mRNA_M-pyrifera_M_contig121193.4367.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: A0A5A7THM1_CUCME (Protein C2-DOMAIN ABA-RELATED 11-like n=5 Tax=Cucumis TaxID=3655 RepID=A0A5A7THM1_CUCME) HSP 1 Score: 68.2 bits (165), Expect = 4.480e-12 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 1 QLRVMVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWGFTHVFGEKGGVDGDVLHVLVRDFDLVSRDDDLGYIDVPLLQLRGRGMVNKAL 297
+L+V+V++ NL+ D ++SDPYVV+ LG +KAKT+V K LNP W F G +L+ V D DL RDD +G + L ++ ++K L
Sbjct: 10 RLKVIVVQGKNLVIRDFRSSDPYVVVKLGKQKAKTKVIKNNLNPVWNEELTFKIDAEPTG-LLNFEVFDKDLFKRDDRMGRASINLQPMQSASRLSKIL 107
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: UPI001900FAE1 (protein C2-DOMAIN ABA-RELATED 11-like n=1 Tax=Benincasa hispida TaxID=102211 RepID=UPI001900FAE1) HSP 1 Score: 66.6 bits (161), Expect = 1.760e-11 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 1 QLRVMVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWGFTHVFGEKGGVDGDVLHVLVRDFDLVSRDDDLGYIDVPLLQLRGRGMVNKAL 297
+L+V++++ NL+ D ++SDPYVV+ LG +KAKT+V K LNP W F G +L+ V D DL RDD +G + L ++ ++K L
Sbjct: 10 RLKVIIVQGKNLVIRDFRSSDPYVVVKLGKQKAKTKVIKSNLNPIWNEELNF-TIGSEPTRLLNFEVFDKDLFKRDDKMGRASINLQPMQSASRLSKIL 107
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: A0A6P8DFN3_PUNGR (protein C2-DOMAIN ABA-RELATED 11 isoform X3 n=4 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DFN3_PUNGR) HSP 1 Score: 66.6 bits (161), Expect = 2.280e-11 Identity = 41/107 (38.32%), Postives = 55/107 (51.40%), Query Frame = 1
Query: 1 QLRVMVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWG--FTHVFGEKGGVDGDVLHVLVRDFDLVSRDDDLGYIDVPLLQLRGRGMVNKALPLRATD 315
QL+V V+R L+ D K+SDPYVVL LG + AKT+V LNP W T E GV LH+ V D D DD +G+ V L + + + L L + +
Sbjct: 19 QLKVTVVRGKRLVIRDFKSSDPYVVLKLGNQTAKTKVISSCLNPVWNEELTLSLSEPVGV----LHIEVFDKDRFKADDKMGHAQVNLQPIVSAARLRQILKLSSGE 121
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: W4F7X5_9STRA (C2 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4F7X5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 5.220e-11 Identity = 46/115 (40.00%), Postives = 58/115 (50.43%), Query Frame = 1
Query: 4 LRVMVLRADNLIAADKKT------SDPYVVLTLGTEKAKTRVEKETLNPAWGFTHVFGEKGGVDGDV--LHVLVRDFDLVSRDDDLGYIDVPLLQLRGRGMVNKALPLRATDKMK 324
LRV V+ A L+A D T SDPYV LT GTE AKT+ K++LNP W FGE +D LH V+D +++ +DLG + V L L LPL MK
Sbjct: 4 LRVKVVSASKLLALDSNTFGGGPSSDPYVRLTCGTETAKTKEVKKSLNPQWHEEFRFGEAVLLDVSTASLHFRVKDHNVLGPAEDLGEVTVALEPLLPSQWNKLTLPLETHTSMK 118
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: C0JA89_9ORYZ (ZAC n=10 Tax=Oryza TaxID=4527 RepID=C0JA89_9ORYZ) HSP 1 Score: 67.4 bits (163), Expect = 5.690e-11 Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 4 LRVMVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWG--FTHVFGEKGGVDGDVLHVLVRDFDLVSRDDDLGYIDVPL 258
L+V V+R L D +SDPYVVLTLG +KAKTRV K LNP W T +K G L + V D D++SRDD +G +V L
Sbjct: 167 LKVKVIRGTKLAVRDILSSDPYVVLTLGQQKAKTRVIKSNLNPVWNEVLTLSVPQKYGP----LKLQVYDHDVLSRDDIMGEAEVDL 249
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: J3MFQ9_ORYBR (Uncharacterized protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3MFQ9_ORYBR) HSP 1 Score: 67.0 bits (162), Expect = 1.080e-10 Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 4 LRVMVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWG--FTHVFGEKGGVDGDVLHVLVRDFDLVSRDDDLGYIDVPLLQLRGRGMVNKAL 297
L+V V+R L D +SDPYVVLTLG +KAKTRV K LNP W T ++ G L + V D D++SRDD +G +V L + M+N A+
Sbjct: 509 LKVKVIRGTKLAVRDILSSDPYVVLTLGQQKAKTRVIKSNLNPVWNEVLTLSVPQRYGP----LKLQVYDHDVLSRDDIMGEAEVDL-----QPMINAAM 599
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: A0A6P6UC27_COFAR (protein C2-DOMAIN ABA-RELATED 11 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6UC27_COFAR) HSP 1 Score: 64.3 bits (155), Expect = 1.440e-10 Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 1 QLRVMVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWG--FTHVFGEKGGVDGDVLHVLVRDFDLVSRDDDLGYIDVPLLQLRGRGMVNKALPLRATDKM 321
Q++V V+ L+ D K+SDPYV+L LG + AKT+V LNP W F+ F E GV L + V D D DD +G+ ++ L L + + L + ATD M
Sbjct: 7 QIKVEVVHGKRLVIRDFKSSDPYVLLKLGNQTAKTKVINSCLNPVWNEEFSFTFSEPVGV----LKLEVFDKDRFKSDDKMGHAELSLQPLVAAARLKQILSV-ATDGM 110
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: A0A8J5TBJ0_ZIZPA (Uncharacterized protein n=3 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5TBJ0_ZIZPA) HSP 1 Score: 66.2 bits (160), Expect = 1.740e-10 Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 4 LRVMVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWG--FTHVFGEKGGVDGDVLHVLVRDFDLVSRDDDLGYIDVPL 258
L+V V+R L D +SDPYVVLTLG +KAKTRV K LNP W T ++ G L + V D D++SRDD +G +V L
Sbjct: 212 LKVKVIRGTKLAVRDMLSSDPYVVLTLGQQKAKTRVIKSNLNPFWNEVLTLSVPQRYGP----LKLQVYDHDVLSRDDIMGEAEVDL 294
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: A0A484M0P5_9ASTE (C2 domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484M0P5_9ASTE) HSP 1 Score: 63.9 bits (154), Expect = 1.950e-10 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 1 QLRVMVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWG--FTHVFGEKGGVDGDVLHVLVRDFDLVSRDDDLGYIDVPLLQL 267
+L++ V++ L+ D ++SDPY++L LG + AKT+V LNP W FT + GV L + V D D DD++GY D+ L L
Sbjct: 7 ELKIKVVQGRKLVVRDFRSSDPYIILELGNQAAKTKVINSCLNPVWNEEFTFPLSQPAGV----LKLKVFDKDRFKVDDEMGYADLDLRPL 93
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Match: A0A0E0LDE8_ORYPU (Uncharacterized protein n=2 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0LDE8_ORYPU) HSP 1 Score: 66.2 bits (160), Expect = 2.010e-10 Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 4 LRVMVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWG--FTHVFGEKGGVDGDVLHVLVRDFDLVSRDDDLGYIDVPL 258
L+V V+R L D +SDPYVVLTLG +KAKT+V K LNP W T +K G L + V D D++SRDD +G +V L
Sbjct: 167 LKVKVIRGTKLAVRDILSSDPYVVLTLGQQKAKTKVIKSNLNPVWNEVLTLSVPQKYGP----LKLQVYDHDVLSRDDIMGEAEVDL 249 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121193.4367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121193.4367.1 >prot_M-pyrifera_M_contig121193.4367.1 ID=prot_M-pyrifera_M_contig121193.4367.1|Name=mRNA_M-pyrifera_M_contig121193.4367.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp MVLRADNLIAADKKTSDPYVVLTLGTEKAKTRVEKETLNPAWGFTHVFGEback to top mRNA from alignment at M-pyrifera_M_contig121193:208..531+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121193.4367.1 ID=mRNA_M-pyrifera_M_contig121193.4367.1|Name=mRNA_M-pyrifera_M_contig121193.4367.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig121193:208..531+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121193:208..531+ >mRNA_M-pyrifera_M_contig121193.4367.1 ID=mRNA_M-pyrifera_M_contig121193.4367.1|Name=mRNA_M-pyrifera_M_contig121193.4367.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig121193:208..531+ (Macrocystis pyrifera P11B4 male)back to top |