mRNA_M-pyrifera_M_contig121829.4489.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: A0A2E7KLP1_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KLP1_9PLAN) HSP 1 Score: 231 bits (589), Expect = 3.800e-71 Identity = 163/176 (92.61%), Postives = 163/176 (92.61%), Query Frame = 1
Query: 1 GSRNRSGSSASNRSRSSVQDFGSRRGSNISGLSSGGSRHGRTDQYYRGATGYRPGGIQSGFGSQHRHSNPGXXXXXHHHAGRGGTXXXXXXXXXXXXXXXXYASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGLASWCGYNNLTPV 528
GSRNRSGSSASNRSRSSVQDFGSRRGSNISGLSSGGSRHGRTDQYYRGATGY GGIQSGFGSQHRHSNP XXXXX XXXXXXXXXXXXXXXXYASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGL SWCGYNNLTPV
Sbjct: 10 GSRNRSGSSASNRSRSSVQDFGSRRGSNISGLSSGGSRHGRTDQYYRGATGYSRGGIQSGFGSQHRHSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGLVSWCGYNNLTPV 185
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: A0A6I6AI29_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AI29_9PLAN) HSP 1 Score: 222 bits (565), Expect = 5.220e-66 Identity = 162/178 (91.01%), Postives = 162/178 (91.01%), Query Frame = 1
Query: 1 GSRNRSGSSASNRSRS--SVQDFGSRRGSNISGLSSGGSRHGRTDQYYRGATGYRPGGIQSGFGSQHRHSNPGXXXXXHHHAGRGGTXXXXXXXXXXXXXXXXYASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGLASWCGYNNLTPV 528
GSR RSGSS NRSRS SVQDFGSRRGSNISGLSSGGSRHGRTDQYYRGATGY GGIQSGFGSQHRHSNP XXXXX AGR XXXXXXXXXXXXXXXXYASRSY YNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGL SWCGYNNLTPV
Sbjct: 177 GSRIRSGSSDFNRSRSRSSVQDFGSRRGSNISGLSSGGSRHGRTDQYYRGATGYSRGGIQSGFGSQHRHSNPXXXXXXXXXAGRXXXXXXXXXXXXXXXXXXXYASRSYRYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGLVSWCGYNNLTPV 354
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: A0A518A9Z5_9PLAN (Uncharacterized protein n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A9Z5_9PLAN) HSP 1 Score: 105 bits (263), Expect = 2.700e-23 Identity = 95/158 (60.13%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 55 QDFGSRRGSNISGLSSGGSRHGRTDQYYRGATGYRPGGIQSGFGSQHRHSNPGXXXXXHHHAGRGGTXXXXXXXXXXXXXXXXYASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGLASWCGYNNLTPV 528
Q+FGSR+GS I+G SGGS+HG T Q++R +H NP XXXX HHAG XXXXXXXXXXX YA RSYHYNPGYWS XXXXXXXXXXXXXXXXX Y R PYYHY W+WATYGGLASW GYN+LTPV
Sbjct: 196 QNFGSRQGSGITGFRSGGSQHGITSQHFRXXXXXXXXXXXXXXXXXXQHRNPXXXXXGQHHAGXXXXXXXXXXXXXXXNNYQRYAGRSYHYNPGYWSXXXXXXXXXXXXXXXXXXGYYGRXXXXXPYYHYXXXXXXXWVWATYGGLASWIGYNSLTPV 353
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: A0A517RJA4_9PLAN (Uncharacterized protein n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RJA4_9PLAN) HSP 1 Score: 87.0 bits (214), Expect = 7.300e-17 Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 307 ASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGLASWCGYNNLTPV 528
A+RSY+Y PGYW+G SRYR GYGYYPYYHYRR RPW+W T+GGL++W GYN+L PV
Sbjct: 91 ANRSYYYRPGYWTGYRPWYGLGLSYGYG---SRYR-GYGYYPYYHYRRXXXRPWVWTTFGGLSAWIGYNSLAPV 160
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: A0A517XF32_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris TaxID=122 RepID=A0A517XF32_9PLAN) HSP 1 Score: 83.2 bits (204), Expect = 2.060e-15 Identity = 62/158 (39.24%), Postives = 77/158 (48.73%), Query Frame = 1
Query: 88 SGLSSGGSRHGRTDQYYRGATGYRPGGIQSGFGSQH-RHSNPGXXXXXHHHAGRGGTXXXXXXXXXXXXXXXXYASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGY----------YPYYHYRRYGYRPWIWATYGGLASWCGYNNLTPV 528
SG SS + G D++ G+ G RPGG + G H H XXXXXH ++G + + YHY PGYWSG SRY G G YPYYHYRRYGYRPW+W+T+GGL++W GYN+L PV
Sbjct: 109 SGFSSSRNHQGSGDRH-SGSPGLRPGGGRHGNRDHHVSHXXXXXXXXXHRNSGN----------------HARHGNNRYHYRPGYWSGYR---------------SRYALGNGXXXXXXXXXXXYPYYHYRRYGYRPWVWSTFGGLSAWIGYNSLNPV 234
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: A0A518IG40_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IG40_9PLAN) HSP 1 Score: 69.7 bits (169), Expect = 6.880e-11 Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 304 YASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGLASWCGYNNLTPV 528
Y ++ Y Y PGYW G +R GY Y PY HY RYGYRPW WAT+GG+A+W GY+ TPV
Sbjct: 25 YGNKPY-YPPGYWHG-------------------HRPGYRYNPYQHYHRYGYRPWAWATFGGVAAWIGYSAATPV 79
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: A0A518IG42_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IG42_9PLAN) HSP 1 Score: 67.8 bits (164), Expect = 4.170e-10 Identity = 37/89 (41.57%), Postives = 43/89 (48.31%), Query Frame = 1
Query: 310 SRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYY----------------HYRRYGYRPWIWATYGGLASWCGYNNLTPV 528
+R YHY PGYW+G R R GYG+ +Y RRY YRPW+WAT+GGL SW GYNNL PV
Sbjct: 72 NRPYHYRPGYWTGY-----------------RPRYGYGFSSFYGPRYGRXXXXXXXXXXXXRRYAYRPWVWATFGGLTSWIGYNNLNPV 143
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: A6CAT8_9PLAN (Probable mu-protocadherin-putative cell-suface protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6CAT8_9PLAN) HSP 1 Score: 62.4 bits (150), Expect = 2.580e-8 Identity = 22/30 (73.33%), Postives = 28/30 (93.33%), Query Frame = 1
Query: 439 HYRRYGYRPWIWATYGGLASWCGYNNLTPV 528
HYRRYGYRPW+W+T+GGL++W GYN+L PV
Sbjct: 18 HYRRYGYRPWVWSTFGGLSAWIGYNSLNPV 47
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: UPI0011A53B2E (hypothetical protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=UPI0011A53B2E) HSP 1 Score: 53.1 bits (126), Expect = 4.380e-5 Identity = 38/73 (52.05%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 304 YASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGLASWCGYNNLT 522
Y +R Y Y PGYW G XXXXXXXXXX HY RYGYRPW WAT+GG+A+W GY+ +T
Sbjct: 38 YGNRPY-YPPGYWHGYXXXXXXXXXX-------------------HYYRYGYRPWAWATFGGVAAWIGYSAVT 90
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Match: A0A517WY40_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WY40_9PLAN) HSP 1 Score: 53.1 bits (126), Expect = 5.120e-5 Identity = 38/73 (52.05%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 304 YASRSYHYNPGYWSGXXXXXXXXXXXXXXXXXSRYRRGYGYYPYYHYRRYGYRPWIWATYGGLASWCGYNNLT 522
Y +R Y Y PGYW G XXXXXXXXXX HY RYGYRPW WAT+GG+A+W GY+ +T
Sbjct: 249 YGNRPY-YPPGYWHGYXXXXXXXXXX-------------------HYYRYGYRPWAWATFGGVAAWIGYSAVT 301 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121829.4489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121829.4489.1 >prot_M-pyrifera_M_contig121829.4489.1 ID=prot_M-pyrifera_M_contig121829.4489.1|Name=mRNA_M-pyrifera_M_contig121829.4489.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp GSRNRSGSSASNRSRSSVQDFGSRRGSNISGLSSGGSRHGRTDQYYRGATback to top mRNA from alignment at M-pyrifera_M_contig121829:3..530+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121829.4489.1 ID=mRNA_M-pyrifera_M_contig121829.4489.1|Name=mRNA_M-pyrifera_M_contig121829.4489.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig121829:3..530+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121829:3..530+ >mRNA_M-pyrifera_M_contig121829.4489.1 ID=mRNA_M-pyrifera_M_contig121829.4489.1|Name=mRNA_M-pyrifera_M_contig121829.4489.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig121829:3..530+ (Macrocystis pyrifera P11B4 male)back to top |