mRNA_M-pyrifera_M_contig121751.4469.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: A0A7S4HH96_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HH96_9EUKA) HSP 1 Score: 105 bits (261), Expect = 8.130e-24 Identity = 53/117 (45.30%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 16 IKRLQDTIYPRIDAFIRDTKSVISAELNADIT--NYTLEQVKDLAGTLKGEMDTQMGEWVENTIMDIVYLEEMRLLDDPEYSKGKH--RLDIVPVTGLVVSVLLRLENEHKTVLDLW 354
IKRLQ+ IYP ID+F++D K V+S + D+T +++L QV++ K +D Q+ +W+ + I DI YL EM L+DPEY+ + L IVP++GL+V + +RLENE KTV +LW
Sbjct: 510 IKRLQNLIYPVIDSFVQDAKIVLSEQFKMDLTGKDFSLPQVEEAFQKEKDSIDPQIRDWIASMIKDIHYLNEMHKLEDPEYASNQADPSLHIVPISGLIVGIFVRLENECKTVCELW 626
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: L8HFW0_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HFW0_ACACA) HSP 1 Score: 96.3 bits (238), Expect = 1.010e-20 Identity = 48/119 (40.34%), Postives = 75/119 (63.03%), Query Frame = 1
Query: 1 QMDTHIKRLQDTIYPRIDAFIRDTKSVISAELNADITNYTLEQVKDLAGTLKGEMDTQMGEWVENTIMDIVYLEEMRLLDDPEYSKGKHRLDIVPVTGLVVSVLLRLENEHKTVLDLWG 357
Q+ IKRL+ IYP+ID FI + + V++ + N + LE+ + + + ++ +W+E+ + DI+YL +M+ L+ P+ K K LDIVPVTGL+V RLENE +TVLD+WG
Sbjct: 479 QVQRLIKRLKSEIYPQIDRFISNAEIVLAEQFNIPYETFALEEAELKFAAERETLGAEVRDWIEDMLKDILYLRQMKRLEKPQNRKEKI-LDIVPVTGLIVGRFYRLENELRTVLDVWG 596
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: F1A120_DICPU (Uncharacterized protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A120_DICPU) HSP 1 Score: 71.2 bits (173), Expect = 5.980e-12 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 16 IKRLQDTIYPRIDAFIRDTKSVISAELNADITNYTLEQVKDLAGTLKGEMDTQMGEWVENTIMDIVYLEEMRLLDDPEYSKGKHRLDIVPVTGLVVSVLLRLENEHKTVLDLWG 357
I++L+ IYP ID FI+ + +V LN D N +KDL K M + + +E+ + D+ YLEEM+ L+ + H IVP++GLV+ R+ENE KT+++L+
Sbjct: 675 IEQLKSEIYPIIDDFIKRSHAVFCDILNVDNLNDN-NSIKDLLNERKPSMKSNLFSQLEDLLSDLEYLEEMKRLEANPEATSFH---IVPISGLVIGFFARIENELKTIIELYS 784
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: UPI000645114D (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000645114D) HSP 1 Score: 70.1 bits (170), Expect = 1.540e-11 Identity = 42/118 (35.59%), Postives = 70/118 (59.32%), Query Frame = 1
Query: 16 IKRLQDTIYPRIDAFIRDTKSVISAELNADITNYTL----EQVKDLAGTLKGEMDTQMGEWVENTIMDIVYLEEMRLLDDPEYSKGKHRLDIVPVTGLVVSVLLRLENEHKTVLDLWG 357
IK L+ I P I+ FI+ + V+S L ++N T+ E++KD + ++D Q+ +++ + D+ YL EM L+D S+ L IVP++GLV++ R+ENE KTV++LW
Sbjct: 703 IKELRQEIQPVINTFIKKSHIVLSEMLGLPLSNVTVQVASERLKDRRQ--QQQIDEQLASSIDDLLSDLEYLREMIHLEDATTSERS--LHIVPISGLVMNTFARIENELKTVVELWN 816
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: D3BT49_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BT49_POLPP) HSP 1 Score: 69.3 bits (168), Expect = 2.820e-11 Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 1
Query: 7 DTHIK--------RLQDTIYPRIDAFIRDTKSVISAELNADITNYTLEQV-----------KDLAGTLKGEMDTQMGEWVENTIMDIVYLEEMRLLDDPEYSKGKHRLDIVPVTGLVVSVLLRLENEHKTVLDLWGHLE 366
DTHI+ +L +IYP I+ F+ K VI +A + N ++ Q+ K+L K D +E DI Y+ EM+ L E + + RLDIVP++G+ L RLENE +TVLD+W HL+
Sbjct: 600 DTHIRIQFKKLVEKLNHSIYPVIELFVLKCKLVILDSFDA-LENTSIAQMETSGHLEMSYLKELFNRRKDVTDKHRCNQIERLYKDIEYILEMKRL---ELNPSEKRLDIVPISGIAFGRLHRLENEMRTVLDIWKHLD 734
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: A0A7S4IX01_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IX01_9EUKA) HSP 1 Score: 68.9 bits (167), Expect = 3.790e-11 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 1
Query: 19 KRLQDTIYPRIDAFIRDTKSVISAELNADITNYTLEQVKDLAGTLKGEMDTQMGEWVENTIMDIVYLEEM-RLLDDPEYSKGKHRLDIVPVTGLVVSVLLRLENEHKTVLDLW 354
K L D +Y I+ FIRD + EL + + + K + Q+ + + + + D YLE+M R+ +D E+SK + R+ +PV+GLV+S RLENEHK+VLDLW
Sbjct: 109 KSLCDKVYRIINDFIRDINFCVMLELKLPNSFIPTSNAQLIEMINKEKFPQQLKQQLIDVVKDKEYLEDMKRMENDKEFSKSR-RMVTIPVSGLVMSKFCRLENEHKSVLDLW 220
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: Q54WV3_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54WV3_DICDI) HSP 1 Score: 66.2 bits (160), Expect = 3.430e-10 Identity = 47/125 (37.60%), Postives = 65/125 (52.00%), Query Frame = 1
Query: 22 RLQDTIYPRIDAFIRDTKSVISAELN----ADITNYT------LEQVKDLAGTLKGEMDTQMGEWVENTIMDIVYLEEMRLLDDPEYSKGKHRLDIVPVTGLVVSVLLRLENEHKTVLDLWGHLE 366
+L +TIYP ID F+ + VI + A IT LE VK+L K ++ +E + DI Y EM+ L++ K RLDIV +TGLV + RLENE +TV+D W HL+
Sbjct: 902 KLAETIYPMIDDFVLKSYLVILDSFDMFTTAKITELEEKGCLQLEFVKNLVLKKKDTLEKSKASQLEKLLKDIHYCIEMKQLENVPQEK---RLDIVTITGLVFGRVHRLENEMRTVVDNWKHLD 1023
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: UPI000644C48C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C48C) HSP 1 Score: 65.5 bits (158), Expect = 6.300e-10 Identity = 43/129 (33.33%), Postives = 70/129 (54.26%), Query Frame = 1
Query: 10 THIKRLQDTIYPRIDAFIRDTKSVIS----------AELNADITNYTLEQVKDLAGTLKGEMDTQMGEWVENTIMDIVYLEEMRLLDDPEYSKGKHRLDIVPVTGLVVSVLLRLENEHKTVLDLWGHLE 366
T +++L +YP+I+ F+ K V+ AEL A+ +++++ L K ++ Q ++ DI YL +MR L+D S + RLDIV ++G+ L RLENE +TV++LW HLE
Sbjct: 684 TVVEKLVRDVYPKIELFVVKCKLVVLDCIGAFDVSLAELEAN-GMLDMDRLRQLYLMHKQNLERQKCSHIDRIFKDIEYLLDMRRLEDTT-SPTEKRLDIVTISGITFGRLHRLENEMRTVVELWKHLE 810
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: A0A8J4PP40_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PP40_9MYCE) HSP 1 Score: 64.7 bits (156), Expect = 1.180e-9 Identity = 44/123 (35.77%), Postives = 62/123 (50.41%), Query Frame = 1
Query: 25 LQDTIYPRIDAFIRDTKSVI---------SAELNADITNYTLEQVKDLAGTLKGEMDTQMGEWVENTIMDIVYLEEMRLLDDPEYSKGKHRLDIVPVTGLVVSVLLRLENEHKTVLDLWGHLE 366
L +TIYP I+ FI +K VI A + + LE +K L K ++ +E I DI Y EM+ L+ + K D+V +TGLV S + RLENE +TVL+ W HL+
Sbjct: 783 LTETIYPAIEDFILKSKLVILDQFDLFNQKASVLEEKGELDLENLKQLFQKKKETLEKSKSLQIEKIIKDIEYCIEMKRLEHHYHEKT---FDVVTITGLVFSRIHRLENEMRTVLENWKHLD 902
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Match: A0A7S4KTD7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KTD7_9EUKA) HSP 1 Score: 63.9 bits (154), Expect = 1.490e-9 Identity = 35/126 (27.78%), Postives = 64/126 (50.79%), Query Frame = 1
Query: 1 QMDTHIKRLQDTIYPRIDAFIRDTKSVISAELNADITNYTLEQVKDLAGTLKGEMDTQMGEWVENTIMDIVYLEEMRLL----DDPEYSKGKHRLDIVPVTGLVVSVLLRLENEHKTVLDLWGHLE 366
Q+ I L +Y R+D ++ + +++++ + A+ L +K ++ + + + I DI YLE M+ + DDP + +VP +GL++S LR E E +T L++WGHLE
Sbjct: 168 QLRNFISSLSAELYTRVDEYVEEGRALLAHQFGAEKEGLDLGSIKLELLAMESTFEPSVYRALCGMIEDIRYLETMKEMEKDVDDPLKKTSRIGAGVVPFSGLILSSFLRKEQEFRTALEVWGHLE 293 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121751.4469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121751.4469.1 >prot_M-pyrifera_M_contig121751.4469.1 ID=prot_M-pyrifera_M_contig121751.4469.1|Name=mRNA_M-pyrifera_M_contig121751.4469.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp MDTHIKRLQDTIYPRIDAFIRDTKSVISAELNADITNYTLEQVKDLAGTLback to top mRNA from alignment at M-pyrifera_M_contig121751:3..431- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121751.4469.1 ID=mRNA_M-pyrifera_M_contig121751.4469.1|Name=mRNA_M-pyrifera_M_contig121751.4469.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig121751:3..431- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121751:3..431- >mRNA_M-pyrifera_M_contig121751.4469.1 ID=mRNA_M-pyrifera_M_contig121751.4469.1|Name=mRNA_M-pyrifera_M_contig121751.4469.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig121751:3..431- (Macrocystis pyrifera P11B4 male)back to top |