mRNA_M-pyrifera_M_contig121178.4363.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: A0A537S8U3_9PROT (Aspartate/glutamate racemase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S8U3_9PROT) HSP 1 Score: 179 bits (455), Expect = 2.450e-54 Identity = 86/151 (56.95%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAS 453
GA A VTS+ GHFCIRELEA+SPLP++NAIPA+D + +T+G+LGTR V+ET LY GISSA +V P+GD LD H Y++MA GR QR F +G+ LC QGA+AV L GTDLFL F G + GFPV+DCA IHV+A+ S
Sbjct: 71 GASFAAVTSMGGHFCIRELEAISPLPILNAIPAVDAAIRQRNLRTIGVLGTRTVMETGLYAGISSAGIVRPEGDALDLVHKAYIEMAIVGRVTDAQRRVFFSIGQHLCGAQGAEAVMLGGTDLFLAFQGQDCGFPVLDCAEIHVEAIYQRS 221
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: A0A7C2QZX2_9HYPH (Aspartate/glutamate racemase family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QZX2_9HYPH) HSP 1 Score: 179 bits (454), Expect = 3.470e-54 Identity = 88/151 (58.28%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAS 453
GA AA VTS+ GHFCIREL AVSPLPLINA+P +D + +TVG++GTR V+ETRLYG ISSA +V P+GD LD H HYV+MA GR QR F G +L ++GA+ V L GTDLFL F G GFPV+DCA IHV+A+ AS
Sbjct: 71 GAQAAAVTSMGGHFCIRELAAVSPLPLINALPEVDAAIRRRNLRTVGIIGTRMVMETRLYGAISSAAVVAPEGDALDEVHRHYVEMATVGRVSDAQRRVFFAAGARLVRDRGAEVVLLGGTDLFLAFQGESCGFPVLDCADIHVEAIYRAS 221
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: A0A6A7MCZ3_9PROT (Aspartate/glutamate racemase family protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7MCZ3_9PROT) HSP 1 Score: 177 bits (448), Expect = 2.650e-53 Identity = 83/152 (54.61%), Postives = 111/152 (73.03%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAST 456
GA AA VTS+ GHFCI+ELEA+SPLPLIN + +D H ++ K V ++GTR V+E+RLYG I+SAE++ P+GD++ H YV MA+SG ++QR F GRKLC E+GA+AV L GTDLFL F G + GFPV+DCA +HV+A+ S+
Sbjct: 71 GAAAAAVTSMGGHFCIKELEAISPLPLINGLDPVDAHLRSRKLKKVAIIGTRTVMESRLYGKIASAEVLAPEGDEVGQVHRCYVTMAQSGHVAEEQRKTFFAAGRKLCGERGAEAVMLGGTDLFLAFVGHDAGFPVIDCADLHVEAIYKKSS 222
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: A0A1Q3KZM9_9PROT (Aspartate racemase n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KZM9_9PROT) HSP 1 Score: 176 bits (445), Expect = 7.770e-53 Identity = 85/151 (56.29%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAS 453
GA AA VTS+ GHFC R+LEA+SPLPLINAIPA++ A+G K VG++GTRNV+E+ LYGGI+S E+V P+G+ L H YV MA G + QR F +G LC ++GA+A+ L GTDLFL F G + GFPV+DCA IHV+A+ A S
Sbjct: 71 GARAAAVTSMGGHFCARDLEAISPLPLINAIPAVNAALGARGLKRVGIIGTRNVMESSLYGGITSVEVVRPEGETLAKVHDAYVAMAVPGIVTEAQREVFYTVGAALCRDRGAEAIVLGGTDLFLAFAGQDPGFPVIDCADIHVEAIYARS 221
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: A0A521QN78_9HYPH (Aspartate/glutamate racemase family protein n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QN78_9HYPH) HSP 1 Score: 175 bits (443), Expect = 1.560e-52 Identity = 81/151 (53.64%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAS 453
GA AA VTS+ GHFC ++LEA+SPLPL+NAIPA++ A+G + +G++GTRNV+E+ LYGGI+S E++ P+G+ L H YV MA G + QR F +G +LC + GA+A+ L GTDLFL F G + GFPV+DCA IHVDA+ A S
Sbjct: 71 GAKAAAVTSMGGHFCAQDLEAISPLPLVNAIPAVNEALRARGLRRIGIIGTRNVMESSLYGGITSVEVIHPEGEKLGQVHDAYVAMAVPGHVTEGQRSLFFKIGAELCRDHGAEAIVLGGTDLFLAFAGHDPGFPVIDCADIHVDAIYARS 221
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: A0A1F2ZSY3_9PROT (Aspartate racemase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F2ZSY3_9PROT) HSP 1 Score: 171 bits (432), Expect = 6.810e-51 Identity = 84/151 (55.63%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAS 453
GA AA +TS+ GHFC+REL A+SPLP++NAIP +D A K +G++GTR V+ETRLYGGI S E+V +G DLD H +YV+MA GR + QR F + R+L A +GA+A+ L GTDLFL F G + GF V+DCA IHVDAL A S
Sbjct: 71 GAKAAAITSMGGHFCVRELVAISPLPILNAIPEIDAALARSKLKKIGIIGTRTVMETRLYGGIYSVEVVPTEGGDLDRVHNNYVEMATVGRVTEAQRQVFFEASRRLVA-RGAEAIMLGGTDLFLAFAGHDPGFAVIDCADIHVDALYAKS 220
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: A0A259MKC3_9PROT (Aspartate racemase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MKC3_9PROT) HSP 1 Score: 168 bits (426), Expect = 5.510e-50 Identity = 83/151 (54.97%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAS 453
GA A VTS+ GHFC+ EL A+SPLP++NAIPA+D AA ++ +G+LGTR V+E++LYGGI S E+V +G LD H YV MA G + QR F + GR LCA +GA+A+ L GTDLFL F G + GFPV+DCA IHVDA+ A S
Sbjct: 71 GAQAVAVTSMGGHFCVNELMAISPLPVLNAIPAVDASLAAGKFRKIGILGTRTVMESKLYGGIPSVEVVPTEGAALDLVHDTYVAMATIGHVTEAQRQVFFEAGRALCA-RGAEAILLGGTDLFLAFAGHDPGFPVIDCADIHVDAIHATS 220
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: UPI001C24178D (aspartate/glutamate racemase family protein n=1 Tax=Reyranella sp. MMS21-HV4-11 TaxID=2849149 RepID=UPI001C24178D) HSP 1 Score: 167 bits (424), Expect = 1.040e-49 Identity = 83/151 (54.97%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAS 453
GA AA +TS+ GHFC+ EL A+SPLP++NAIPA+D A ++ +G+LGTR V+ET+LYGGI S E+V + LD H +YV MA G + QR F D GR+LC+ +GA+A+ L GTDLFL F G E GFPV+DCA IHVDA+ A S
Sbjct: 71 GAQAAAITSMGGHFCVNELMAISPLPILNAIPAVDASLAKGKFRKIGILGTRTVMETKLYGGIPSVEVVPTEA--LDLVHDNYVAMATVGHVTEAQRRVFFDAGRELCS-RGAEAIMLGGTDLFLAFAGHEPGFPVIDCADIHVDAIYAKS 218
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: A0A4R5GVN6_9ALTE (Aspartate/glutamate racemase family protein n=1 Tax=Alteromonadaceae bacterium M269 TaxID=2546219 RepID=A0A4R5GVN6_9ALTE) HSP 1 Score: 166 bits (420), Expect = 4.590e-49 Identity = 77/151 (50.99%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAS 453
G DA ++++AGHFCI ELEA+SPLP++N IP L+ F +G+K +GLLG++ +E+++YGGI S E + P+GD LD +Y+ MA SG+A QR F GRK+ E GAD + LAGTDLFL F+G + GFPVVD A IH++ L + S
Sbjct: 70 GCDAVAISTMAGHFCIDELEAISPLPILNIIPILNDAFGERGFKKIGLLGSKVAMESKIYGGIDSVECIAPRGDALDIVSENYLSMALSGKALDSQREVFFREGRKMIEEDGADVIVLAGTDLFLAFEGHDPGFPVVDSADIHIEKLASLS 220
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Match: A0A512NF29_9HYPH (Aspartate racemase n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NF29_9HYPH) HSP 1 Score: 165 bits (418), Expect = 8.950e-49 Identity = 81/152 (53.29%), Postives = 107/152 (70.39%), Query Frame = 1
Query: 1 GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGTRNVLETRLYGGISSAELVLPQGDDLDATHAHYVDMAKSGRAEQQQRGFFLDMGRKLCAEQGADAVALAGTDLFLVFDGLETGFPVVDCARIHVDALVAAST 456
GA AA VTS+ GHFCI+ELEA+SPLPLIN + +D +G K VG++GTR V+ ++LYG I+ AE++ P+GD+ + YVDMA GR QQR F GR+L A++GA+AV L GTDLFL F G + GFPV+DCA +HVDA+ S+
Sbjct: 71 GAQAAAVTSMGGHFCIKELEAISPLPLINGLDPVDAAINQRGLKRVGIIGTRVVMASKLYGKITKAEVIAPEGDEFERVQQCYVDMASIGRVVDQQRQTFFAAGRRL-ADRGAEAVLLGGTDLFLAFAGHDCGFPVIDCADVHVDAIYEKSS 221 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121178.4363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121178.4363.1 >prot_M-pyrifera_M_contig121178.4363.1 ID=prot_M-pyrifera_M_contig121178.4363.1|Name=mRNA_M-pyrifera_M_contig121178.4363.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp GADAAVVTSLAGHFCIRELEAVSPLPLINAIPALDLHFAAQGYKTVGLLGback to top mRNA from alignment at M-pyrifera_M_contig121178:76..534- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121178.4363.1 ID=mRNA_M-pyrifera_M_contig121178.4363.1|Name=mRNA_M-pyrifera_M_contig121178.4363.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig121178:76..534- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121178:76..534- >mRNA_M-pyrifera_M_contig121178.4363.1 ID=mRNA_M-pyrifera_M_contig121178.4363.1|Name=mRNA_M-pyrifera_M_contig121178.4363.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig121178:76..534- (Macrocystis pyrifera P11B4 male)back to top |