST of mRNA_M-pyrifera_M_contig12358.4826.1 vs. uniprot
Match: A0A1N6S9C0_9GAMM (Uncharacterized protein n=1 Tax=Lysobacter tolerans TaxID=1604334 RepID=A0A1N6S9C0_9GAMM) HSP 1 Score: 54.7 bits (130), Expect = 4.570e-6 Identity = 37/95 (38.95%), Postives = 51/95 (53.68%), Query Frame = 1
Query: 4 ISIASNSGKYTPLLTAAR---YGDPHLVEYLLAQGADVHAELEWGDNALHFAV-DNDADVFRLLLNAGADVNHLNDKRQSPLSSAMQNCNIRIVE 276
+ + + G+ T LL A R +G P V LLA GAD A G+ LH A D V LLL+A A+++ +ND RQSPL+ A N R+ +
Sbjct: 358 LPLGAEPGRLTALLAATRDSWHGRPEAVMTLLANGADPRARDAEGNTPLHHAACSTDPGVAALLLDAAAEIDAINDARQSPLAMACLVGNWRLAK 452
BLAST of mRNA_M-pyrifera_M_contig12358.4826.1 vs. uniprot
Match: UPI001BE6517D (M48 family metallopeptidase n=1 Tax=Planococcus sp. ISL-109 TaxID=2819166 RepID=UPI001BE6517D) HSP 1 Score: 53.1 bits (126), Expect = 1.410e-5 Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 34 TPLLTAARYGDPHLVEYLLAQGADVHAELEWGDNALHFAV-DNDADVFRLLLNAGADVNHLND 219
TPL+ AA GD VE +LA G D+HA+ G +AL +A+ DAD+ LL+AGADVN ++D
Sbjct: 310 TPLMAAAGEGDLAGVEQVLADGEDIHAKDAEGADALMYAMYSGDADIINALLDAGADVNTVDD 372
BLAST of mRNA_M-pyrifera_M_contig12358.4826.1 vs. uniprot
Match: A0A7Y4JBI9_MYXXA (Ankryin n=1 Tax=Myxococcus xanthus TaxID=34 RepID=A0A7Y4JBI9_MYXXA) HSP 1 Score: 52.4 bits (124), Expect = 2.660e-5 Identity = 32/70 (45.71%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 67 PHLVEYLLAQGADVHAELEWGDNALHFAVDN---------DADVFRLLLNAGADVNHLNDKRQSPLSSAM 249
P V+ LL+QGADVH ++G LHFAV DV R+LL AGAD N L+D Q+PL A+
Sbjct: 29 PERVKDLLSQGADVHGRGDYGSTPLHFAVLAPYQREHPLPSVDVVRILLEAGADSNTLDDHAQTPLLRAL 98
BLAST of mRNA_M-pyrifera_M_contig12358.4826.1 vs. uniprot
Match: A0A2M9EMK0_9GAMM (Uncharacterized protein n=1 Tax=Xanthomonadaceae bacterium NML120232 TaxID=2032575 RepID=A0A2M9EMK0_9GAMM) HSP 1 Score: 52.4 bits (124), Expect = 2.920e-5 Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 4 ISIASNSGKYTPLLTAAR---YGDPHLVEYLLAQGADVHAELEWGDNALHFAV-DNDADVFRLLLNAGADVNHLNDKRQSPLSSAMQNCNIRIVE 276
+S+A+ GK +PLL A R +G P V LLA GA+ + G LH A D V LLL+AGA++ LN QSPL+ A N R+++
Sbjct: 309 VSVAAAPGKPSPLLAATRDSWHGRPEAVMTLLANGANPGETDDEGCTPLHHAARSTDPSVAALLLDAGAELEALNQAGQSPLAQAALVGNWRMLK 403 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12358.4826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12358.4826.1 >prot_M-pyrifera_M_contig12358.4826.1 ID=prot_M-pyrifera_M_contig12358.4826.1|Name=mRNA_M-pyrifera_M_contig12358.4826.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp DISIASNSGKYTPLLTAARYGDPHLVEYLLAQGADVHAELEWGDNALHFAback to top mRNA from alignment at M-pyrifera_M_contig12358:5172..5555+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12358.4826.1 ID=mRNA_M-pyrifera_M_contig12358.4826.1|Name=mRNA_M-pyrifera_M_contig12358.4826.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig12358:5172..5555+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12358:5172..5555+ >mRNA_M-pyrifera_M_contig12358.4826.1 ID=mRNA_M-pyrifera_M_contig12358.4826.1|Name=mRNA_M-pyrifera_M_contig12358.4826.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig12358:5172..5555+ (Macrocystis pyrifera P11B4 male)back to top |