mRNA_M-pyrifera_M_contig123041.4737.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: A0A8J2T226_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T226_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 7.990e-17 Identity = 49/141 (34.75%), Postives = 82/141 (58.16%), Query Frame = 1
Query: 1 ESNRIVEMLKDKEMRKEFFKVMEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLESDAGLACFANVGYTDKVDKPGS-GVSG-----IPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQLL 405
E N+ + +DKE RK + ++++SDPK+RAEQ+ Y+RE+EA+ + P+ +++ P A F ++ + + G F NV + +V++P S V+G +P + PPR E + K+ FD FHP + A S R + LL
Sbjct: 49 EQNKFTKAFQDKEFRKMMAEYVDEISDPKHRAEQDAYIREMEAKGETPKDKRVIHPSAGFVVKTKKEDGAKLFINVVSSVEVEQPTSTNVNGGQQWQLPHLLGPPRMERDKKDNSVGAFDCCFHPLALQHAESARPFRDLL 189
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: F0YEB3_AURAN (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEB3_AURAN) HSP 1 Score: 80.1 bits (196), Expect = 8.990e-15 Identity = 46/137 (33.58%), Postives = 72/137 (52.55%), Query Frame = 1
Query: 31 DKEMRKEFFKVMEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLES-----DAGLACFANVGYTDKVDKP------GSGVSGIPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQLLA 408
D E RK + ++++SDPKYR EQ QY+RE+EA+ + P+G L+ P A F ++ G F N+ ++K+ +P G +P + PPR E + K+ TFD FHP + A + + + LLA
Sbjct: 1316 DPEFRKMMAEYVDEISDPKYREEQNQYIREMEAKGETPKGKALIHPKAGFVVKTRKMGKADHTGAKVFINIVSSEKLQEPEATPCDGGSRWALPHLLGPPRMERDKKDATVSTFDCCFHPAAVQRANASKPFRDLLA 1452
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: A0A6U1AP86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AP86_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 7.790e-13 Identity = 45/125 (36.00%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 64 MEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLESD-----AGLACFANVGYTDKVDKPGS-----GVS-GIPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQLL 405
M+++SDPK+RAEQE Y+ +LE Q+PEG +LV+P AAF ++ ++ G F NV +DK+ +P + GVS +P+ P R E + TFD FHP+ + A+ + + L+
Sbjct: 65 MDEISDPKHRAEQEAYITKLENEDQVPEGKELVRPSAAFVVKTHTEDADKAKGSKVFINVVQSDKIAEPKATPQKGGVSYSLPLSLGPKRMESDKGGATVPTFDACFHPKALQLAKRDKRFKDLV 189
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: H3GGQ4_PHYRM (Protein kintoun n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGQ4_PHYRM) HSP 1 Score: 73.6 bits (179), Expect = 1.600e-12 Identity = 50/143 (34.97%), Postives = 72/143 (50.35%), Query Frame = 1
Query: 1 ESNRIVEMLKDKEMRKEFFKVMEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLESDAGLACFANVGYTDKVDKPGS-----GVSG----IPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQL 402
E ++ + +KD E R + M+++SDP+ RAE EQYL +LE ++P QLVKP F ++ + +A F NV ++K+ P S G G +P P R E + TFDV FHP VI A S Y +
Sbjct: 38 EQHKFLSAMKDAEFRSLLNEYMQEISDPRNRAETEQYLAQLENEQKVPTDKQLVKPTPGFVIKTKWEASQKIFVNVCSSEKMQPPSSTKVTTGQQGSSWNLPYSLGPERLEPDKGGSSVPTFDVCFHPRVIEFAMSRGDYRHM 180
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: A0A6A4G3X5_9STRA (Protein kintoun n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4G3X5_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.610e-12 Identity = 51/141 (36.17%), Postives = 73/141 (51.77%), Query Frame = 1
Query: 1 ESNRIVEMLKDKEMRKEFFKVMEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLESDAGLACFANVGYTDKVDKPGSG--VSG----IPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQLL 405
E ++ + +KD E R + M+++SDP+ RAE EQYL +LE ++P QLVKP F ++ + DA F NV +DK+ P S SG +P P R E + TFDV FHP VI A + Y ++
Sbjct: 58 EQHKFLSAMKDPEFRSLLNEYMQEISDPRNRAETEQYLSQLENEHKVPTDKQLVKPTPGFVVKTKWDATHKVFVNVCSSDKMQPPSSTRVTSGQSWNLPYSLGPERLEPDKGGSGVPTFDVCFHPRVIEFAVAQTEYRHMV 198
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: D7FKK0_ECTSI (PIH1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK0_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 2.270e-12 Identity = 47/131 (35.88%), Postives = 66/131 (50.38%), Query Frame = 1
Query: 64 MEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLESDAGLA------CFANVGYTDKVDKPGSGVSG---------IPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQLLAL 411
ME+M DPK RAEQE Y+ ELE++ ++PEG ++V P F ++ G F NV +DK+ KP S +S +PV P R E + T TFDV +HPE + A + L+ L
Sbjct: 50 MEEMQDPKQRAEQELYISELESQNRVPEGKEVVHPLPGFVIKTRFTRGSKDAEPEKLFTNVVTSDKLAKPYSKISNSRPGGEAWSLPVAVGPLRKEKDKGGGSTTTFDVCYHPEALVRADRLSAFRDLVVL 180
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: A0A2P4XKG5_9STRA (Protein kintoun n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XKG5_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 7.510e-12 Identity = 48/144 (33.33%), Postives = 72/144 (50.00%), Query Frame = 1
Query: 1 ESNRIVEMLKDKEMRKEFFKVMEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLESDAGLACFANVGYTDKVDKPGS-----GVSG----IPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQLL 405
E + + +KD E R + M+++SDP+ RAE EQYL +LE ++P QLVKP F ++ + ++ F NV +DK+ P S G G +P P R E + TFDV FHP V+ A + Y ++
Sbjct: 34 EQQKFLSAMKDPEFRSLLNEYMQEISDPRNRAETEQYLTQLENEQKVPTDKQLVKPKPGFVVKTKWESTQKVFVNVCSSDKMQPPSSTRVMTGQQGTSWNLPYSLGPERLESDKGGSGVPTFDVCFHPRVVEFAMARTDYRHMV 177
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: G4ZSA8_PHYSP (Protein kintoun n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZSA8_PHYSP) HSP 1 Score: 71.6 bits (174), Expect = 7.520e-12 Identity = 51/144 (35.42%), Postives = 70/144 (48.61%), Query Frame = 1
Query: 1 ESNRIVEMLKDKEMRKEFFKVMEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLESDAGLACFANVGYTDKVDKPGS-----GVSG----IPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQLL 405
E + + +KD E R ME++SDP+ RAE EQYL +LE ++P QLVKP F ++ + DA F NV +DK+ P S G G +P R E + TFDV FHP VI A + Y ++
Sbjct: 29 EQQKFLSAMKDPEFRSLLNDYMEEISDPRNRAETEQYLAQLENEQKVPADKQLVKPKPGFVVKTKWDAAQKLFVNVCSSDKMQPPSSTRVTSGQQGTSWNLPYSLGLERLEPDKGGSGVPTFDVCFHPRVIEFAMARADYRHMV 172
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: A0A421G292_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G292_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.330e-11 Identity = 49/144 (34.03%), Postives = 71/144 (49.31%), Query Frame = 1
Query: 1 ESNRIVEMLKDKEMRKEFFKVMEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLESDAGLACFANVGYTDKVDKPGS--------GVS-GIPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQLL 405
E ++ + ++D E R M+++SDP+ RAE EQYL +LE ++P QLVKP F ++ + D F NV +DK+ P S G S +P P R E + TFDV FHP VI A + Y ++
Sbjct: 25 EQHKFLSAMRDSEFRSLLNDYMQEISDPRNRAETEQYLSQLENEQKVPVDKQLVKPKPGFVVKTKWDGDQKIFLNVCSSDKLQPPSSTRVTTDKQGTSWNLPYSLGPERLEPDKGGSSVPTFDVCFHPRVIEFAVARTDYKDMV 168
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Match: A0A7S3JX15_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JX15_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.420e-11 Identity = 38/141 (26.95%), Postives = 76/141 (53.90%), Query Frame = 1
Query: 13 IVEMLKDKEMRKEFFKVMEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDAAFALQLESDAGLACFANVGYTDKVDKPGSGVSG------IPVVTSPPRYELNAKEERTLTFDVVFHPEVIAGARSGRFYMQLLALVT 417
I++ KD + K F + ++++SDPK+R EQ +Y++++EA +P +L+ P + F ++ +G F N+ +D+V++ S +P + P R E + K+ T+D FHP I A+ + + +++ +T
Sbjct: 48 ILKSAKDPKFHKMFAEYVDEISDPKHREEQNEYIKQMEAGGHLPPNKRLLYPKSGFVIKTHKASGEKLFVNMVQSDQVEEGKSNRQNGGTHFELPHILGPVRLERDKKDSTVSTYDCCFHPTTIERAKISKPFRDMISTIT 188 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123041.4737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123041.4737.1 >prot_M-pyrifera_M_contig123041.4737.1 ID=prot_M-pyrifera_M_contig123041.4737.1|Name=mRNA_M-pyrifera_M_contig123041.4737.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp MLKDKEMRKEFFKVMEDMSDPKYRAEQEQYLRELEARAQIPEGMQLVKPDback to top mRNA from alignment at M-pyrifera_M_contig123041:3..419+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123041.4737.1 ID=mRNA_M-pyrifera_M_contig123041.4737.1|Name=mRNA_M-pyrifera_M_contig123041.4737.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig123041:3..419+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123041:3..419+ >mRNA_M-pyrifera_M_contig123041.4737.1 ID=mRNA_M-pyrifera_M_contig123041.4737.1|Name=mRNA_M-pyrifera_M_contig123041.4737.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig123041:3..419+ (Macrocystis pyrifera P11B4 male)back to top |