mRNA_M-pyrifera_M_contig121146.4349.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: A0A841HMV5_9GAMM (Putative oxidoreductase n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HMV5_9GAMM) HSP 1 Score: 137 bits (345), Expect = 2.620e-39 Identity = 68/105 (64.76%), Postives = 85/105 (80.95%), Query Frame = 1
Query: 4 WDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVDHLLTRQR 318
WD+T FLF EEYRVPLL P LAAV GTAGELLF L+ G+CGRLSA+GL AVN +AV +Y+HVLL GFEAA+AQH LWG ML+V+++YGPG+ S+D +++ R
Sbjct: 47 WDSTQFLFREEYRVPLLPPDLAAVVGTAGELLFPLLLIFGICGRLSALGLQAVNVLAVVSYSHVLLQEGFEAAIAQHYLWGFMLLVLMVYGPGRWSMDGVVSDHR 151
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: A0A6L8BDB8_9PROT (DoxX family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L8BDB8_9PROT) HSP 1 Score: 132 bits (332), Expect = 2.390e-37 Identity = 64/106 (60.38%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 1 SWDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVDHLLTRQR 318
SWD+TLFLF EYRVPLLSP LAAV GT GELLF ++ VGL GRL A+GLS VN +AV +YAHV+ SAGFE + H +WG+ML+ ++++GPG++S+D+L+ R R
Sbjct: 46 SWDSTLFLFEHEYRVPLLSPWLAAVLGTVGELLFPLMLFVGLAGRLGALGLSVVNVVAVISYAHVIFSAGFENTVNDHWIWGLMLLAVMVFGPGKLSLDYLINRYR 151
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: A0A521WBG7_9GAMM (DoxX family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521WBG7_9GAMM) HSP 1 Score: 131 bits (330), Expect = 4.150e-37 Identity = 65/101 (64.36%), Postives = 80/101 (79.21%), Query Frame = 1
Query: 4 WDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVDHLL 306
W+TT FLF EEY VPLL+P AAV GTAGEL+F L+ +GL GRL+A+GLS VN +AV AYAHVLL GFEAAL QH LWG+ML+V+ ++GPG++S D L
Sbjct: 44 WETTRFLFQEEYHVPLLAPAAAAVAGTAGELVFPVLLVLGLFGRLAAIGLSVVNGVAVLAYAHVLLQDGFEAALGQHCLWGLMLLVVAVFGPGRLSFDRWL 144
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: A0A524KC94_9GAMM (DoxX family protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A524KC94_9GAMM) HSP 1 Score: 130 bits (328), Expect = 9.690e-37 Identity = 65/98 (66.33%), Postives = 79/98 (80.61%), Query Frame = 1
Query: 4 WDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVD 297
W+TTLFLF EEY P+LSP LAA+ GTAGEL+F L+ GL GR +AVGL AVN MAV AYAHVLL+ GFEAAL QH LWG ML+++ +YGPG++S+D
Sbjct: 48 WETTLFLFQEEYHTPVLSPQLAAIVGTAGELIFPLLLIPGLFGRPAAVGLLAVNVMAVVAYAHVLLADGFEAALGQHYLWGFMLVILAVYGPGRLSLD 145
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: A0A7C2NTP0_9GAMM (DoxX family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C2NTP0_9GAMM) HSP 1 Score: 129 bits (324), Expect = 4.810e-36 Identity = 64/103 (62.14%), Postives = 81/103 (78.64%), Query Frame = 1
Query: 1 SWDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVDHLLT 309
SW T+FLF EY+VP+L+P LAAV GTAGEL+F L+ GL GRLS+VGL AVN MAV +YAHVLL+ GFEAA+ QH LWG L+V+ ++GPG++S+D LT
Sbjct: 47 SWQNTVFLFRNEYQVPVLTPYLAAVAGTAGELVFPVLLIAGLAGRLSSVGLFAVNVMAVVSYAHVLLTEGFEAAVGQHYLWGFALLVLAVFGPGRLSLDRALT 149
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: A0A829YDE9_9GAMM (Uncharacterized protein n=3 Tax=Steroidobacter TaxID=469322 RepID=A0A829YDE9_9GAMM) HSP 1 Score: 128 bits (321), Expect = 1.120e-35 Identity = 64/105 (60.95%), Postives = 81/105 (77.14%), Query Frame = 1
Query: 4 WDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVDHLLTRQR 318
W+ T+ LF EYRVPLLSP LAA+ GTAGEL+F L+ +GL GR+SA+GL AVNA+AV +YAHVL GF AA+ QH LWG +L+V+ +YGPG S+DH L R+R
Sbjct: 47 WEQTVALFEYEYRVPLLSPQLAAIAGTAGELVFPTLLMLGLFGRISALGLQAVNALAVISYAHVLFQEGFAAAIGQHYLWGYILLVLTVYGPGAWSLDHQLRRRR 151
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: UPI000E3218F8 (DoxX family protein n=1 Tax=Steroidobacter cummioxidans TaxID=1803913 RepID=UPI000E3218F8) HSP 1 Score: 128 bits (321), Expect = 1.120e-35 Identity = 65/105 (61.90%), Postives = 81/105 (77.14%), Query Frame = 1
Query: 4 WDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVDHLLTRQR 318
WD+TL LF EYRVPLLSP LAA+ GTAGEL+F L+ +GL GR+SA+GL AVN +AV +YAHVLL GF AA+ QH LWG +L+V+ +YGPG S+DH L +R
Sbjct: 47 WDSTLALFEYEYRVPLLSPHLAAIVGTAGELVFPTLLILGLFGRISALGLQAVNVLAVVSYAHVLLQDGFAAAIGQHYLWGYILLVLTVYGPGAWSLDHQLRGRR 151
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: F8UI89_9ZZZZ (DoxX (Fragment) n=1 Tax=uncultured microorganism TaxID=358574 RepID=F8UI89_9ZZZZ) HSP 1 Score: 125 bits (314), Expect = 2.770e-35 Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 1
Query: 16 LFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVDHLLT-RQRT 321
LFLF EEYRVPLLSP LAA+ GTAGEL+F L+ +GL R +A+GLSAVN +AV +YAHVLL++GFEAAL QH+LWG ML+V+ I+GPG S D L+ R RT
Sbjct: 1 LFLFQEEYRVPLLSPPLAALAGTAGELVFPVLLGLGLFSRFAALGLSAVNVLAVVSYAHVLLASGFEAALGQHILWGFMLLVLAIHGPGPWSADGLIAGRART 103
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: UPI0019344716 (DoxX family protein n=1 Tax=Steroidobacter gossypii TaxID=2805490 RepID=UPI0019344716) HSP 1 Score: 125 bits (314), Expect = 1.220e-34 Identity = 63/105 (60.00%), Postives = 79/105 (75.24%), Query Frame = 1
Query: 4 WDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVDHLLTRQR 318
WD+TL LF EYRVPLL+P LAA+ GTAGEL+F L+ +GL GR+SA+GL AVN +AV +YAHVL GF AA+ QH LWG +L+V+ YGPG S+DH L +R
Sbjct: 47 WDSTLALFEYEYRVPLLTPQLAAIAGTAGELVFPTLLILGLFGRISALGLQAVNVLAVVSYAHVLYQEGFAAAVGQHYLWGFILLVLTFYGPGVWSLDHWLNHKR 151
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Match: A0A3N5L9U9_9GAMM (DoxX family protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5L9U9_9GAMM) HSP 1 Score: 120 bits (301), Expect = 1.080e-32 Identity = 59/101 (58.42%), Postives = 77/101 (76.24%), Query Frame = 1
Query: 4 WDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGLSAVNAMAVYAYAHVLLSAGFEAALAQHVLWGMMLIVIVIYGPGQISVDHLL 306
W+TT FLF EEY PLL P +AA+ GTAGEL+F L+ VGL R +A GL AVN +AV +Y+HVLL+ GFEAAL QH LWG ML+V+++ GPG+ ++D +L
Sbjct: 45 WETTRFLFEEEYHTPLLPPLVAAIAGTAGELVFPVLLIVGLLSRYAAAGLFAVNVLAVVSYSHVLLTEGFEAALGQHYLWGFMLLVVIVMGPGRWALDAML 145 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121146.4349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121146.4349.1 >prot_M-pyrifera_M_contig121146.4349.1 ID=prot_M-pyrifera_M_contig121146.4349.1|Name=mRNA_M-pyrifera_M_contig121146.4349.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp SWDTTLFLFAEEYRVPLLSPTLAAVTGTAGELLFSALVAVGLCGRLSAVGback to top mRNA from alignment at M-pyrifera_M_contig121146:214..534- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121146.4349.1 ID=mRNA_M-pyrifera_M_contig121146.4349.1|Name=mRNA_M-pyrifera_M_contig121146.4349.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig121146:214..534- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121146:214..534- >mRNA_M-pyrifera_M_contig121146.4349.1 ID=mRNA_M-pyrifera_M_contig121146.4349.1|Name=mRNA_M-pyrifera_M_contig121146.4349.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig121146:214..534- (Macrocystis pyrifera P11B4 male)back to top |