mRNA_M-pyrifera_M_contig121019.4326.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: A0A2D8GIJ1_9ACTN (Aminotransferase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GIJ1_9ACTN) HSP 1 Score: 121 bits (304), Expect = 9.010e-31 Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 1 IESRIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALISAL 300
I +R+Q +++ LR RL +VP A VRD+GR RCGIVTFSL DL V A LR GINVSIVPPASAL+DT +RDLPP++RAS+H YNT E+D LI+ L
Sbjct: 301 IATRVQGLAETLRGRLTDDVPQATVRDLGRERCGIVTFSLDGADLAAVHAALRDAGINVSIVPPASALIDTRKRDLPPMIRASVHYYNTEAEIDQLITEL 400
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: UPI00142302BC (aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI00142302BC) HSP 1 Score: 95.5 bits (236), Expect = 4.720e-21 Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 IESRIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALISALA 303
I R+Q +++ LR RL AE+P VRD+GR RCG+VTF+ + + LRA+GINVS+ PAS LD R+LPP++RAS+H YNT +E++ LA
Sbjct: 289 IRDRVQRLAERLRHRL-AELPGITVRDLGRTRCGLVTFTSSLMEADEIHRHLRARGINVSVTTPASTRLDAEARNLPPMVRASVHYYNTENEIERFCDVLA 388
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: A0A2S6TJD8_9PROT (Putative cysteine desulfurase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin2 TaxID=2013075 RepID=A0A2S6TJD8_9PROT) HSP 1 Score: 95.1 bits (235), Expect = 6.600e-21 Identity = 47/102 (46.08%), Postives = 70/102 (68.63%), Query Frame = 1
Query: 10 RIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALISALAQPAP 315
RI ++ LR+ L A++ + RD+G RCGIV F++GD VK +L +GINVS+ P+S L+D + RDLPP++RAS+H YN+ +EVD L++ L+ AP
Sbjct: 292 RINALATRLRSGL-ADIGSVQSRDIGAERCGIVAFTVGDLPSAAVKDELAVRGINVSVSGPSSTLIDAMRRDLPPIVRASVHYYNSEEEVDTLLNVLSDIAP 392
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: UPI001AEC2723 (Aminotransferase class V-fold PLP-dependent enzyme n=2 Tax=Microbispora oryzae TaxID=2806554 RepID=UPI001AEC2723) HSP 1 Score: 91.3 bits (225), Expect = 1.630e-19 Identity = 52/100 (52.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 1 IESRIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALISAL 300
IE RI + + LR RL A VP V D G RCGIVTF++ D V A LR +GINVS+ P SA D R LPP++RAS+H YNT DE+D L +AL
Sbjct: 289 IEERITGLGEGLRERLRA-VPGVSVHDQGTRRCGIVTFTVAGHDSADVVALLRERGINVSVSRPGSARWDFEARGLPPMVRASVHYYNTEDELDRLCAAL 387
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: A0A1Z9SPS4_9PROT (Aminotransferase n=1 Tax=Rhodospirillaceae bacterium TMED256 TaxID=1986865 RepID=A0A1Z9SPS4_9PROT) HSP 1 Score: 90.1 bits (222), Expect = 4.550e-19 Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 10 RIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALISALA 303
R+Q ++ LR L + +P EVRD+GRV+CGIVTF+L D D +KA L + INVS+ P+S LLD R+LPP++RAS+H YN E+ L+ A++
Sbjct: 290 RVQVLAGTLRDGLSS-IPGVEVRDIGRVQCGIVTFTLEDVDALDIKAALATRRINVSVSNPSSTLLDASRRNLPPVVRASVHYYNDDAEIARLLEAIS 386
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: A0A848VR88_9BACT (Aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A848VR88_9BACT) HSP 1 Score: 89.7 bits (221), Expect = 6.080e-19 Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 IESRIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALISALA 303
I SR+ ++ LR+ L E+PD V D G V+ G VTFS RD +K+ L A+GIN S+ P+ ALLD + R LP ++RAS+H YNT +E++AL+ AL+
Sbjct: 287 IRSRVDGLAGTLRSAL-REIPDITVHDSGLVKSGTVTFSHRKRDATEIKSALLAQGINTSVAVPSGALLDALNRGLPDMVRASVHYYNTVEEIEALVEALS 386
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: A0A2V6WA42_9BACT (Aminotransferase (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6WA42_9BACT) HSP 1 Score: 84.0 bits (206), Expect = 9.170e-19 Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 7 SRIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALISALAQPA 312
+R+Q ++ ALRARL EVP V D+G +R GIV+F++ D D VKA LRA INV++ P LLD R L ++RAS+H YNT +E+D L++ +A+ A
Sbjct: 15 ARVQMLAAALRARL-TEVPGVGVHDLGPMRGGIVSFTVRDVDAARVKAALRAVRINVTVSPARGTLLDMRARGLREVVRASVHYYNTDEEIDRLVAEVARLA 115
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: A0A538MPF8_9ACTN (Aminotransferase class V-fold PLP-dependent enzyme n=3 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538MPF8_9ACTN) HSP 1 Score: 89.0 bits (219), Expect = 1.180e-18 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 10 RIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALI 291
R+ + D LRARL EV VRD+G VRCGIVTF+L + +K L + INV++ PP+S LLD+ R LP L+RAS+H YNT +E+D L+
Sbjct: 292 RVVALGDNLRARL-GEVEGVTVRDLGAVRCGIVTFTLDGVEASELKDRLARERINVTVSPPSSTLLDSTARSLPELVRASVHYYNTDEEIDRLV 384
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: A0A192IGW0_9HYPH (Aminotransferase class V n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IGW0_9HYPH) HSP 1 Score: 89.0 bits (219), Expect = 1.200e-18 Identity = 47/102 (46.08%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 1 IESRIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALISALAQ 306
IE+R+ E++ LR RLD + VRD+GR RCGIVTF+ V++ L A+GIN+S+ S L+D +R+LP L+RAS+H YNT +EVD + A+A+
Sbjct: 293 IEARVTELARVLRERLDG-IAGVTVRDLGRRRCGIVTFTHDSMPAGEVRSTLGAQGINLSVSDAGSTLIDMTKRNLPDLVRASVHYYNTLEEVDRFVEAVAR 393
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Match: A0A512DM57_9PROT (Aminotransferase class V n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DM57_9PROT) HSP 1 Score: 88.6 bits (218), Expect = 1.570e-18 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 10 RIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKADLRAKGINVSIVPPASALLDTVERDLPPLLRASLHIYNTHDEVDALISAL 300
R++ + D LR+R+ A +P VRD+G VRCGIVTF+ G R +KA L +GINVS+ AS LLD R L ++RAS+H YNT DE+D L+ AL
Sbjct: 293 RVRNLGDLLRSRI-APLPGYTVRDLGEVRCGIVTFT-GPRPPAEIKALLAEQGINVSVTKAASTLLDMNARGLTEMVRASVHYYNTEDEIDRLVEAL 387 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121019.4326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121019.4326.1 >prot_M-pyrifera_M_contig121019.4326.1 ID=prot_M-pyrifera_M_contig121019.4326.1|Name=mRNA_M-pyrifera_M_contig121019.4326.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp IESRIQEVSDALRARLDAEVPDAEVRDMGRVRCGIVTFSLGDRDLPTVKAback to top mRNA from alignment at M-pyrifera_M_contig121019:214..531- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121019.4326.1 ID=mRNA_M-pyrifera_M_contig121019.4326.1|Name=mRNA_M-pyrifera_M_contig121019.4326.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig121019:214..531- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121019:214..531- >mRNA_M-pyrifera_M_contig121019.4326.1 ID=mRNA_M-pyrifera_M_contig121019.4326.1|Name=mRNA_M-pyrifera_M_contig121019.4326.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig121019:214..531- (Macrocystis pyrifera P11B4 male)back to top |