mRNA_M-pyrifera_M_contig122627.4658.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: UPI001BB19D2B (uncharacterized protein LOC121411139 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB19D2B) HSP 1 Score: 60.1 bits (144), Expect = 1.170e-8 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 16 EVSLCVAYLLCVPPLGLFGAVHWYLERED-RVLRLFTLNFAVFGWILDLFLLPSLVARANQ 195
++SL AYL+ +PP+GLFG H+YL R V + FT V GW +DLF +P LV +AN+
Sbjct: 169 KISLIDAYLMWLPPMGLFGIHHFYLGRTRYAVFQTFTFGLNVIGWTVDLFRMPWLVRKANE 229
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: UPI001E1D2726 (uncharacterized protein LOC123557541 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2726) HSP 1 Score: 59.7 bits (143), Expect = 1.720e-8 Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 16 EVSLCVAYLLCVPPLGLFGAVHWYLEREDRVLRLFTLNFAVFG--WILDLFLLPSLVARA 189
E SL AY+L +PPLG+FGA H+YL R+ ++T F +FG WI+DLF +P LV +A
Sbjct: 130 EKSLGTAYILALPPLGIFGAYHYYLGNV-RLGLVYTFTFGIFGIGWIVDLFRMPRLVRKA 188
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: R7TJ04_CAPTE (TM2 domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TJ04_CAPTE) HSP 1 Score: 56.6 bits (135), Expect = 9.360e-8 Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 16 EVSLCVAYLLCVPPLGLFGAVHWYLEREDR--VLRLFTLNFAVFGWILDLFLLPSLVARANQQ---RLESAR 216
L AY++ +PPLGLFG H YL + + +L FTL GWI DLF +P LV RAN + R+ES+R
Sbjct: 68 RTRLSSAYVMSIPPLGLFGG-HHYLMKNTKWGLLYTFTLGLLGCGWIADLFRMPVLVTRANTENKLRMESSR 138
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: UPI001BB212EA (uncharacterized protein LOC121419836 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB212EA) HSP 1 Score: 57.0 bits (136), Expect = 1.500e-7 Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 1
Query: 16 EVSLCVAYLLCVPPLGLFGAVHWYL---EREDRVLRLFT--LNFAVFGWILDLFLLPSLVARANQ 195
E SL AYL +PP GLFG H YL + D ++T L F FGW+ DLF +P LV RAN+
Sbjct: 150 ERSLVNAYLYAIPPWGLFGMHHMYLGTFRKNDAFSLIYTATLGFIGFGWLFDLFRIPILVRRANE 214
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: UPI001E1DBB7D (uncharacterized protein LOC123557543 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBB7D) HSP 1 Score: 56.6 bits (135), Expect = 2.040e-7 Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 16 EVSLCVAYLLCVPPLGLFGAVHWYLEREDRVLRLFTLNFAVFG--WILDLFLLPSLVARA 189
E SL AY+L +PPLG+FGA H+YL L ++T F +FG WI+DLF + LV +A
Sbjct: 130 EKSLGTAYILALPPLGIFGAYHYYLGNIKLGL-IYTFTFGIFGIGWIIDLFRMSKLVRKA 188
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: A0A6A7G919_9CRUS (Caffeoylshikimate esterase n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G919_9CRUS) HSP 1 Score: 55.8 bits (133), Expect = 3.800e-7 Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 22 SLCVAYLLCVPPLGLFGAVHWYLEREDRVLR-LFTLNFAVFGWILDLFLLPSLVARAN 192
SL +AY+L +PP GLFG ++YL R+++ LFT GWI+D F LPSL+ AN
Sbjct: 34 SLILAYILWLPPFGLFGFHNFYLNRKEQGFAFLFTGGLLGIGWIIDFFRLPSLLTTAN 91
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: A0A7M7LP26_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7LP26_STRPU) HSP 1 Score: 55.1 bits (131), Expect = 7.030e-7 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 16 EVSLCVAYLLCVPPLGLFGAVHWYLEREDRV-LRLFTLNFAVFGWILDLFLLPSLVARANQQ 198
++SL AYL+ +PP GLFG H+YL R F+ V GW+ DL +P LV +AN++
Sbjct: 166 KISLVDAYLMWLPPFGLFGTHHYYLGRTRYASFHSFSFGLNVVGWVFDLLRMPWLVRKANEE 227
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: A0A7M7ND29_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7ND29_STRPU) HSP 1 Score: 55.1 bits (131), Expect = 7.160e-7 Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 16 EVSLCVAYLLCVPPLGLFGAVHWYLE--REDRVLRLF---TLNFAVFGWILDLFLLPSLVARANQ 195
E S+ AYL +PP GLFG + YL R++ V L TL F FGW+ DLF +P LV RAN+
Sbjct: 144 ERSIVNAYLYSIPPWGLFGIHYMYLGTFRKNDVFHLIYTATLGFMGFGWLFDLFRIPILVRRANE 208
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: UPI001E1D305F (uncharacterized protein LOC123557542 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D305F) HSP 1 Score: 54.3 bits (129), Expect = 1.330e-6 Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 16 EVSLCVAYLLCVPPLGLFGAVHWYLEREDRVLRLFTLNFAVFG--WILDLFLLPSLV 180
E SL AY+L +PPLG+FGA ++YL L ++T F +FG WI+DLF +P LV
Sbjct: 130 EKSLGTAYILALPPLGIFGAYYYYLGNVSLGL-VYTFTFGMFGIGWIVDLFRMPRLV 185
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Match: A0A7M7ST02_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7ST02_STRPU) HSP 1 Score: 53.5 bits (127), Expect = 2.570e-6 Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 1
Query: 16 EVSLCVAYLLCVPPLGLFGAVHWYLEREDR-VLRLFTLNFAVFGWILDLFLLPSLVARAN 192
++SLC AY+L +PP+GL G +YL R+ + TL GW+LD LP++V +AN
Sbjct: 168 KISLCDAYMLWLPPIGLLGFYQYYLGRKRYGIFHTLTLGRCGLGWLLDFCRLPAMVRKAN 227 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122627.4658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122627.4658.1 >prot_M-pyrifera_M_contig122627.4658.1 ID=prot_M-pyrifera_M_contig122627.4658.1|Name=mRNA_M-pyrifera_M_contig122627.4658.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp VPRPPEVSLCVAYLLCVPPLGLFGAVHWYLEREDRVLRLFTLNFAVFGWIback to top mRNA from alignment at M-pyrifera_M_contig122627:92..346+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122627.4658.1 ID=mRNA_M-pyrifera_M_contig122627.4658.1|Name=mRNA_M-pyrifera_M_contig122627.4658.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=255bp|location=Sequence derived from alignment at M-pyrifera_M_contig122627:92..346+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122627:92..346+ >mRNA_M-pyrifera_M_contig122627.4658.1 ID=mRNA_M-pyrifera_M_contig122627.4658.1|Name=mRNA_M-pyrifera_M_contig122627.4658.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig122627:92..346+ (Macrocystis pyrifera P11B4 male)back to top |