mRNA_M-pyrifera_M_contig120559.4234.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: A0A7S1G6W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6W4_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.150e-25 Identity = 54/134 (40.30%), Postives = 86/134 (64.18%), Query Frame = 1
Query: 4 VVPLAEFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTALLSV-CMTNRMSPQQLQRVADDGATDLTARIFAEAAPSDSGSVSFAEFADWYTAGGYEHMPWLELLDVNKW 402
VV EF +GF +L +G KS+KL++A+++F E GDG + R+ +W++LR+F+T L+SV ++ R+ ++Q + D A +LT +F+ A D G +S+ EF WY AGG++ +PWLELLD+ KW
Sbjct: 132 VVDFDEFLSGFSLLVQGSKSDKLALAFRMFDE----DGDGY------ISRLEMWKYLRAFLTMLMSVNTLSQRLPVTEVQTLVDKAAVELTKAVFSSADLDDDGRISYEEFGQWYNAGGFDIIPWLELLDLRKW 255
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: A0A6H5JYX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX4_9PHAE) HSP 1 Score: 104 bits (259), Expect = 2.690e-23 Identity = 59/131 (45.04%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 19 EFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTALLSVCM-TNRMSPQQLQRVADDGATDLTARIFAEAAPSDSGSVSFAEFADWYTAGGYEHMPWLELLDVNKWDA 408
E +GF +L G KS KL+ A+ L E GD ERL R LWR+ RSF+TAL+++ ++ +S ++L R DDGA +A IFAE A + F EFA WYT GG+ PWLELLD+ KW A
Sbjct: 1099 ELASGFSLLCAGSKSAKLAFAFGLHDE----DGD------ERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEFAAWYTEGGFRVSPWLELLDIGKWVA 1219
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: D7FUX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX5_ECTSI) HSP 1 Score: 102 bits (255), Expect = 9.290e-23 Identity = 58/129 (44.96%), Postives = 76/129 (58.91%), Query Frame = 1
Query: 19 EFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTALLSVCM-TNRMSPQQLQRVADDGATDLTARIFAEAAPSDSGSVSFAEFADWYTAGGYEHMPWLELLDVNKW 402
E +GF +L G KS KL+ A+ L E GD ERL R LWR+ RSF+TAL+++ ++ +S ++L R DDGA +A IFAE A + F EFA WYT GG+ PWLELLD+ KW
Sbjct: 1087 ELASGFSLLCAGSKSAKLAFAFGLHDE----DGD------ERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEFAAWYTEGGFRVSPWLELLDMGKW 1205
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: A0A7S2FUE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FUE5_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.760e-22 Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 7 VPLAEFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTALLSVCMTNR-MSPQQLQRVADDGATDLTARIFAEAA-----PSDSGSVSFAEFADWYTAGGYEHMPWLELLDVNKW 402
V AE GF +L G KSEKL+VAW+L A +S G + RL R +WRFLR+++ ++ V T R ++P +L AD GA + A +F +A ++ S++F +FA WYT GGY+ W ELLD+NKW
Sbjct: 113 VNAAELAVGFTLLCAGNKSEKLAVAWELIAGSS--GGAQSLENPARLTRRGVWRFLRAYLKMIIGVSGTIRGLTPSELACAADRGAVWMAALVFKDAKGRTRHQANHKSITFDDFAVWYTFGGYQVASWFELLDLNKW 248
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: A0A7S2FWU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWU8_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.340e-21 Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 7 VPLAEFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTALLSVCMTNR-MSPQQLQRVADDGATDLTARIFAEAA-----PSDSGSVSFAEFADWYTAGGYEHMPWLELLDVNKW 402
V AE GF +L G KSEKL+VAW+L A +S G + RL R +WRFLR+++ ++ V T R ++P +L AD GA + A +F +A ++ S++F +FA WYT GGY+ W ELLD+NKW
Sbjct: 113 VNAAELAVGFTLLCAGNKSEKLAVAWELIAGSS--GGAQSLENPARLTRRGVWRFLRAYLKMIIGVSGTIRGLTPSELACAADRGAVWMAALVFKDAKGRTRHQANHKSITFDDFAVWYTFGGYQVASWFELLDLNKW 248
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: A0A7S3XMH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMH2_HETAK) HSP 1 Score: 94.7 bits (234), Expect = 2.000e-21 Identity = 55/133 (41.35%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 7 VPLAEFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTALLSVCM-TNRMSPQQLQRVADDGATDLTARIFAEAAPSDSGSVSFAEFADWYTAGGYEHMPWLELLDVNKW 402
V + EF GF +L G KS KL+ A+ L E GDG RL R LWRFLR+F++ L+S+ + M +L + D+GA A IF + ++ + F E A WYT GGY PWLELLD+ KW
Sbjct: 87 VDVLEFMGGFALLCAGNKSGKLAYAFDLLDE----DGDG------RLSRRGLWRFLRAFLSVLMSMSSKASSMEASELVDLIDNGAVWTAATIFEQCDLAEKNKIDFEELAAWYTEGGYRLSPWLELLDLKKW 209
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: A0A7S0GD91_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GD91_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.990e-19 Identity = 55/139 (39.57%), Postives = 75/139 (53.96%), Query Frame = 1
Query: 19 EFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTALLSVCMTN-RMSPQQLQRVADDGATDLTARIFAEAAPSDSG----------SVSFAEFADWYTAGGYEHMPWLELLDVNKW 402
E +GF VL G+KS+KL A+ L + DG RL R LW++LRSF+T L+S+ + M+ + D +T TA++F A D G SV F +FA+WYT GGY +PWLELLD+ KW
Sbjct: 117 ELASGFTVLCGGRKSDKLEFAFDLIDDDK----DG------RLSRRGLWKYLRSFLTVLMSISSASANMTEGHIYSAIDSASTWATAQVFG--AEQDKGLGNNDNSSKRSVCFDDFAEWYTQGGYGSIPWLELLDLKKW 243
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: A0A7S3Y3W7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3W7_HETAK) HSP 1 Score: 89.0 bits (219), Expect = 5.990e-19 Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 1
Query: 7 VPLAEFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTALLSVCMTNRMSP-QQLQRVADDGATDLTARIF-------AEAAPS---DSGSVSFAEFADWYTAGGYEHMPWLELLDVNKW 402
V + EF GF++ G KS KL+ A++L E S L R +WRF RS ++ L ++C + P ++LQ DDGA TAR F A AAP D +SF + A WYT GGY+ PWLELLD+ KW
Sbjct: 38 VDVLEFIAGFVLFCAGSKSVKLAYAFELLDEQSLGY----------LTRRGVWRFFRSILSMLAALCSSLLDVPTEELQARVDDGAVWTTARAFSYRGPPAAAAAPERERDPNRLSFDDLAAWYTGGGYQVCPWLELLDLRKW 170
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: A0A7S2RNN1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RNN1_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 7.490e-19 Identity = 46/137 (33.58%), Postives = 81/137 (59.12%), Query Frame = 1
Query: 4 VVPLAEFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTAL--LSVCMTNRMSPQQLQRVADDGATDLTARIFAEAAPSDSGSVSFAEFADWYTAGGYEHMPWLELLDVNKWDA 408
+VP ++ C+G +VLG+G KS+KL++AW LF GD T+ ++ + + R+L SF+T LS + + ++ + D ++ + +++ + S ++SF +FA WYT GG+E +PWLELL ++KW
Sbjct: 1157 LVPFSDICSGLLVLGKGSKSDKLALAWGLF-------GD---TKTNKMNKANFSRYLASFLTIFFALSEEVCEGLPAKEGWDIVDQSISEFSEQVYEDLELSPRDTISFEDFATWYTEGGHEIIPWLELLCLDKWST 1283
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Match: A0A7S2K2V1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2V1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.330e-18 Identity = 57/132 (43.18%), Postives = 73/132 (55.30%), Query Frame = 1
Query: 7 VPLAEFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLERVHLWRFLRSFVTALLSVCMTNRMSPQQLQRVADDGATDLTARIFAEAAPSDSGSVSFAEFADWYTAGGYEHMPWLELLDVNKW 402
VP EF GF VL GKKS+KL A+ LF +G+ + R + +LRSFVT L V TN S + D ++ T +IF + + SG +SF EFA+WYT GGY MPWLELLD+ KW
Sbjct: 568 VPAEEFACGFSVLCGGKKSDKLECAFDLF---------DRDHDGKLMLR-EVTLYLRSFVTIFLCVSNTNNHSGGIPFDIVDGASSWATKKIFDDLSLP-SGLLSFDEFANWYTQGGYGCMPWLELLDLRKW 688 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120559.4234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120559.4234.1 >prot_M-pyrifera_M_contig120559.4234.1 ID=prot_M-pyrifera_M_contig120559.4234.1|Name=mRNA_M-pyrifera_M_contig120559.4234.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp GVVPLAEFCTGFMVLGEGKKSEKLSVAWQLFAEASRASGDGTPTEGERLEback to top mRNA from alignment at M-pyrifera_M_contig120559:17..427+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120559.4234.1 ID=mRNA_M-pyrifera_M_contig120559.4234.1|Name=mRNA_M-pyrifera_M_contig120559.4234.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=411bp|location=Sequence derived from alignment at M-pyrifera_M_contig120559:17..427+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120559:17..427+ >mRNA_M-pyrifera_M_contig120559.4234.1 ID=mRNA_M-pyrifera_M_contig120559.4234.1|Name=mRNA_M-pyrifera_M_contig120559.4234.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig120559:17..427+ (Macrocystis pyrifera P11B4 male)back to top |