mRNA_M-pyrifera_M_contig121972.4516.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Match: A0A6U1XB29_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A6U1XB29_9EUKA) HSP 1 Score: 103 bits (256), Expect = 3.080e-25 Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 4 GFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGG-YNPYVASDISRGHEAGICCLDVYVFPDTDQDASSSMTTLINNLLDDGALTNNMVWMDI 288
GFDLSY+QG VS S F CL +GY FGII+AT G+ NPY++S +S + I +DVY+FPDT ASS M + I +L DG LTNNM+WMDI
Sbjct: 22 GFDLSYYQGDVSSSDFSCLKSNGYDFGIIEATKGSQATLNPYISSVVSNARKH-IKNIDVYIFPDTSHSASSLMNSFIKDLKKDGVLTNNMIWMDI 116
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Match: D2VXK4_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VXK4_NAEGR) HSP 1 Score: 97.8 bits (242), Expect = 2.160e-23 Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 1 LGFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGGYNPYVASDISRGHEAGICCLDVYVFPDTDQDASSSMTTLINNLLDDGALTNNMVWMDI 288
LG DLSYFQG VSQSS++CL SG F IIQA TG NPYVA+DI+R AGI +D+Y+FP+ ++DA++ + +N + +GA T +W+DI
Sbjct: 26 LGLDLSYFQGDVSQSSWNCLKQSGREFAIIQAQLSTGRVNPYVANDINRAKAAGIKYVDIYIFPNINEDAAAQVQNTVNFIKSNGA-TFGQIWLDI 120
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Match: A0A146K4U1_9EUKA (Glycosyl hydrolase family 25 protein (Fragment) n=1 Tax=Trepomonas sp. PC1 TaxID=1076344 RepID=A0A146K4U1_9EUKA) HSP 1 Score: 89.4 bits (220), Expect = 5.180e-20 Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 1
Query: 4 GFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGGYNPYVASDISRGHEAGICCLDVYVFPDTDQDASSSMTTLINNLLDDGALTNNMVWMDI 288
GFDLS FQG V QSSF+CLA +G F I QA G NPY +D R AGI +D Y+FP + A S + +N L +G LTNNM+W+DI
Sbjct: 10 GFDLSVFQGDVQQSSFNCLAQNGMKFAIFQAQRGPK-LNPYAINDYKRAKIAGIQYVDFYMFPTVQKSAISQVKETVNYLKSNGVLTNNMIWVDI 103
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Match: A0A146KB08_9EUKA (Glycosyl hydrolase family 25 protein (Fragment) n=1 Tax=Trepomonas sp. PC1 TaxID=1076344 RepID=A0A146KB08_9EUKA) HSP 1 Score: 86.7 bits (213), Expect = 4.430e-19 Identity = 46/100 (46.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 4 GFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGGYNPYVASDISRGHEAGICCLDVYVFPDTDQDASSSMTTLINNLLDDGALTNNMVWMDIGSRSL 303
GFDLSY+QG VSQ+S CL +G +F I QA G +PY +D R AGI +D YVFP +D IN+L G L NNM+W+DI S L
Sbjct: 6 GFDLSYYQGDVSQTSMSCLKQNGMNFAIFQAQIGKT-ISPYAINDYKRAKAAGIANVDFYVFPTISKDPRQQARDTINHLKAGGVLQNNMIWLDIESHDL 104
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Match: A0A146K1V3_9EUKA (Glycosyl hydrolase family 25 protein n=1 Tax=Trepomonas sp. PC1 TaxID=1076344 RepID=A0A146K1V3_9EUKA) HSP 1 Score: 86.7 bits (213), Expect = 5.960e-19 Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 4 GFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGGYNPYVASDISRGHEAGICCLDVYVFPDTDQDASSSMTTLINNLLDDGALTNNMVWMDIGSRSL 303
GFDLSY+QG VSQ++ +CL +SG F I QA G +PY A+D +R AGI +D Y+FP +D IN+L G L NMVW+DI + L
Sbjct: 11 GFDLSYYQGDVSQNTMNCLKNSGMKFAIFQAQIGKT-ISPYAANDYNRAKAAGIANVDFYIFPTISKDPRQQARDTINHLKSKGVLKGNMVWLDIENHGL 109
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Match: UPI001CFD7B67 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD7B67) HSP 1 Score: 84.0 bits (206), Expect = 5.800e-18 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 1 LGFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGGYNPYVASDISRGHEAGICCLDVYVFPDTDQDASSSMTTLINNLLDDGALTNNMVWMDI 288
LG DLSYFQG V QSS++CL +G F IIQA +G NPY+ +DI+R AGI +D+Y+FP+ + D + + ++ + +G T +W+D+
Sbjct: 31 LGLDLSYFQGDVPQSSWNCLKQNGREFAIIQAQTQSGHVNPYIVNDINRAKAAGIKYVDIYIFPNVNMDPAEQVRNTVSFIKQNGG-TFGQIWIDV 125
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Match: A0A6A5BRH2_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BRH2_NAEFO) HSP 1 Score: 84.0 bits (206), Expect = 1.110e-17 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 1 LGFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGGYNPYVASDISRGHEAGICCLDVYVFPDTDQDASSSMTTLINNLLDDGALTNNMVWMDI 288
LG DLSYFQG V QSS++CL +G F IIQA +G NPY+ +DI+R AGI +D+Y+FP+ + D + + +N + +G + +W+D+
Sbjct: 16 LGLDLSYFQGDVPQSSWNCLKQNGREFAIIQAQTQSGHVNPYIVNDINRAKAAGIQYVDIYIFPNVNMDPAEQVRNTVNFVKQNGG-SFGQIWIDV 110
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Match: A0A146KHB9_9EUKA (Lysozyme family protein (Fragment) n=1 Tax=Trepomonas sp. PC1 TaxID=1076344 RepID=A0A146KHB9_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 7.440e-14 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 4 GFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGGYNPYVASDISRGHEA---GICCLDVYVFPDTDQDASSSMTTLINNLLDDGALTNNMVWMDIGSRSL 303
G+D+SY++G SQSSFDCL +G F I++A G+ +V + I + H A GI +D Y+FP +D + I L G L NNMVW+DI + +L
Sbjct: 26 GYDISYYEGLPSQSSFDCLYKNGMRFAIMEAQMGS----TWVQNSIEQYHRAIKSGIKNVDFYIFPTKQKDPKQQVQDTIKKLQKAGVLNNNMVWLDIENHNL 124
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Match: A0A146K5G2_9EUKA (Glycosyl hydrolase family 25 protein n=1 Tax=Trepomonas sp. PC1 TaxID=1076344 RepID=A0A146K5G2_9EUKA) HSP 1 Score: 69.3 bits (168), Expect = 2.360e-12 Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 1
Query: 1 LGFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGGYNPYVASDISRGHEAGICCLDVYVFPDTDQDASSSMTTLINNLLDDGALTNNMVWMDIGSR 297
+G+DLSYF+G V QSSFDCL +G F + + N + A+D R AG +D Y +P QD + IN L ++ A+ M W+DI R
Sbjct: 1 MGYDLSYFEGDVQQSSFDCLRKNGMEFAVFEVYVHNF-LNQFAANDYKRAKAAGFKRIDFYHYPSNKQDPRQQVRDSINYLKENDAMDFGMFWIDIEER 98 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121972.4516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121972.4516.1 >prot_M-pyrifera_M_contig121972.4516.1 ID=prot_M-pyrifera_M_contig121972.4516.1|Name=mRNA_M-pyrifera_M_contig121972.4516.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp LGFDLSYFQGQVSQSSFDCLADSGYSFGIIQATAGTGGYNPYVASDISRGback to top mRNA from alignment at M-pyrifera_M_contig121972:176..478+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121972.4516.1 ID=mRNA_M-pyrifera_M_contig121972.4516.1|Name=mRNA_M-pyrifera_M_contig121972.4516.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=303bp|location=Sequence derived from alignment at M-pyrifera_M_contig121972:176..478+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121972:176..478+ >mRNA_M-pyrifera_M_contig121972.4516.1 ID=mRNA_M-pyrifera_M_contig121972.4516.1|Name=mRNA_M-pyrifera_M_contig121972.4516.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig121972:176..478+ (Macrocystis pyrifera P11B4 male)back to top |