mRNA_M-pyrifera_M_contig122199.4575.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: A0A109FF30_9BASI (SET domain-containing protein (Fragment) n=1 Tax=Rhodotorula sp. JG-1b TaxID=1305733 RepID=A0A109FF30_9BASI) HSP 1 Score: 63.5 bits (153), Expect = 2.230e-10 Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 1 HNTPLLTPGVDLLNHAPGAVTRWSVTDEHG--GAFHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIP 204
++TP+L PG+DLLNH P A WS TD HG G+ +V + ++ GS++FN Y SN LL +GF +P
Sbjct: 172 NSTPVLFPGIDLLNHRPTAKVTWS-TDVHGVPGSLTIVLDEAVSAGSQIFNTYGAKSNEELLLGYGFVLP 240
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: A0A7S4UBX5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UBX5_9DINO) HSP 1 Score: 57.4 bits (137), Expect = 6.160e-8 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 7 TPLLTPGVDLLNHAPGAVTRWSVTDEHGGA---FHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIPAN 210
TP + P DL NH PGA R +V +H A L+ ++APGSELF Y +LSNA LL GF++ +N
Sbjct: 196 TPCMAPFADLFNHDPGADRR-AVFPQHDAATGDLRLLCRSDVAPGSELFISYGELSNADLLFNSGFALESN 265
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: A0A194S6H0_RHOGW (SET domain-containing protein n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A194S6H0_RHOGW) HSP 1 Score: 56.6 bits (135), Expect = 1.160e-7 Identity = 29/81 (35.80%), Postives = 45/81 (55.56%), Query Frame = 1
Query: 1 HNTPLLTPGVDLLNHAPGAVTRWSVTDEHG-----------GAFHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIPAN 210
++TP+L PG+D+LNH P A WS +D H G+ +V +++ G ++FN Y SN LL +GF +P+N
Sbjct: 393 NSTPVLFPGIDMLNHRPTAKVTWS-SDVHAEVASSDGEGDKGSLTIVLDEDVPAGEQVFNTYGAKSNEELLLGYGFVLPSN 472
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: A0A0K3CHE7_RHOTO (BY PROTMAP: gi|342321631|gb|EGU13564.1| putative Cytoplasm protein [Rhodotorula glutinis ATCC 204091] n=3 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CHE7_RHOTO) HSP 1 Score: 54.3 bits (129), Expect = 7.700e-7 Identity = 28/80 (35.00%), Postives = 43/80 (53.75%), Query Frame = 1
Query: 1 HNTPLLTPGVDLLNHAPGAVTRWSVTDE----------HGGAFHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIPAN 210
++TP+L PGVDLLNH P A W E G+ +V +E+ G++++N Y +N LL +GF +P+N
Sbjct: 839 NSTPVLFPGVDLLNHRPEARVTWFSDTETEIKRVDGRVEKGSLTIVLDEEIPAGAQVYNTYGAKANEELLLGYGFVLPSN 918
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: A0A511K8F2_RHOTO (Lysine methyltransferase n=1 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A511K8F2_RHOTO) HSP 1 Score: 53.9 bits (128), Expect = 1.010e-6 Identity = 28/81 (34.57%), Postives = 44/81 (54.32%), Query Frame = 1
Query: 1 HNTPLLTPGVDLLNHAPGAVTRWSVTDEHG-----------GAFHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIPAN 210
++TP+L PGVDLLNH P A W + G G+ +V +E+ G++++N Y +N LL +GF +P+N
Sbjct: 116 NSTPVLFPGVDLLNHRPDARVTWFRDLDAGIERADGVAAEKGSLTIVLDEEIPAGAQVYNTYGAKANEELLLGYGFVLPSN 196
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: A0A8H3I5V8_9LECA (Uncharacterized protein n=1 Tax=Heterodermia speciosa TaxID=116794 RepID=A0A8H3I5V8_9LECA) HSP 1 Score: 53.9 bits (128), Expect = 1.040e-6 Identity = 28/68 (41.18%), Postives = 37/68 (54.41%), Query Frame = 1
Query: 7 TPLLTPGVDLLNHAPGAVTRWSVTDEHGGAFHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIPAN 210
+P+L PGVDLLNH P A W T + LV + L G+ + N Y Q SN L+ +GFS+ N
Sbjct: 221 SPVLIPGVDLLNHRPSAKVTWQWTSVN---CRLVINENLGAGTPICNNYGQKSNEELILGYGFSLADN 285
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: M7WYB3_RHOT1 (Lysine methyltransferase n=2 Tax=Rhodosporidium toruloides TaxID=5286 RepID=M7WYB3_RHOT1) HSP 1 Score: 53.1 bits (126), Expect = 1.920e-6 Identity = 28/81 (34.57%), Postives = 44/81 (54.32%), Query Frame = 1
Query: 1 HNTPLLTPGVDLLNHAPGAVTRW----SVTDEHG-------GAFHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIPAN 210
++TP+L PGVDLLNH P A W +E G+ +V +E+ G++++N Y +N LL +GF +P+N
Sbjct: 205 NSTPVLFPGVDLLNHRPDARVTWFSDMDTENERADGRAVGKGSLTIVLDEEIPAGAQVYNTYGAKANEELLLGYGFVLPSN 285
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: A0A5C5G6C5_9BASI (SET domain-containing protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G6C5_9BASI) HSP 1 Score: 52.8 bits (125), Expect = 2.630e-6 Identity = 29/82 (35.37%), Postives = 43/82 (52.44%), Query Frame = 1
Query: 1 HNTPLLTPGVDLLNHAPGAVTRWSV---------TDEHGG---AFHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIPAN 210
++TP+L PG+D+LNH P A WS TD GG + +V +++ G ++FN Y SN LL +GF + N
Sbjct: 207 NSTPVLFPGIDMLNHRPTAKVTWSSDVRSVAPSGTDGDGGDKGSLTIVLDEDVGAGEQVFNTYGAKSNEELLLGYGFVLSPN 288
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: A0A2S5BJB8_9BASI (SET domain-containing protein n=1 Tax=Rhodotorula taiwanensis TaxID=741276 RepID=A0A2S5BJB8_9BASI) HSP 1 Score: 52.0 bits (123), Expect = 4.920e-6 Identity = 29/85 (34.12%), Postives = 42/85 (49.41%), Query Frame = 1
Query: 1 HNTPLLTPGVDLLNHAPGAVTRWS---------------VTDEHGGAFHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIPAN 210
++TP+L PGVDLLNH P A WS V E G +V + ++ +++FN Y SN LL +GF +P +
Sbjct: 215 NSTPVLFPGVDLLNHRPTAKVTWSTDKPMSLEAAAAARAVRVEDVGGLSIVVDERVSADTQVFNTYGAKSNEELLLGYGFVLPGS 299
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Match: A0A1Y2FXT9_9BASI (SET domain-containing protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2FXT9_9BASI) HSP 1 Score: 48.9 bits (115), Expect = 6.000e-5 Identity = 28/76 (36.84%), Postives = 39/76 (51.32%), Query Frame = 1
Query: 4 NTPLLTPGVDLLNHAPGAVTRWSVTD-------EHGGAFHLVAGKELAPGSELFNEYAQLSNAVLLARHGFSIPAN 210
+TP+L PGVD+LNH GA W +TD E G +V + + + FN Y N LL +GF+ P+N
Sbjct: 198 STPVLFPGVDMLNHRLGAKASW-ITDVNEPAVREPKGKLAIVLDEGVEKDQQAFNTYGPKPNEELLLGYGFTTPSN 272 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122199.4575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122199.4575.1 >prot_M-pyrifera_M_contig122199.4575.1 ID=prot_M-pyrifera_M_contig122199.4575.1|Name=mRNA_M-pyrifera_M_contig122199.4575.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp HNTPLLTPGVDLLNHAPGAVTRWSVTDEHGGAFHLVAGKELAPGSELFNEback to top mRNA from alignment at M-pyrifera_M_contig122199:1..210- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122199.4575.1 ID=mRNA_M-pyrifera_M_contig122199.4575.1|Name=mRNA_M-pyrifera_M_contig122199.4575.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=210bp|location=Sequence derived from alignment at M-pyrifera_M_contig122199:1..210- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122199:1..210- >mRNA_M-pyrifera_M_contig122199.4575.1 ID=mRNA_M-pyrifera_M_contig122199.4575.1|Name=mRNA_M-pyrifera_M_contig122199.4575.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig122199:1..210- (Macrocystis pyrifera P11B4 male)back to top |