mRNA_M-pyrifera_M_contig122135.4554.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: A0A506PFD6_9FLAO (HYR domain-containing protein (Fragment) n=1 Tax=Paucihalobacter ruber TaxID=2567861 RepID=A0A506PFD6_9FLAO) HSP 1 Score: 67.4 bits (163), Expect = 8.170e-11 Identity = 47/132 (35.61%), Postives = 62/132 (46.97%), Query Frame = 1
Query: 1 TQQIFITDMEGPVLTAAPA-LDVELDCFMADTSATTNGEPTFDDVCNGAIRSAPFDNPSTPCPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTAPA--------DFVGNCNSVASIGTPTGTDDC 369
TQ I + D P L PA + VE D A + T D C+ + + +T G IVR W DN GN + TQTIT DNTPP++T PA D GNC ++ +G PT +D+C
Sbjct: 73 TQTISVVDSTAPELVGVPADITVECDAIPALPNVTAT------DNCDTTLSVNYTETSNTVTDGVGTIVRQWSITDNGGNT-TTETQTITVVDNTPPIITCPANITAQTSNDGAGNCTTIVDLGNPTVSDNC 197
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: A0A7Y3FRW3_9FLAO (T9SS type A sorting domain-containing protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y3FRW3_9FLAO) HSP 1 Score: 67.8 bits (164), Expect = 1.120e-10 Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 1
Query: 1 TQQIFITDMEGPVLTAAPALDVELDCFMADTSATTNGEPTFDDVCNGAIRSAPFDNPSTP--CPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTAPADFVGNCN-----SVASIGTPTGTDDC 369
+Q I + D PV A PA D+ L C +D A + T D C+G I +P N +TP C ++VRTW D+CGN S +QTIT D+TPP++T PAD S A+ G+ T TD+C
Sbjct: 60 SQTITVNDDTAPVPPAPPA-DLNLQCA-SDVPAAV--DLTATDNCDGDITVSPTAN-TTPGACANDFVMVRTWTFTDDCGNTS-SVSQTITVNDDTPPVITCPADLTLEAGPNLDISPANTGSATATDNC 183
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: UPI00115DE7FC (gliding motility-associated C-terminal domain-containing protein n=1 Tax=Changchengzhania lutea TaxID=2049305 RepID=UPI00115DE7FC) HSP 1 Score: 65.1 bits (157), Expect = 1.020e-9 Identity = 47/131 (35.88%), Postives = 62/131 (47.33%), Query Frame = 1
Query: 1 TQQIFITDMEGPVLT-AAPALDVELDCFMADTSATTNG-EPTFDDVC---NGAIRSAPFDNPSTPCPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTAPADFVGNCN---SVASIGTPTGTDDC 369
T I D P+++ A LD L+C AD A PT D C N + + N T CP + R W+ D CGN ++FTQTIT D TPP V P++ C+ S + GT T TD+C
Sbjct: 1254 TATYLIKDGTAPIISNTAGDLDTTLECSDADGIAAALALSPTASDDCSTPNLVLINNETAN-DTECPNAYVQTRIWNFVDACGNLSDTFTQTITVVDTTPPTVVFPSNVTAECSDDLSPIAFGTATATDNC 1383
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: A0A2V2S6A0_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V2S6A0_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 2.620e-9 Identity = 42/128 (32.81%), Postives = 59/128 (46.09%), Query Frame = 1
Query: 4 QQIFITDMEGPVLTAAPALDVELDCFMADTSATTNGEPTFDDVCNGAIRSAPFDNPSTPCPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTAPADFVGNC---NSVASIGTPTGTDDCSSV 378
Q I + D P L+ P + L C A+ + G T D C+ + D+ + PCPG+++I RTW + D CGN Q IT D PP +T P + C S G T +D CS+V
Sbjct: 769 QTITLRDTTPPSLSLPP--NKVLQC-PANVTTNNTGTATAQDACSAPVAIRFSDSVTNPCPGSSVITRTWTATDACGNSTNGI-QMITVQDTNPPTITPPQNVTLECPADTSTNHTGMATASDTCSAV 892
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: V6SHP1_9FLAO (Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 TaxID=1341181 RepID=V6SHP1_9FLAO) HSP 1 Score: 62.4 bits (150), Expect = 8.810e-9 Identity = 42/128 (32.81%), Postives = 60/128 (46.88%), Query Frame = 1
Query: 1 TQQIFITDMEGPVLTAAPALDVELDCFMADTSATTNGEPTFDDVCNGAIRSAPFDNPSTPCPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTA--PADFVGNCNSVASIGTPTGTDDCSSV 378
TQ I + D PV ++ L+C + T T D CN A + + + CPG + I+RTW +AD CGN+ QTI+ D TPP+ T P + C ++ + T T TD C V
Sbjct: 1070 TQTIRVNDTTAPVFNETLPTNLTLECNAGIPNPVTL---TATDNCNSATVTFEEETTNGTCPGNSEIIRTWRTADACGNENTHI-QTISILDTTPPVFTGNLPPNQTLECGNIPTAPTLTATDSCGEV 1193
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: A0A7V1ZTR8_9BACT (HYR domain-containing protein n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A7V1ZTR8_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 5.660e-8 Identity = 41/112 (36.61%), Postives = 55/112 (49.11%), Query Frame = 1
Query: 61 DVELDCFMADTSATTNGEPTFDDVCNGAIRSAPFD----NPSTP--CPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTAPADFVGNCNSVASIGTPTGTDDCSSV 378
DV++DC + T + G P + C PFD + TP CP I R W D G +S Q I+ +D TPP++T PAD V C++V G+ T TDDC V
Sbjct: 431 DVQIDCTES-TDPSNTGNPVVEGNC------PPFDVTYEDTQTPGSCPQEYTITRLWIVVDASGM-SDSCEQIISVSDETPPVITCPADLVFECDAVGDFGSATATDDCGQV 534
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: UPI00142F4887 (hypothetical protein n=1 Tax=Tenacibaculum mesophilum TaxID=104268 RepID=UPI00142F4887) HSP 1 Score: 58.5 bits (140), Expect = 1.950e-7 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 1
Query: 43 TAAPALDVELDCFMADTSATTNGEP-TFDDVCNGAIRSAP--FDNPSTPCPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTA-PADFVGNCNSVASIGTPTGTDDCSSV 378
T +LD + C D++A + T + C+ I P F+ +T CP W D+CG FTQTIT TD T P+++A PAD +C ++ S+ T T TD+C SV
Sbjct: 530 TTVDSLDRTVSC--EDSAALATAQLLTPEASCDLTITKIPGSFEASTTNCPVIGTYTNIWTFTDSCGRTSGQFTQTITVTDTTAPVLSATPADVSVDCEAIPSVPTITATDNCDSV 643
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: UPI00064AF2E3 (hypothetical protein n=1 Tax=Tenacibaculum mesophilum TaxID=104268 RepID=UPI00064AF2E3) HSP 1 Score: 58.5 bits (140), Expect = 2.000e-7 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 1
Query: 43 TAAPALDVELDCFMADTSATTNGEP-TFDDVCNGAIRSAP--FDNPSTPCPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTA-PADFVGNCNSVASIGTPTGTDDCSSV 378
T +LD + C D++A + T + C+ I P F+ +T CP W D+CG FTQTIT TD T P+++A PAD +C ++ S+ T T TD+C SV
Sbjct: 530 TTVDSLDRTVSC--EDSTALATAQLLTPEASCDLTITKIPGSFEASTTNCPVIGTYTNIWTFTDSCGRTSGQFTQTITVTDTTAPVLSATPADVSVDCEAIPSVPTITATDNCDSV 643
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: UPI001422ABEA (hypothetical protein n=1 Tax=Paraflavitalea devenefica TaxID=2716334 RepID=UPI001422ABEA) HSP 1 Score: 57.8 bits (138), Expect = 3.740e-7 Identity = 46/126 (36.51%), Postives = 60/126 (47.62%), Query Frame = 1
Query: 1 TQQIFITDMEGPVLTAAPALDVELDCFMADTSATTNGEPTFDDVCNGAIRSAPFDNPSTPCPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTA-PADFVGNCNSVASIGTPTGTDDCSS 375
TQ + + D PVL + PA DV + C +AT T D C+ + F ST G I RTW + + TQT+T TDNTPP++T PAD C SV T T +D+C S
Sbjct: 2466 TQTLTVQDNIPPVLISVPA-DVTVQCGNVPAAATV----TATDNCDPTV-PVTFAETSTVVDGCGTITRTW-ATTXXXXXXXTATQTLTVTDNTPPVLTGVPADATVQCGSVPVAATVTASDNCDS 2584
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Match: A0A1M5FSU8_9FLAO (Gliding motility-associated C-terminal domain-containing protein n=2 Tax=Tenacibaculum TaxID=104267 RepID=A0A1M5FSU8_9FLAO) HSP 1 Score: 57.0 bits (136), Expect = 6.900e-7 Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 1
Query: 43 TAAPALDVELDCFMADTSATTNGEP-TFDDVCNGAIRSAP--FDNPSTPCPGTTIIVRTWDSADNCGNDGESFTQTITTTDNTPPMVTA-PADFVGNCNSVASIGTPTGTDDCSSV 378
T +LD + C D++A + T + C+ I P F+ +T CP W D+CG FTQTIT TD + P+++A PAD +C ++ S+ T T TD+C SV
Sbjct: 530 TTVDSLDRTVSC--EDSAALATAQLLTPEASCDLTITKIPGSFEASTTNCPVIGTYTNIWTFTDSCGRTSGQFTQTITVTDTSAPVLSATPADVSVDCEAIPSVPTITATDNCDSV 643 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122135.4554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122135.4554.1 >prot_M-pyrifera_M_contig122135.4554.1 ID=prot_M-pyrifera_M_contig122135.4554.1|Name=mRNA_M-pyrifera_M_contig122135.4554.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp MEGPVLTAAPALDVELDCFMADTSATTNGEPTFDDVCNGAIRSAPFDNPSback to top mRNA from alignment at M-pyrifera_M_contig122135:8..385- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122135.4554.1 ID=mRNA_M-pyrifera_M_contig122135.4554.1|Name=mRNA_M-pyrifera_M_contig122135.4554.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=378bp|location=Sequence derived from alignment at M-pyrifera_M_contig122135:8..385- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122135:8..385- >mRNA_M-pyrifera_M_contig122135.4554.1 ID=mRNA_M-pyrifera_M_contig122135.4554.1|Name=mRNA_M-pyrifera_M_contig122135.4554.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig122135:8..385- (Macrocystis pyrifera P11B4 male)back to top |