mRNA_M-pyrifera_M_contig123515.4808.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE) HSP 1 Score: 177 bits (450), Expect = 8.070e-50 Identity = 86/91 (94.51%), Postives = 90/91 (98.90%), Query Frame = 1
Query: 1 SCGGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
SCGGADLWAKTQAQYFARESH+RPFL+VVNAIIKSELG LV+ASDLGQWQETLAILSTYAKQ+EFPTLCEALASRLETEAGDRKSANLCYM
Sbjct: 646 SCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVDASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYM 736
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: D8LBR5_ECTSI (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI) HSP 1 Score: 177 bits (449), Expect = 9.220e-50 Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 1
Query: 1 SCGGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
SCGGADLWAKTQAQYFARESH+RPFL+VVNAIIKSELG LVE SDLGQWQETLAILSTYAKQ+EFPTLCEALASRLETEAGDRKSANLCYM
Sbjct: 425 SCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEGSDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYM 515
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: A0A7S3UX94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX94_HETAK) HSP 1 Score: 127 bits (320), Expect = 6.220e-35 Identity = 63/91 (69.23%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 1 SCGGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
SCGGA+LWA TQA+YF RRPFL ++ IIKSELG LV A+ LG W+ETLAILSTYAK DEFP LCEALA+RLE EA D +A LCYM
Sbjct: 51 SCGGAELWASTQARYFEAAGTRRPFLDLMACIIKSELGELVGANALGAWEETLAILSTYAKSDEFPVLCEALAARLEGEARDAAAATLCYM 141
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: A0A7S0BZ92_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZ92_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.200e-34 Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 1
Query: 1 SCGGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
SCGGA+LWAKTQAQYF RE +RP+LRVV+A+I S+L V+ASD QWQETLAILSTY K +EF +LC AL +RLE EAGD +A+LCYM
Sbjct: 24 SCGGAELWAKTQAQYFDREVSKRPYLRVVSAVIHSQLAEFVQASDPLQWQETLAILSTYGKSEEFQSLCHALGTRLE-EAGDMPNASLCYM 113
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: A0A7S2Y0E2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E2_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.830e-33 Identity = 64/91 (70.33%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 1 SCGGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
SCGGADLWAKTQAQYF E RPFL +V+AII+SEL LV S L WQETLAILSTYAK +EFP LCE LA RLE+E+ D SA LCYM
Sbjct: 100 SCGGADLWAKTQAQYFETEGAYRPFLNIVSAIIRSELSKLVTTSKLTSWQETLAILSTYAKSEEFPGLCENLAERLESESFDVASATLCYM 190
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: A0A1E7FBK0_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBK0_9STRA) HSP 1 Score: 127 bits (318), Expect = 5.090e-32 Identity = 61/91 (67.03%), Postives = 72/91 (79.12%), Query Frame = 1
Query: 1 SCGGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
SCGGADLWAKTQ +YF +S +RPFL VV AII++EL L+++SDL WQETLAILSTY K DEFP LC AL RLE E+GD SA+LC+M
Sbjct: 560 SCGGADLWAKTQERYFESQSSKRPFLSVVGAIIRNELPSLIQSSDLATWQETLAILSTYGKSDEFPQLCVALGDRLE-ESGDHSSASLCFM 649
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: A0A7S2EHQ9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EHQ9_TRICV) HSP 1 Score: 118 bits (295), Expect = 8.040e-32 Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 7 GGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
GG+DLWA+ QA+YF RE+ +RPFL VV+A+I + L GLVE SD +W+ETLAILSTY K DEFP LC L RLE AGD K+A+LCYM
Sbjct: 1 GGSDLWARAQAEYFEREASKRPFLSVVSAVIHNRLDGLVEGSDPAKWRETLAILSTYGKSDEFPALCLKLGDRLEG-AGDMKNASLCYM 88
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: F0YCL1_AURAN (Sec16_C domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCL1_AURAN) HSP 1 Score: 124 bits (312), Expect = 3.070e-31 Identity = 61/91 (67.03%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 1 SCGGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
SCGGA+LW +T+A+YF S +PFL VV AII +ELG LV ASDL +W+ETLAILSTY K DEFP LCEAL RLE EA D K+A LCYM
Sbjct: 618 SCGGAELWERTRARYFDISSKAKPFLGVVRAIITNELGALVAASDLRKWEETLAILSTYGKSDEFPALCEALGGRLEHEARDDKAAALCYM 708
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: A0A7S2BT72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BT72_9STRA) HSP 1 Score: 115 bits (287), Expect = 6.310e-31 Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 1
Query: 1 SCGGADLWAKTQAQYFARESHRRP-FLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
SCGGA+LW +T+ +YF RE+ +RP FL +V AII S+L LV +S L W+ETLAILSTY K +EFP LCE L +RLE EA D+ SA LCYM
Sbjct: 18 SCGGAELWEQTRDRYFKREAAKRPEFLNIVTAIITSKLSDLVTSSHLADWRETLAILSTYGKSEEFPILCEQLGARLEAEADDKASAALCYM 109
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Match: A0A6V2GAE0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GAE0_9STRA) HSP 1 Score: 123 bits (309), Expect = 8.290e-31 Identity = 60/91 (65.93%), Postives = 74/91 (81.32%), Query Frame = 1
Query: 1 SCGGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQDEFPTLCEALASRLETEAGDRKSANLCYM 273
SCGGA+LWAKTQA+YFARE+ +RPFL +V+A+I ++L LV ASD +WQETLAILSTY K +EFP LC AL +RLE AGD SA+LC+M
Sbjct: 545 SCGGAELWAKTQAEYFAREAQKRPFLSIVSAVIHNQLEDLVAASDPSKWQETLAILSTYGKSEEFPLLCLALGNRLEG-AGDGASASLCFM 634 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123515.4808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123515.4808.1 >prot_M-pyrifera_M_contig123515.4808.1 ID=prot_M-pyrifera_M_contig123515.4808.1|Name=mRNA_M-pyrifera_M_contig123515.4808.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp SCGGADLWAKTQAQYFARESHRRPFLRVVNAIIKSELGGLVEASDLGQWQback to top mRNA from alignment at M-pyrifera_M_contig123515:134..409- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123515.4808.1 ID=mRNA_M-pyrifera_M_contig123515.4808.1|Name=mRNA_M-pyrifera_M_contig123515.4808.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=276bp|location=Sequence derived from alignment at M-pyrifera_M_contig123515:134..409- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123515:134..409- >mRNA_M-pyrifera_M_contig123515.4808.1 ID=mRNA_M-pyrifera_M_contig123515.4808.1|Name=mRNA_M-pyrifera_M_contig123515.4808.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig123515:134..409- (Macrocystis pyrifera P11B4 male)back to top |