mRNA_M-pyrifera_M_contig123137.4746.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig123137.4746.1
Unique NamemRNA_M-pyrifera_M_contig123137.4746.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: A0A662XX57_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XX57_9STRA)

HSP 1 Score: 100 bits (249), Expect = 9.720e-22
Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 1
Query:    1 MGCCGNRKVA----DMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASVDVTKIPLTGVCLPTCPTRGDVVCLYDYDNE 441
            MGCC  + V     D    +   +    A  RKC DVL +VLF ++W+GM+ +  +G IKGEP+ L++  DYNG  CG  ++  A              +YPR+N+DLL+ A   A ++  D++     GVC+ +CP  G  +C Y+ + E
Sbjct:  668 MGCCSKKPVGVDGGDGNGSKTHGVA--PASTRKCRDVLCVVLFAVFWVGMVAIAVVGFIKGEPKRLLYGTDYNGTTCGTGRHENAP-----------LTFYPRINQDLLEQATNPALTSPADLS---FYGVCVASCPEAGTYLCNYEAEAE 802          
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: H3GJB7_PHYRM (Choline transporter-like protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJB7_PHYRM)

HSP 1 Score: 99.4 bits (246), Expect = 2.360e-21
Identity = 47/147 (31.97%), Postives = 77/147 (52.38%), Query Frame = 1
Query:    1 MGCCGNRKVADMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASVDVTKIPLTGVCLPTCPTRGDVVCLYDYDNE 441
            MGCC N++   +  +E  +     A  RKC DVL ++ F ++W+GM+ + A+G + GEP+ L++  DYNG  CG             +  +    +YPR+ +DLL+ A     + S+        GVC+ +CP  G  +C Y+ +NE
Sbjct:    1 MGCCSNKQQVGVK-DEAASQGVAPASSRKCRDVLCVLFFAVFWVGMIAIAAVGFMHGEPKRLLYGSDYNGSTCG-----------TGEQEEYPLTFYPRITQDLLEQA----SNPSLSPEDFSFYGVCVESCPDAGSYICNYEAENE 131          
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: A0A662WJU6_9STRA (Choline transporter-like protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJU6_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 8.160e-21
Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 1
Query:    1 MGCCGNRKVA----DMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASVDVTKIPLTGVCLPTCPTRGDVVCLYDYDNENGT 450
            MGCC  + V     D    +   +    A  RKC DVL +VLF ++W+GM+ +  +G + GEP+ L++  DYNG  CG  K+  A              +YPR+N+DLL+ A     +++ D++     GVC+ +CP  G   C Y+ + E  T
Sbjct:    1 MGCCSKKPVGVDGGDGNGSKTHGVA--PASTRKCRDVLCVVLFAVFWVGMVAIAIVGFVNGEPKRLLYGTDYNGTTCGTGKHESAP-----------LTFYPRINQDLLEQATNPTLTSASDLS---FYGVCVASCPEEGTYFCNYEAEAEIAT 138          
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: A0A2D4BXT6_PYTIN (Choline transporter-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXT6_PYTIN)

HSP 1 Score: 96.7 bits (239), Expect = 2.070e-20
Identity = 55/141 (39.01%), Postives = 76/141 (53.90%), Query Frame = 1
Query:    7 CCGNRKVADMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASVDVTKIPLTGVCLPTCPTRGDVVCLYD 429
            CC   +  D+ A+       V    RKC DV   +LFI+YW+GM+ V AIG   G+P +L++ RDYNG  CG     GA        ++     +PRL+ED+L      A +  V +TK+P  GVC+ +CP  GD VC YD
Sbjct:    4 CCRKVEHEDV-ADAGHRSGLVPGSKRKCRDVFCCLLFIVYWLGMIVVAAIGLRAGKPLSLVYGRDYNGSTCG----TGAM-------AERPLTAFPRLDEDML-----VALTHRVPLTKMPFFGVCVASCPRTGDTVCTYD 127          
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: A0A6G0WDH7_9STRA (Choline transporter-like protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDH7_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 7.110e-20
Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 1
Query:    1 MGCCGNRKVADMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASVDVTKIPLTGVCLPTCPTRGDVVCLY 426
            MGCC +++  D+  +    +  V  K RKC DVL  V+FI++W+GM+ +  +G   G P++L++  D+NG VCG     GA     +DS   KY++YPR+NED+   A    Q  S+        G+C+  CP  GD +C Y
Sbjct:    1 MGCCSSKE--DVVPDGSGGV--VPTKTRKCRDVLCCVIFIVFWLGMVVLAIVGVANGTPQSLLYGTDFNGTVCGN----GAV----ADS---KYIFYPRMNEDMQVQAAKGIQPLSMK-----FYGLCVNKCPEMGDYICTY 122          
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: K3WN71_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WN71_GLOUD)

HSP 1 Score: 94.7 bits (234), Expect = 9.810e-20
Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = 1
Query:    7 CCGNRKVADMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASVDVTKIPLT----GVCLPTCPTRGDVV 417
            CC   K +D  A+        +   RKCTD+LF +LFIL+W+GM+ + A+G   GEP+ LI+  D+ G  CG  K   +      D +  KY+ YPRL EDLL   + +   +S+ +T         GVC+P CP   D +
Sbjct:    5 CC---KRSDANADTAAGANPFKPDNRKCTDILFFLLFILFWVGMIIIAAVGYQNGEPKRLIYGTDWMGRTCG-VKADASGSIPAYDLTDYKYLIYPRLGEDLLALELQSGGVSSISLTDTSALKKFYGVCVPKCPMTNDSI 141          
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: A0A5D6Y150_9STRA (Choline transporter-like protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y150_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.140e-18
Identity = 50/151 (33.11%), Postives = 78/151 (51.66%), Query Frame = 1
Query:    1 MGCCGNR--KVADMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASVDVTKIPLTGVCLPTCPTRGDVVCLYDYDNENG 447
            MGCC  +  +VA    + R+      A  RKC D    +LF+++W+GML V A+G + G+P+ L++  DYNG  CG     GA + +          +YPR++EDLL+ A  +  S+  D +     GVC+  CP      C Y+ + + G
Sbjct:    1 MGCCSKKPVEVAGENYDARKTGV-APASNRKCRDCFCCLLFLVFWVGMLVVAAVGLVSGQPKRLLYGSDYNGTTCG----TGAMESK-------PLTFYPRMSEDLLEQATASPGSSPTDFS---FYGVCVTECPLEYSYFCNYELEAKIG 136          
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: F0WBJ1_9STRA (Choline transporterlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBJ1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.480e-18
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 1
Query:   16 NRKVADMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASVDVTKIPLTGVCLPTCPTR-GDVVCLYDYDN 438
            +++ +D   E   +   ++ + RKCTD  FL LF+L+WIGM+ + AIG  KG P+ L++  D+ G  CG  +   +      D +  KY+ YPRL++DL       A  +   ++   L GVC+ +CP R G    ++ Y+N
Sbjct:    8 SKETSDTDIENGNDTNPLRVRKRKCTDTFFLFLFLLFWIGMIIIAAIGYKKGNPKRLMYGSDWLGRTCGTSQPETSTHIPPYDFTNYKYLMYPRLSKDL-------AMQSPTSLSLRKLYGVCVRSCPVRNGSTQYVHAYNN 142          
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: A0A662Y0E4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0E4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.490e-18
Identity = 47/115 (40.87%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   79 GRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGD--KNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASV--DVTKIPLTGVCLPTCPTRGD 411
             RKCTD+L LV F+ +W+GM+ + A+G   G+P+ LI+  D+ G  CGG   K      Y   D    +Y+ YPRL+EDL   A G A +A +    T   L GVC+P+CP   D
Sbjct:   38 NRKCTDLLCLVFFLAFWLGMIVIAAVGYTSGQPQRLIYGTDWMGRTCGGHAAKTSAVPAYDLRDY---RYIIYPRLSEDLEALAAGGATAAELASPSTLRKLFGVCVPSCPLLND 149          
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Match: A0A6A3YJ19_9STRA (Choline transporter-like protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YJ19_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.010e-17
Identity = 48/148 (32.43%), Postives = 74/148 (50.00%), Query Frame = 1
Query:    1 MGCCGNRK---VADMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVMAIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRLNEDLLDAAVGAAQSASVDVTKIPLTGVCLPTCPTRGDVVCLYDYD 435
            MGCC N +   V D  A +        A  RKC DVL ++LF ++W+GM+ +  +G + GEP+ L+F  DYNG  CG  K+                 +YPR+ +DL++ A     + S+        GVC+ +CP  G  +C Y+ +
Sbjct:    1 MGCCSNTEQVGVKDGVALQGV----APANSRKCRDVLCVLLFAVFWVGMVAIAIVGFMHGEPKRLLFGSDYNGTTCGTGKHDNQP-----------LTFYPRITQDLVEQA----SNPSLSPKDFSFYGVCVASCPDAGTYICNYEAE 129          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123137.4746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A662XX57_9STRA9.720e-2234.44Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3GJB7_PHYRM2.360e-2131.97Choline transporter-like protein n=1 Tax=Phytophth... [more]
A0A662WJU6_9STRA8.160e-2133.12Choline transporter-like protein n=1 Tax=Nothophyt... [more]
A0A2D4BXT6_PYTIN2.070e-2039.01Choline transporter-like protein n=1 Tax=Pythium i... [more]
A0A6G0WDH7_9STRA7.110e-2036.62Choline transporter-like protein n=1 Tax=Aphanomyc... [more]
K3WN71_GLOUD9.810e-2036.17Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6Y150_9STRA2.140e-1833.11Choline transporter-like protein n=1 Tax=Pythium b... [more]
F0WBJ1_9STRA5.480e-1833.10Choline transporterlike protein putative n=1 Tax=A... [more]
A0A662Y0E4_9STRA5.490e-1840.87Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A6A3YJ19_9STRA1.010e-1732.43Choline transporter-like protein n=4 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123137contigM-pyrifera_M_contig123137:10..522 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score99.4
Seed ortholog evalue1.6e-18
Seed eggNOG ortholog36331.EPrPI00000022532
Preferred nameSLC44A2
KEGG koko:K06515,ko:K15282,ko:K15377
KEGG TC2.A.92.1,2.A.92.1.1
KEGG Pathwayko05231,map05231
Hectar predicted targeting categorysignal anchor
GOsGO:0000003,GO:0000139,GO:0000325,GO:0001505,GO:0001558,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003002,GO:0003006,GO:0003674,GO:0005215,GO:0005326,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005802,GO:0005886,GO:0005911,GO:0006576,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006836,GO:0006887,GO:0006955,GO:0007154,GO:0007267,GO:0007275,GO:0007389,GO:0007399,GO:0007423,GO:0008104,GO:0008150,GO:0008152,GO:0008291,GO:0008292,GO:0008324,GO:0008509,GO:0008514,GO:0008519,GO:0008544,GO:0008610,GO:0008654,GO:0009056,GO:0009058,GO:0009308,GO:0009310,GO:0009505,GO:0009506,GO:0009524,GO:0009551,GO:0009653,GO:0009663,GO:0009705,GO:0009790,GO:0009791,GO:0009793,GO:0009887,GO:0009888,GO:0009913,GO:0009914,GO:0009987,GO:0010008,GO:0010051,GO:0010065,GO:0010067,GO:0010087,GO:0010088,GO:0010154,GO:0010496,GO:0010497,GO:0010817,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015101,GO:0015220,GO:0015605,GO:0015695,GO:0015696,GO:0015711,GO:0015748,GO:0015833,GO:0015870,GO:0015871,GO:0015893,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016324,GO:0017144,GO:0019637,GO:0019695,GO:0019867,GO:0022008,GO:0022414,GO:0022603,GO:0022604,GO:0022622,GO:0022857,GO:0023052,GO:0023061,GO:0030054,GO:0030100,GO:0030141,GO:0030154,GO:0030182,GO:0030307,GO:0030312,GO:0030659,GO:0030667,GO:0030855,GO:0030974,GO:0031090,GO:0031224,GO:0031410,GO:0031901,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031984,GO:0032474,GO:0032475,GO:0032501,GO:0032502,GO:0032588,GO:0032879,GO:0032940,GO:0033036,GO:0034220,GO:0034330,GO:0034641,GO:0035315,GO:0035461,GO:0035579,GO:0035675,GO:0036230,GO:0040008,GO:0042119,GO:0042133,GO:0042135,GO:0042136,GO:0042221,GO:0042402,GO:0042426,GO:0042445,GO:0042446,GO:0042471,GO:0042472,GO:0042490,GO:0042493,GO:0042581,GO:0042592,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043583,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044426,GO:0044428,GO:0044429,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044462,GO:0044464,GO:0045017,GO:0045055,GO:0045117,GO:0045177,GO:0045184,GO:0045216,GO:0045321,GO:0045927,GO:0046470,GO:0046474,GO:0046486,GO:0046879,GO:0046903,GO:0048316,GO:0048364,GO:0048366,GO:0048367,GO:0048468,GO:0048507,GO:0048508,GO:0048513,GO:0048518,GO:0048522,GO:0048562,GO:0048568,GO:0048598,GO:0048608,GO:0048638,GO:0048646,GO:0048666,GO:0048699,GO:0048731,GO:0048827,GO:0048839,GO:0048840,GO:0048856,GO:0048869,GO:0048878,GO:0048880,GO:0048882,GO:0048884,GO:0048886,GO:0048925,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051128,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0051510,GO:0055044,GO:0055085,GO:0055088,GO:0060429,GO:0060627,GO:0061458,GO:0061526,GO:0065007,GO:0065008,GO:0070013,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072348,GO:0072488,GO:0072531,GO:0090407,GO:0090422,GO:0090482,GO:0090596,GO:0090603,GO:0097164,GO:0097218,GO:0097708,GO:0098588,GO:0098590,GO:0098655,GO:0098656,GO:0098791,GO:0098805,GO:0099402,GO:0099503,GO:1900619,GO:1900620,GO:1901374,GO:1901474,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901682,GO:2000012
EggNOG free text desc.Choline transporter. Source PGD
EggNOG OGs1MBYW@121069,KOG1362@1,KOG1362@2759
Ec32 ortholog descriptionCholine transporter-like
Ec32 orthologEc-12_007070.1
COG Functional cat.I
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Exons2
Model size453
Cds size453
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815750.1973722-CDS-M-pyrifera_M_contig123137:9..1911622815750.1973722-CDS-M-pyrifera_M_contig123137:9..191Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123137 10..191 +
1692277551.7560654-CDS-M-pyrifera_M_contig123137:9..1911692277551.7560654-CDS-M-pyrifera_M_contig123137:9..191Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123137 10..191 +
1622815750.2112663-CDS-M-pyrifera_M_contig123137:251..5221622815750.2112663-CDS-M-pyrifera_M_contig123137:251..522Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123137 252..522 +
1692277551.7683544-CDS-M-pyrifera_M_contig123137:251..5221692277551.7683544-CDS-M-pyrifera_M_contig123137:251..522Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123137 252..522 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123137.4746.1prot_M-pyrifera_M_contig123137.4746.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig123137 10..522 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig123137.4746.1

>prot_M-pyrifera_M_contig123137.4746.1 ID=prot_M-pyrifera_M_contig123137.4746.1|Name=mRNA_M-pyrifera_M_contig123137.4746.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
MGCCGNRKVADMTAEERENMCRVQAKGRKCTDVLFLVLFILYWIGMLYVM
AIGAIKGEPEALIFARDYNGDVCGGDKNPGAAKYQCSDSSKCKYVYYPRL
NEDLLDAAVGAAQSASVDVTKIPLTGVCLPTCPTRGDVVCLYDYDNENGT
P
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mRNA from alignment at M-pyrifera_M_contig123137:10..522+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig123137.4746.1 ID=mRNA_M-pyrifera_M_contig123137.4746.1|Name=mRNA_M-pyrifera_M_contig123137.4746.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=513bp|location=Sequence derived from alignment at M-pyrifera_M_contig123137:10..522+ (Macrocystis pyrifera P11B4 male)
ATGGGGTGCTGCGGAAACCGAAAGGTGGCTGACATGACTGCAGAGGAGCG CGAGAACATGTGCAGGGTGCAGGCGAAGGGCCGCAAGTGCACCGATGTGC TGTTCCTCGTCTTGTTCATCCTCTACTGGATCGGGATGCTGTACGTCATG GCCATCGGCGCCATCAAGGGAGAGCCTGAAGCGTACGTGAGCCCTTTTCC ACCCCTACCATTGCACTTGGTCTCACCCTGTGCCCCACACAGCCTCATTT TCGCTCGCGATTACAACGGCGACGTGTGCGGCGGGGACAAGAACCCCGGC GCGGCCAAGTACCAGTGCTCAGACAGCAGCAAGTGCAAGTATGTGTACTA CCCTCGTCTGAACGAGGACTTGCTGGACGCGGCGGTCGGCGCAGCCCAGT CAGCGTCAGTTGACGTTACGAAAATCCCGCTCACCGGCGTCTGCTTGCCC ACTTGCCCCACCCGAGGCGACGTTGTGTGCTTGTACGACTACGACAATGA GAACGGCACGCCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig123137:10..522+

>mRNA_M-pyrifera_M_contig123137.4746.1 ID=mRNA_M-pyrifera_M_contig123137.4746.1|Name=mRNA_M-pyrifera_M_contig123137.4746.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig123137:10..522+ (Macrocystis pyrifera P11B4 male)
ATGGGGTGCTGCGGAAACCGAAAGGTGGCTGACATGACTGCAGAGGAGCG
CGAGAACATGTGCAGGGTGCAGGCGAAGGGCCGCAAGTGCACCGATGTGC
TGTTCCTCGTCTTGTTCATCCTCTACTGGATCGGGATGCTGTACGTCATG
GCCATCGGCGCCATCAAGGGAGAGCCTGAAGCATGGGGTGCTGCGGAAAC
CGAAAGGTGGCTGACATGACTGCAGAGGAGCGCGAGAACATGTGCAGGGT
GCAGGCGAAGGGCCGCAAGTGCACCGATGTGCTGTTCCTCGTCTTGTTCA
TCCTCTACTGGATCGGGATGCTGTACGTCATGGCCATCGGCGCCATCAAG
GGAGAGCCTGAAGCCCTCATTTTCGCTCGCGATTACAACGGCGACGTGTG
CGGCGGGGACAAGAACCCCGGCGCGGCCAAGTACCAGTGCTCAGACAGCA
GCAAGTGCAAGTATGTGTACTACCCTCGTCTGAACGAGGACTTGCTGGAC
GCGGCGGTCGGCGCAGCCCAGTCAGCGTCAGTTGACGTTACGAAAATCCC
GCTCACCGGCGTCTGCTTGCCCACTTGCCCCACCCGAGGCGACGTTGTGT
GCTTGTACGACTACGACAATGAGAACGGCACGCCCCCTCATTTTCGCTCG
CGATTACAACGGCGACGTGTGCGGCGGGGACAAGAACCCCGGCGCGGCCA
AGTACCAGTGCTCAGACAGCAGCAAGTGCAAGTATGTGTACTACCCTCGT
CTGAACGAGGACTTGCTGGACGCGGCGGTCGGCGCAGCCCAGTCAGCGTC
AGTTGACGTTACGAAAATCCCGCTCACCGGCGTCTGCTTGCCCACTTGCC
CCACCCGAGGCGACGTTGTGTGCTTGTACGACTACGACAATGAGAACGGC
ACGCCC
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