mRNA_M-pyrifera_M_contig12245.4630.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: A0A6H5KSH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH0_9PHAE) HSP 1 Score: 216 bits (549), Expect = 7.020e-70 Identity = 112/140 (80.00%), Postives = 121/140 (86.43%), Query Frame = 1
Query: 31 MYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGXXXXG------RPGPLRLLLAGPYSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARAVMGKAPAIDPALPE 432
MY GF+A+MAYAEGFKGFQ+KFSPLVVKRALTLD XXXX R GPLRLLLAGPYSMGLFHATKKR TVSW LT GVLCLV +VK+LPYPWRSIVDAGVVVGLSYGTLSIC+IWARAV+G+AP+IDPALPE
Sbjct: 1 MYAGFSAIMAYAEGFKGFQQKFSPLVVKRALTLDPAAXXXXXXXXXXXXXXRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAVLGRAPSIDPALPE 140
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: D8LTY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY0_ECTSI) HSP 1 Score: 199 bits (505), Expect = 6.650e-61 Identity = 99/134 (73.88%), Postives = 108/134 (80.60%), Query Frame = 1
Query: 49 ALMAYAEGFKGFQKKFSPLVVKRALTLDSPKT------GGXXXXGRPGPLRLLLAGPYSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARAVMGKAPAIDPALPE 432
A+ ++ GFQKKFSPLVVKRALTLD GG R GPLRLLLAGPYSMGLFHATKKR TVSW LT GVLCLV +VK+LPYPWRSIVDAGVVVGLSYGTLSIC+IWARA++GKAP+IDPALPE
Sbjct: 175 AMQPFSRASLGFQKKFSPLVVKRALTLDQAAAAVPAADGGQKRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPE 308
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: A0A836CIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU2_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.910e-50 Identity = 86/142 (60.56%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 4 GDFTTAQWAMYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGXXXXGRPGPLRLLLAGPYSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARAVMGKAPAIDPALP 429
GD T A W MY GFA LMAYAEG+K FQKKFSP+VV+RALTLD GPLRL+LAGPYSMGLFHA++KR VSW L+ VL LV V+KLPYPWRSI+D GVV GLS+G+ +I W R+ G P +D LP
Sbjct: 129 GDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSA----------GPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLP 260
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: A0A835ZF77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF77_9STRA) HSP 1 Score: 168 bits (425), Expect = 7.410e-50 Identity = 81/143 (56.64%), Postives = 101/143 (70.63%), Query Frame = 1
Query: 4 GDFTTAQWAMYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGXXXXGRPGPLRLLLAGPYSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARAVMGKAPAIDPALPE 432
GD + WA+Y F ALMAY EG K FQKKFSP+VV+RALTLD +T GPLR++LAGPY MGLF+AT+KR VSW L V+ LV +V++LPYPWRSI+DAGVV GLS+G +I W R+ G+AP +D +PE
Sbjct: 80 GDLSYGHWALYMSFVALMAYVEGHKAFQKKFSPMVVQRALTLDQARTSF-------GPLRIILAGPYCMGLFYATRKRKIVSWTLYISVIALVTVVRQLPYPWRSIIDAGVVAGLSWGASAILYFWVRSWFGRAPGVDAQMPE 215
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: W7TVP9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP9_9STRA) HSP 1 Score: 158 bits (399), Expect = 3.380e-45 Identity = 85/141 (60.28%), Postives = 99/141 (70.21%), Query Frame = 1
Query: 10 FTTAQWAMYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGXXXXGRPGPLRLLLAGPYSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARAVMGKAPAIDPALPE 432
FT WA Y GFA +MAYAEG+KGFQ KFSPLVVKRALTL R L +LA PYSMGLFHA+KKR VSW + GV+ LV VK L +P+RSIVDAGVV GLS+G LSI I+A+A+ G P+IDPALP+
Sbjct: 155 FTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGP----------RSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPD 285
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: A0A7S3SW48_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW48_EMIHU) HSP 1 Score: 156 bits (395), Expect = 3.790e-45 Identity = 78/144 (54.17%), Postives = 99/144 (68.75%), Query Frame = 1
Query: 1 QGDFTTAQWAMYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGXXXXGRPGPLRLLLAGPYSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARAVMGKAPAIDPALPE 432
Q D T QW +YGG A AY EG+K FQ KFSPLVV+RA+TL + P L +LA YSMGLFHA+KKR TVSW ++ GV C++ +VK+LPYPWRS+VDAGV GL +G SI +I+ RA+ GK+P +DP LP+
Sbjct: 103 QRDITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTRSPP-------PPLLHSVLAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPK 239
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: A0A0M0JX49_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX49_9EUKA) HSP 1 Score: 149 bits (375), Expect = 2.190e-42 Identity = 75/144 (52.08%), Postives = 94/144 (65.28%), Query Frame = 1
Query: 1 QGDFTTAQWAMYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGXXXXGRPGPLRLLLAGPYSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARAVMGKAPAIDPALPE 432
Q D + QW YGG + AY EG+ FQKKFSPLVV+RA+TL + P+ + LA YSMGL HATKKR VSW ++ V +V IVK+LPYPWRSIVDAGV GL++G +SI +I+ARA+ G P +DP LP
Sbjct: 86 QRDLSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTLKQSTS----------PVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLPS 219
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: A0A7S0EQ72_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EQ72_9EUKA) HSP 1 Score: 147 bits (370), Expect = 1.840e-41 Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 1
Query: 1 QGDFTTAQWAMYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGXXXXGRPGPLRLLLAGP-YSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARAVMGKAPAIDPALPE 432
Q D T QW+++G A AY EG+K FQ KFSP++V+RA+TL T PL + P YSMGLFHATKKR ++W +++GV +V +VK+LPYPWRSIVDAGVV GL +G SI ++ RA++G +P +DP LPE
Sbjct: 99 QRDLTLLQWSLFGSTMAAFAYFEGYKAFQLKFSPMLVQRAMTLSREGT----------PLHHIALAPFYSMGLFHATKKRRIIAWTISSGVALMVGLVKRLPYPWRSIVDAGVVTGLLWGAASIINLYVRALLGSSPGVDPCLPE 233
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: A0A7S4NCU3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCU3_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.390e-39 Identity = 79/141 (56.03%), Postives = 95/141 (67.38%), Query Frame = 1
Query: 13 TTAQWAMYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGXXXXGRPGPLRLLLAGPYSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARA-VMGKAPAIDPALPE 432
T+ Q A+Y A AY EG+KGFQ KFSPLV R+ TL G + +LLA YSMGLFHAT+KR+ VSW +T GV +V VK+LPYPWR+IVDAGVVVGL++GTLSI L + +A V GK P DPALPE
Sbjct: 73 TSVQLAIYAATCAWFAYVEGYKGFQLKFSPLVASRSRTL---------VPGTSSFVHILLAPLYSMGLFHATRKRMIVSWSVTLGVAGIVAAVKRLPYPWRNIVDAGVVVGLTWGTLSIMLSYVKAMVTGKNPC-DPALPE 203
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Match: A0A7S3MHY7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHY7_9STRA) HSP 1 Score: 141 bits (356), Expect = 6.720e-39 Identity = 77/149 (51.68%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 1 QGDFTTAQWAMYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGXXXXGRPGPLRLLLAGPYSMGLFHATKKRLTVSWGLTTGVLCLVHIVKKLPYPWRSIVDAGVVVGLSYGTLSICLIWARAVMG---KAPAIDPALPEGA 438
Q D QWA+Y G+ A MAYAEG+K FQ KFSP+VV+RA + P +LLAGPY MGLF A+KKR+ V W +T GV L VKKLPYP+R+IVDAGVVVGLSYGTLSI ++ +A G +AP + E A
Sbjct: 132 QKDMLPYQWALYAGWCAYMAYAEGYKAFQLKFSPMVVQRAFLIHQ----------NPNIFNVLLAGPYCMGLFGASKKRMIVGWAVTAGVFSLTLFVKKLPYPYRAIVDAGVVVGLSYGTLSILVLAVKAFFGGKVEAPGDEEVTSEPA 270 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12245.4630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12245.4630.1 >prot_M-pyrifera_M_contig12245.4630.1 ID=prot_M-pyrifera_M_contig12245.4630.1|Name=mRNA_M-pyrifera_M_contig12245.4630.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp MYGGFAALMAYAEGFKGFQKKFSPLVVKRALTLDSPKTGGGGGGGRPGPLback to top mRNA from alignment at M-pyrifera_M_contig12245:4521..4961- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12245.4630.1 ID=mRNA_M-pyrifera_M_contig12245.4630.1|Name=mRNA_M-pyrifera_M_contig12245.4630.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=441bp|location=Sequence derived from alignment at M-pyrifera_M_contig12245:4521..4961- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12245:4521..4961- >mRNA_M-pyrifera_M_contig12245.4630.1 ID=mRNA_M-pyrifera_M_contig12245.4630.1|Name=mRNA_M-pyrifera_M_contig12245.4630.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig12245:4521..4961- (Macrocystis pyrifera P11B4 male)back to top |