mRNA_M-pyrifera_M_contig122810.4686.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A2E8L8F2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L8F2_9ACTN) HSP 1 Score: 201 bits (510), Expect = 1.240e-56 Identity = 108/171 (63.16%), Postives = 131/171 (76.61%), Query Frame = 1
Query: 1 RDSSATSLGPSLDHIDPDMVELDESLLGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNRIVDLELWADHFTTGVDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
+DSSAT L SL+H+DPD VELDESL+GR+ I+++EDFA DN IG F+I+F D + ETV V GIF D+SIYGNR++ LELW D + TG DQF+SV +G+ ED ARAAI ++TD Y Q+ VD+REEFQER E ID L V NVLL V I+IALLGIAITLALSVFE
Sbjct: 763 QDSSATDLANSLEHLDPDFVELDESLIGRDTIWIYEDFAADNLLEIGDFFEIEFPDQVVETVTVGGIFTDASIYGNRVISLELWQDRYPTGGDQFLSVTTTNGIDEDRARAAILAITDSYPQLNVDSREEFQERQENSIDQALVVINVLLTVAIVIALLGIAITLALSVFE 933
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A7K1Z6V6_9ACTN (FtsX-like permease family protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z6V6_9ACTN) HSP 1 Score: 197 bits (502), Expect = 1.540e-55 Identity = 105/171 (61.40%), Postives = 129/171 (75.44%), Query Frame = 1
Query: 1 RDSSATSLGPSLDHIDPDMVELDESLLGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNRIVDLELWADHFTTGVDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
RDSSA L SLDH+DPD V LDESL GRN+I+VHED A DN F +GS FDI+F DG ETV VAGIF DSSIYGNR++ LELWAD F + DQF+SV + DGV+E++ARAA++S TD+Y + V+TR+EFQ+R GQ+DS LTV NVL+ V ++IA ALSVFE
Sbjct: 764 RDSSAADLAASLDHLDPDFVALDESLFGRNSIWVHEDMATDNDFVLGSAFDIEFPDGTVETVTVAGIFTDSSIYGNRVISLELWADRFPSSQDQFISVNIRDGVSEEQARAALQSYTDDYPTLNVETRDEFQDRQAGQVDSALTVINVLVGVSVLIAXXXXXXXXALSVFE 934
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A2E4XJU7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4XJU7_9ACTN) HSP 1 Score: 111 bits (277), Expect = 3.280e-25 Identity = 67/156 (42.95%), Postives = 103/156 (66.03%), Query Frame = 1
Query: 55 MVELDESLLGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNR-IVDLELWADH--FTTGVDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
++++DESL G NA+++HED A G +GS ++F D + +AGIF+ S+ + ++D + A + D FV VLV +GV+E ARAAIE+V +Y QI T+EE +++++ QI+ LTV +VLL + +I+A+LG+AITLALSVFE
Sbjct: 648 IIDIDESLFGNNAVYLHEDEAQKYGVVVGSTLQVEFVDQSQRALKIAGIFSSKSVIDSGWLLDSSVKASNEKLVPQSDDFVGVLVREGVSEQAARAAIETVIGDYEQIEARTKEELKDQAQDQINQTLTVVSVLLFISVILAVLGVAITLALSVFE 803
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A2E3JA95_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E3JA95_9ACTN) HSP 1 Score: 109 bits (273), Expect = 1.130e-24 Identity = 62/161 (38.51%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 40 HIDPDMVELDESLLGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNR-IVDLELWADH--FTTGVDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
H D +++++E L+G NA+++HED A ++GS ++F D + ++VAGIF+ S+ + +VD ++ + D FV VL+ DGV+E EAR A+E+V ++ Q+ T++E +E +E QI+ LT+ ++LL + +++A+LG+AITLALSVFE
Sbjct: 643 HFDIGLIDMNEVLIGNNAVYLHEDEAKKYELSLGSSIPVEFIDQSQKDLIVAGIFSSKSVIDSGWLVDSSVYESNANLVPQTDDFVGVLINDGVSEQEAREALEAVLVDFEQVKAQTKDEVKEDAENQINQTLTIVSILLFISVVLAVLGVAITLALSVFE 803
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A349B7F0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B7F0_9ACTN) HSP 1 Score: 107 bits (266), Expect = 9.750e-24 Identity = 69/145 (47.59%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 79 LGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNRIVDLELWADHFTTGVDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
LG + IFVHED A D G G E + F+ +T V GI AD++ GN ++ E +FT D V ADGVT EAR+A+E+ E+ Q +D R+EF + E QID IL NVLLL+ +IIA+LGIA TLALSVFE
Sbjct: 601 LGADGIFVHEDPARDLGLEAGDEVALAFSATGEQTFTVVGIHADATFAGNYVISTEAHDANFTDVTDGVVMARAADGVTPAEARSAVEAALVEFPQADIDDRQEFLDAQEAQIDQILVTVNVLLLLAVIIAVLGIANTLALSVFE 745
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A6L8H503_9ACTN (FtsX-like permease family protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L8H503_9ACTN) HSP 1 Score: 106 bits (264), Expect = 1.750e-23 Identity = 68/158 (43.04%), Postives = 92/158 (58.23%), Query Frame = 1
Query: 40 HIDPDMVELDESLLGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNRIVDLELWADHFTTGVDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
H+D D V G N + VH D A+ G ++G ++ G VVAGIF DS++ G + E W +F T VD F+SVL ADGV D AR+AI+ V + Y Q+ V +REEF++ QID L + NV L + ++IA+LGI TLALSV E
Sbjct: 455 HLDVDPVAGTVRDPGPNDLLVHVDQAETYGLSVGDSLAVEVIGGQRADWVVAGIFEDSAVAGEWVTSAETWDSYFDTNVDLFLSVLAADGVALDVARSAIDDVAEGYPQVTVRSREEFRDAQTDQIDQALIIVNVFLGLSLVIAVLGIVATLALSVVE 612
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A6G2K656_9ACTN (FtsX-like permease family protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6G2K656_9ACTN) HSP 1 Score: 106 bits (264), Expect = 1.830e-23 Identity = 68/158 (43.04%), Postives = 92/158 (58.23%), Query Frame = 1
Query: 40 HIDPDMVELDESLLGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNRIVDLELWADHFTTGVDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
H+D D V G N + VH D A+ G ++G ++ G VVAGIF DS++ G + E W +F T VD F+SVL ADGV D AR+AI+ V + Y Q+ V +REEF++ QID L + NV L + ++IA+LGI TLALSV E
Sbjct: 646 HLDVDPVAGTVRDPGPNDLLVHVDQAETYGLSVGDSLAVEVIGGQRADWVVAGIFEDSAVAGEWVTSAETWDSYFDTNVDLFLSVLAADGVALDVARSAIDDVAEGYPQVTVRSREEFRDAQTDQIDQALIIVNVFLGLSLVIAVLGIVATLALSVVE 803
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A2E5NUM1_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5NUM1_9ACTN) HSP 1 Score: 105 bits (263), Expect = 2.490e-23 Identity = 64/171 (37.43%), Postives = 101/171 (59.06%), Query Frame = 1
Query: 1 RDSSATSLGPSLDHIDPDMVELDESLLGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNRIVDLELWADHFTTGVDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
+D A L H+D ++E E G+ + +H D A D G + G E ++F G T + VAGIF DS++ GN +VD+ ++ + T ++SVL +G D +RAA+E+ TD Y Q+ V+ R E +E E Q+D +L++ V L + ++IA+LGI T+ALSV+E
Sbjct: 635 KDLVAAELAILESHMDIQVIEGSEFGAGKGGVLIHVDPAADLGLSTGDEITLEFPGGRTSELTVAGIFQDSTLLGNWVVDVSVFDTYLPTAPLAWISVLFPEGADTDASRAAVEAYTDAYPQVAVEDRTELRETQEKQLDQLLSIIQVFLGLSLLIAVLGITNTMALSVYE 805
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A6B1BX01_9ACTN (FtsX-like permease family protein n=5 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1BX01_9ACTN) HSP 1 Score: 105 bits (262), Expect = 3.380e-23 Identity = 65/158 (41.14%), Postives = 93/158 (58.86%), Query Frame = 1
Query: 40 HIDPDMVELDESLLGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNRIVDLELWADHFTTGVDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
H D ++ + G + +H D ADD +G +++F+DG T T VA IF +++I+G+ ++DL W + D F+S L A G T D+AR AIE T Y Q+ V + EFQE E QID+ L V N L + +I+AL+G+A TLALSVFE
Sbjct: 630 HFDIEVTRGSLTDAGPGDVALHTDQADDLSVGVGDPVELEFSDGQTATFEVAAIFDNNAIFGSWLIDLADWDRYLVEQEDGFISALTAPGYTADQAREAIEQATLAYPQLNVRDQAEFQETQESQIDTFLGVVNAFLAISLIVALMGVANTLALSVFE 787
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Match: A0A2D6UWJ9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6UWJ9_9ACTN) HSP 1 Score: 105 bits (262), Expect = 3.400e-23 Identity = 62/152 (40.79%), Postives = 100/152 (65.79%), Query Frame = 1
Query: 67 DESLLGRNAIFVHEDFADDNGFAIGSEFDIDFNDGITETVVVAGIFADSSIYGNR-IVDLELWADHFTTG--VDQFVSVLVADGVTEDEARAAIESVTDEYSQIFVDTREEFQERSEGQIDSILTVFNVLLLVVIIIALLGIAITLALSVFE 513
D +LL NA+++HED A G IGS ++F D +VVAGIF+ S+ + ++D +++ + D FV VL+ +GV+ED+AR A+ESV +Y Q+ T++E ++ +E QI+ +T+ +VLL + +++A+LG+AITLALSVFE
Sbjct: 679 DSTLLEDNALYIHEDEASKYGLGIGSFISVEFMDQSQMDLVVAGIFSSKSVIDSGWLLDSSVYSSNVNLAPQTDDFVGVLIKNGVSEDQARVALESVLVDYEQVRAQTKDEVKDEAENQINQTVTIVSVLLFISVVLAVLGVAITLALSVFE 830 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122810.4686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122810.4686.1 >prot_M-pyrifera_M_contig122810.4686.1 ID=prot_M-pyrifera_M_contig122810.4686.1|Name=mRNA_M-pyrifera_M_contig122810.4686.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp RDSSATSLGPSLDHIDPDMVELDESLLGRNAIFVHEDFADDNGFAIGSEFback to top mRNA from alignment at M-pyrifera_M_contig122810:14..526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122810.4686.1 ID=mRNA_M-pyrifera_M_contig122810.4686.1|Name=mRNA_M-pyrifera_M_contig122810.4686.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=513bp|location=Sequence derived from alignment at M-pyrifera_M_contig122810:14..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122810:14..526+ >mRNA_M-pyrifera_M_contig122810.4686.1 ID=mRNA_M-pyrifera_M_contig122810.4686.1|Name=mRNA_M-pyrifera_M_contig122810.4686.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig122810:14..526+ (Macrocystis pyrifera P11B4 male)back to top |