mRNA_M-pyrifera_M_contig122998.4727.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: A0A059FA61_9PROT (Group 1 glycosyl transferase n=5 Tax=Hyphomonas TaxID=85 RepID=A0A059FA61_9PROT) HSP 1 Score: 60.8 bits (146), Expect = 4.750e-8 Identity = 40/149 (26.85%), Postives = 73/149 (48.99%), Query Frame = 1
Query: 1 YVDTARDADAIICLSEPTRTEIASELAVDPNTIFVSPPSVDDSLWVDPVASEYELISDDDIAEVRRQVGVTFTYLVYPAAFRPHKNHLRLLEAMRYVYTNLQL---VLTTGETHNPGAAEAMQRAIDDKNMSHRVLVAGALPRAQYLAL 438
Y R + AII S+ + ++ ++ AV PN + + P + L + +S++D AE R + + Y+ YP PHKNHLRL EAM ++ + +++TG H P + EA+ + + + ++V G + + A+
Sbjct: 153 YRAACRTSHAIIVNSQWIKDDVVAQFAVSPNKVQIIPEAAPTQLLAE--------VSEEDKAETRAKYVLPERYIFYPNNTWPHKNHLRLFEAMAWLRDEKGVTVPLVSTGARHEP-SREALDNRVRELGLENQVQFLGFVSNEELRAI 292
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: A0A838LH89_9ACTN (Glycosyltransferase family 4 protein n=2 Tax=unclassified Nocardioides TaxID=2615069 RepID=A0A838LH89_9ACTN) HSP 1 Score: 55.8 bits (133), Expect = 2.580e-6 Identity = 48/148 (32.43%), Postives = 69/148 (46.62%), Query Frame = 1
Query: 1 YVDTARDADAIICLSEPTRTEIASELAVDPNTIFVSPPSVDDSLWVDPVASEYELISDDDIAEVRRQVGVTFTYLVYPAAFRPHKNHLRLLEAMRYV---YTNLQLVLTTGETHNPGAAEAMQRAIDDKNMSHRVLVAGALPRAQYLA 435
Y R A A+I +SE ++ +I +DP+T+ V+ VD S + PV E E +++YPA PHKNH RLLEAMR V L+LVLT G + G + + +D + + R + RA LA
Sbjct: 155 YDRPTRRASAVITISEFSKQQIVRHYGLDPDTVHVAHLGVDTSHFA-PVVGERE------------------DFVLYPARGWPHKNHGRLLEAMRLVREEVPGLRLVLTGGGLDSLG--DDLPEWVDRRGLVSREELLSLYRRASVLA 281
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: UPI001FFB5CCB (glycosyltransferase family 4 protein n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001FFB5CCB) HSP 1 Score: 54.3 bits (129), Expect = 8.890e-6 Identity = 40/149 (26.85%), Postives = 71/149 (47.65%), Query Frame = 1
Query: 1 YVDTARDADAIICLSEPTRTEIASELAVDPNTIFVSPPSVDDSLWVDPVASEYELISDDDIAEVRRQVGVTFTYLVYPAAFRPHKNHLRLLEAMRYVYTN---LQLVLTTGETHNPGAAEAMQRAIDDKNMSHRVLVAGALPRAQYLAL 438
+V +R A IIC SE +++I V + V + P+ ++ EVR ++ + +++YPA F PHKNHLRL++A + V L+LVLT + + E + RA+ + + +L G + ++ A+
Sbjct: 131 HVCLSRRAGRIICESEYVKSDIVRFFGVRDECVAV--------IAAPPLRQRTAEFDAAELEEVRGRLRLPDRFILYPAQFWPHKNHLRLIDAFKQVVAKAPELKLVLTGKKRDD---YEVVMRAVGEAGLEGNILHLGYIEQSDLQAI 268
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: UPI0019933B91 (Glycosyltransferase family 4 protein n=1 Tax=Candidatus Saccharibacteria bacterium TaxID=2026720 RepID=UPI0019933B91) HSP 1 Score: 53.9 bits (128), Expect = 1.180e-5 Identity = 41/118 (34.75%), Postives = 58/118 (49.15%), Query Frame = 1
Query: 1 YVDTARDADAIICLSEPTRTEIASELAVDPNTIFVSPPSVDDSLWVDPVASEYELISDDDIAEVRRQVGVTFTYLVYPAAFRPHKNHLRLLEAMRYV---YTNLQLVLTTGETHNPGA 345
Y AR ADA+I +SE ++ + + L + P I V+ +VD A +Y R G ++++YPA PHKNH RL+ AMR V ++QLVLT G GA
Sbjct: 139 YEGAARRADAVITISEFAKSRMVALLDLAPGKIHVAHLAVD--------AEQY-----------RPNFGARKSFVLYPARGWPHKNHTRLIAAMRRVRDEIPDMQLVLTGGGLDTLGA 237
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: A0A354F3Y5_9BACT (Uncharacterized protein n=5 Tax=Nitrospirae TaxID=40117 RepID=A0A354F3Y5_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 1.260e-5 Identity = 37/122 (30.33%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 1 YVDTARDADAIICLSEPTRTEIASELAVDPNTIFVSPPS-------VDDSLWVDPVASEYELISDDDIAEVRRQVGVTFTYLVYPAAFRPHKNHLRLLEA---MRYVYTNLQLVLTTGETHN 336
Y +A AD II +SE T+ + + + I V+ P +DD+ ++ V S+Y+L+S+ +++YPA+ PHKNH++LLEA +R Y+ + V+ TG + N
Sbjct: 175 YRPSAERADVIIAISEYTKKTLIEKYNIKAKKIVVAYPGCSKDFKKIDDTALLNSVRSKYDLLSE---------------FMLYPASTWPHKNHIKLLEAISILRSKYSFEKPVVLTGASQN 281
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: UPI000BEA95DD (FkbM family methyltransferase n=1 Tax=Bradyrhizobium ottawaense TaxID=931866 RepID=UPI000BEA95DD) HSP 1 Score: 53.5 bits (127), Expect = 1.940e-5 Identity = 41/144 (28.47%), Postives = 69/144 (47.92%), Query Frame = 1
Query: 1 YVDTARDADAIICLSEPTRTEIASELAVDPNTIFVSPPSVDDSLWVDPVASEYELISDDDIAEVRRQVGVTFTYLVYPAAFRPHKNHLRLLEAMRYVY-----TNLQLVLTTGETHNPGAAEAMQRAIDDKNMSHRVLVAGALP 417
Y +A ADAI+ S+ R ++ +++ V P +F P + W V + S +D + + Y+VYPA F PHKNH RL++A+R V +L+LV T H+ A++ I++ + V+ +P
Sbjct: 736 YSLSASLADAIVVSSDFVRDDLITQMQVPPTKVFTVPVT-----WDPRVIAGLSAFSIEDAIS---RYNLPSRYVVYPAQFWPHKNHARLVQALRIVRDKRPNADLKLVFTGYRGHS--GWPAVKATIEELGLGPHVVCIDHVP 869
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: UPI0015EFAE6A (glycosyltransferase family 4 protein n=1 Tax=Pseudarthrobacter sp. B4EP4b TaxID=2590664 RepID=UPI0015EFAE6A) HSP 1 Score: 52.4 bits (124), Expect = 4.090e-5 Identity = 35/111 (31.53%), Postives = 51/111 (45.95%), Query Frame = 1
Query: 1 YVDTARDADAIICLSEPTRTEIASELAVDPNTIFVSPPSVDDSLWVDPVASEYELISDDDIAEVRRQVGVTFTYLVYPAAFRPHKNHLRLLEAMRYVYTN---LQLVLTTG 324
Y ARDADAI+ +S+ + I + L +DP IF + V D E +G +++YPA HKNH L EAM+ + + L+L+LT G
Sbjct: 136 YEKAARDADAIVTISDFAKESIVNHLGIDPGKIFTAHLGV-------------------DAKEFTPNLGQRGKFIMYPARGWKHKNHATLFEAMKLLAVSDPELRLILTGG 227
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: A0A496Q3N8_9BACT (Glycos_transf_1 domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A496Q3N8_9BACT) HSP 1 Score: 52.4 bits (124), Expect = 4.190e-5 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 220 YLVYPAAFRPHKNHLRLLEAMRYVYTNL-------QLVLT-TGETHNPGAAEAMQRAIDDKNMSHRVLVAGALPRAQYLA 435
+ +YPA F PHKNHLRLLEA R + LVLT G T A + + AI ++ ++ RV+ AG L RA YLA
Sbjct: 211 FFIYPANFWPHKNHLRLLEAFRLFLDAVPERSDVWSLVLTGAGRT----AGDDVDCAIQEQGLAGRVIRAGYLERADYLA 286
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: A0A4Q5N5H9_9CELL (D-inositol 3-phosphate glycosyltransferase n=2 Tax=Cellulomonas sp. HLT2-17 TaxID=1259133 RepID=A0A4Q5N5H9_9CELL) HSP 1 Score: 52.4 bits (124), Expect = 4.190e-5 Identity = 39/118 (33.05%), Postives = 54/118 (45.76%), Query Frame = 1
Query: 1 YVDTARDADAIICLSEPTRTEIASELAVDPNTIFVSPPSVDDSLWVDPVASEYELISDDDIAEVRRQVGVTFTYLVYPAAFRPHKNHLRLLEAMRYVYTN---LQLVLTTGETHNPGA 345
Y AR ADA+I +SE + I + L +DP I V+ V D A +G +L YPA HKNH RL+EA+R + + L+LVLT G + G+
Sbjct: 173 YDAAARRADAVITISEFAKASIVARLGIDPGRITVAHLGV-------------------DAAAYSPHLGERSNFLFYPARGWAHKNHARLVEAVRLLRVDDPTLRLVLTGGGLESLGS 271
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Match: UPI0019802136 (glycosyltransferase family 4 protein n=1 Tax=Rhodoferax bucti TaxID=2576305 RepID=UPI0019802136) HSP 1 Score: 52.0 bits (123), Expect = 5.750e-5 Identity = 40/137 (29.20%), Postives = 65/137 (47.45%), Query Frame = 1
Query: 22 ADAIICLSEPTRTEIASELAVDPNTIFVSPPSVDDSLWVDPVASEYELISDDDIAEVRRQVGVTFTYLVYPAAFRPHKNHLRLLEAMRYV---YTNLQLVLTTGETHNPGAAEAMQRAIDDKNMSHRVLVAGALPRA 423
+DA++ SE R ++ V PN + +W P + L+ A+ G+ ++ YPA F PHKNHLRLLEA+ V + ++ LVL+ G+ H +A +A+ + +V G +P A
Sbjct: 172 SDAVLVDSEVGRVQVVESYHV-PN----------ERIWQLPYVAPSYLLDTTPRADFDAHYGLPERFVFYPAQFWPHKNHLRLLEAISIVANAHPDIALVLSGGKQHAFEQVQAQAKALC---IDSKVFFVGYVPDA 294 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122998.4727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122998.4727.1 >prot_M-pyrifera_M_contig122998.4727.1 ID=prot_M-pyrifera_M_contig122998.4727.1|Name=mRNA_M-pyrifera_M_contig122998.4727.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp YVDTARDADAIICLSEPTRTEIASELAVDPNTIFVSPPSVDDSLWVDPVAback to top mRNA from alignment at M-pyrifera_M_contig122998:80..517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122998.4727.1 ID=mRNA_M-pyrifera_M_contig122998.4727.1|Name=mRNA_M-pyrifera_M_contig122998.4727.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig122998:80..517+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122998:80..517+ >mRNA_M-pyrifera_M_contig122998.4727.1 ID=mRNA_M-pyrifera_M_contig122998.4727.1|Name=mRNA_M-pyrifera_M_contig122998.4727.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig122998:80..517+ (Macrocystis pyrifera P11B4 male)back to top |