mRNA_M-pyrifera_M_contig120378.4201.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: A0A3M6UV69_POCDA (Transmembrane ascorbate-dependent reductase CYB561 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UV69_POCDA) HSP 1 Score: 59.7 bits (143), Expect = 5.770e-9 Identity = 24/65 (36.92%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 4 VPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSG 198
+P++ ++H + G+ST++L+SCQL+FG V F P++P ++A + +H G+ +F MV+G+ G
Sbjct: 117 IPNLYSLHSWCGLSTIILFSCQLLFGFVSFLFPKLPDSLRAAYLKVHVFFGMFIFMMVIGTALIG 181
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: A0A8J6FU19_MICOH (Plasma membrane ascorbate-dependent reductase CYBRD1 n=1 Tax=Microtus ochrogaster TaxID=79684 RepID=A0A8J6FU19_MICOH) HSP 1 Score: 60.1 bits (144), Expect = 6.960e-9 Identity = 23/68 (33.82%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 1 SVPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSGFT 204
S+PH+ ++H ++G++ ++LY QL+ G ++F +P P ++AV++P+H +G++LF V+ ++ G T
Sbjct: 210 SIPHMYSLHSWVGLTAVILYVLQLVLGFLIFLLPWAPPSLRAVIMPVHVYSGLLLFGTVIATVLMGIT 277
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: A0A1U7Q329_MESAU (Plasma membrane ascorbate-dependent reductase CYBRD1 n=12 Tax=Cricetidae TaxID=337677 RepID=A0A1U7Q329_MESAU) HSP 1 Score: 59.3 bits (142), Expect = 1.040e-8 Identity = 23/68 (33.82%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 1 SVPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSGFT 204
S+PH+ ++H ++G++ ++LY QL+ G ++F +P P ++AV++P+H +G++LF V+ ++ G T
Sbjct: 110 SIPHMYSLHSWVGLTAVILYVQQLVLGFLIFLLPWAPLSLRAVVMPIHVYSGLLLFGTVIATVLMGVT 177
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: A0A8C6RWD8_NANGA (Plasma membrane ascorbate-dependent reductase CYBRD1 n=1 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6RWD8_NANGA) HSP 1 Score: 59.3 bits (142), Expect = 1.060e-8 Identity = 23/67 (34.33%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 4 VPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSGFT 204
+PH+ ++H ++G++ ++LY QL+ GL +F +P P ++AV++P+H +G++LF V+ ++ G T
Sbjct: 113 IPHMYSLHSWVGLTAVILYVLQLVLGLFIFLLPWAPLSLRAVVMPIHVYSGLLLFGTVIATVLMGVT 179
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: A0A2B4SD89_STYPI (Transmembrane ascorbate-dependent reductase CYB561 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SD89_STYPI) HSP 1 Score: 58.2 bits (139), Expect = 2.110e-8 Identity = 24/65 (36.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 4 VPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSG 198
+P++ ++H + G+ T++L+SCQL+FG V F P++P ++AV + +H GV +F M +G+ G
Sbjct: 117 IPNLYSLHSWCGLLTIILFSCQLLFGFVSFLFPKLPEGLRAVYLKVHVFFGVFIFMMAIGTALLG 181
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: CYBR1_MOUSE (Plasma membrane ascorbate-dependent reductase CYBRD1 n=11 Tax=Tetrapoda TaxID=32523 RepID=CYBR1_MOUSE) HSP 1 Score: 58.2 bits (139), Expect = 2.820e-8 Identity = 24/67 (35.82%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 4 VPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSGFT 204
VPH+ ++H ++G++ L+LY QL+ G VF +P P ++A+++P+H +G++LF V+ ++ G T
Sbjct: 113 VPHMYSLHSWVGLTALILYIQQLVVGFFVFLLPWAPPSLRAIVMPIHVYSGLLLFGTVIATVLMGVT 179
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: A0A1I8AJR7_9BILA (Cytochrome b561 domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AJR7_9BILA) HSP 1 Score: 57.4 bits (137), Expect = 4.440e-8 Identity = 25/65 (38.46%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 4 VPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSG 198
+P++ ++H ++GIST+VL+ Q +FG + + P +P + +A+ +P HR G+ LF M LGS G
Sbjct: 118 IPNLMSLHSWIGISTVVLFCLQFLFGFITYLKPGLPMQYRALFMPGHRLGGIALFVMALGSALMG 182
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: A0A6J2WC06_CHACN (Plasma membrane ascorbate-dependent reductase CYBRD1 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WC06_CHACN) HSP 1 Score: 57.0 bits (136), Expect = 7.000e-8 Identity = 22/67 (32.84%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 4 VPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSGFT 204
+P++ ++H ++G++ ++LYS QL+ GL+V+ +P P ++A ++PLH +G+++F V+ + G T
Sbjct: 111 IPNMYSLHSWVGLAAVILYSLQLVLGLLVYLVPITPVYVRAALMPLHVYSGLVIFVSVIAAALMGIT 177
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: A0A250XXJ6_CASCN (Plasma membrane ascorbate-dependent reductase CYBRD1 n=2 Tax=Castor canadensis TaxID=51338 RepID=A0A250XXJ6_CASCN) HSP 1 Score: 56.6 bits (135), Expect = 9.820e-8 Identity = 22/68 (32.35%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1 SVPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSGFT 204
S+PH+ ++H ++G++ ++LY QL+ G +F +P P ++A+ +P+H +G++LF V+ ++ G T
Sbjct: 112 SIPHMYSLHSWVGLTVVILYVLQLLLGFFIFLLPWAPLSLRALAMPVHVYSGLLLFGTVIATVLMGVT 179
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Match: UPI00112E805A (cytochrome b reductase 1 isoform X2 n=2 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112E805A) HSP 1 Score: 56.2 bits (134), Expect = 1.110e-7 Identity = 20/68 (29.41%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 1 SVPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGTGVMLFCMVLGSITSGFT 204
++P++ ++H ++G++ ++LY Q++FGL+V+ +P P ++A ++PLH+ +G+++F + + G T
Sbjct: 77 NIPNMYSMHSWVGLTAVILYGLQILFGLLVYLLPYAPMSVRAALLPLHKFSGLLIFGSGIATALMGIT 144 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120378.4201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120378.4201.1 >prot_M-pyrifera_M_contig120378.4201.1 ID=prot_M-pyrifera_M_contig120378.4201.1|Name=mRNA_M-pyrifera_M_contig120378.4201.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp SVPHIQAIHEYMGISTLVLYSCQLIFGLVVFAIPQIPAKIKAVMVPLHRGback to top mRNA from alignment at M-pyrifera_M_contig120378:51..435+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120378.4201.1 ID=mRNA_M-pyrifera_M_contig120378.4201.1|Name=mRNA_M-pyrifera_M_contig120378.4201.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=385bp|location=Sequence derived from alignment at M-pyrifera_M_contig120378:51..435+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120378:51..435+ >mRNA_M-pyrifera_M_contig120378.4201.1 ID=mRNA_M-pyrifera_M_contig120378.4201.1|Name=mRNA_M-pyrifera_M_contig120378.4201.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig120378:51..435+ (Macrocystis pyrifera P11B4 male)back to top |