mRNA_M-pyrifera_M_contig119808.4073.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: A0A397TQ03_9GLOM (Ribonucleases P/MRP protein subunit POP1-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TQ03_9GLOM) HSP 1 Score: 62.0 bits (149), Expect = 3.370e-9 Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKNLEQRRLRSGAHWLETHVWARKRMHLTLCWGWQLVRLP 273
P+H+RRRAASHNV R+P +RK+A+ E E KK+ +++ ++P + E +R + WLETH+W KRM +T WG++LV P
Sbjct: 82 PRHLRRRAASHNVKRLPVRLRKKAMDEMESDN----TALKKQSRRKRRRPGSLSTEYKRRQGNKKWLETHMWHSKRMKMTDKWGYKLVEHP 168
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: A0A2N1NKR0_9GLOM (POP1-domain-containing protein n=9 Tax=Rhizophagus TaxID=1129544 RepID=A0A2N1NKR0_9GLOM) HSP 1 Score: 60.8 bits (146), Expect = 8.580e-9 Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKNLEQRRLRSGAHWLETHVWARKRMHLTLCWGWQLVRLP 273
P+H+RRRAASHNV R+P +RK+AI E E + KK+ +++ ++ + E +R + WLETH+W KRM +T WG++L P
Sbjct: 84 PRHLRRRAASHNVKRLPVRLRKKAIDEME----LDNTAPKKQNRRKRRRLGSLSAEYKRRQGNKKWLETHMWHSKRMKMTEIWGYKLAEHP 170
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: UPI0020192CE3 (ribonucleases P/MRP protein subunit POP1 n=1 Tax=Perognathus longimembris pacificus TaxID=214514 RepID=UPI0020192CE3) HSP 1 Score: 60.8 bits (146), Expect = 8.680e-9 Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKNLEQRRLRSGAHWLETHVWARKRMHLTLCWGWQLVRLP 273
P+HMRRRA SHNV R+P +R+ A +E E+A +K K + K + K LE R + WLETH+W KR H+ WG+ L P
Sbjct: 136 PRHMRRRAMSHNVKRLPRRLREMAQKEAEKAVHQKKEHSKNKSHKARRCHLNKTLEFNRRQKKNKWLETHIWHAKRFHMVKKWGYCLGERP 226
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: A0A238FR84_9BASI (BQ2448_7750 protein n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FR84_9BASI) HSP 1 Score: 60.5 bits (145), Expect = 1.180e-8 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKNL-EQRRLRS------------GAHWLETHVWARKRMHLTLCWGWQLVRL 270
P+H+RRRAASHN+ R+P+ +RK+A+ E + K K + KK K L +RRLR G WLETHVW KRMH+T WG++LVRL
Sbjct: 111 PRHLRRRAASHNIRRLPTRLRKRALAEGDNCPPPPKKTPK--DAAKPKKVTRKMLGPRRRLRGRSKAAALLKRQRGKLWLETHVWHAKRMHMTTRWGYRLVRL 211
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: A0A1S8W4Z1_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W4Z1_9FUNG) HSP 1 Score: 60.5 bits (145), Expect = 1.180e-8 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKNLEQRRLRSGAH--WLETHVWARKRMHLTLCWGWQLVRLP 273
P+HMRRRAASHN+ R+P +R++A+ + E+ ++ ++ +KR KK + K+L + L AH WLETHVW KRM + WG++L P
Sbjct: 144 PRHMRRRAASHNIKRLPMNIRRRAMLQMEKDDKPQQIA-----KKRYKKRQAKSLREEFLTRPAHNTWLETHVWHSKRMKMVEKWGYKLADHP 231
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: A0A1S3H3E3_LINUN (ribonucleases P/MRP protein subunit POP1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H3E3_LINUN) HSP 1 Score: 60.5 bits (145), Expect = 1.180e-8 Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKNL--EQRRLRSGAHWLETHVWARKRMHLTLCWGWQLVRLP 273
P+HMRRRAASHN+ R+P +R QA+ E+ AG K + R + R KNL E R + +WLETH+W KR H+ WG+ + P
Sbjct: 128 PRHMRRRAASHNIKRLPRRLRMQAM------AEIESAGKKPKTPSRYHRRRPKNLMAEYNRRQRKQNWLETHIWHAKRFHMIEKWGYVIPHFP 214
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: A0A2R2MRZ3_LINUN (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MRZ3_LINUN) HSP 1 Score: 60.5 bits (145), Expect = 1.200e-8 Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKNL--EQRRLRSGAHWLETHVWARKRMHLTLCWGWQLVRLP 273
P+HMRRRAASHN+ R+P +R QA+ E+ AG K + R + R KNL E R + +WLETH+W KR H+ WG+ + P
Sbjct: 99 PRHMRRRAASHNIKRLPRRLRMQAM------AEIESAGKKPKTPSRYHRRRPKNLMAEYNRRQRKQNWLETHIWHAKRFHMIEKWGYVIPHFP 185
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: A0A2Z6QBK7_9GLOM (POP1-domain-containing protein n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QBK7_9GLOM) HSP 1 Score: 60.1 bits (144), Expect = 1.600e-8 Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKNL--EQRRLRSGAHWLETHVWARKRMHLTLCWGWQLVRLP 273
P+H+RRRAASHNV R+P +RK+A +EEM ++Q R K+ R +L E +R + WLETH+W KRM +T WG++L P
Sbjct: 84 PRHLRRRAASHNVKRLPVRLRKKA------SEEMELDNTTSKKQNRRKRRRLGSLSAEYKRRQGNKKWLETHMWHSKRMKMTEIWGYKLAEHP 170
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: A0A4P9XUE4_9FUNG (NUC188 domain-containing protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XUE4_9FUNG) HSP 1 Score: 59.7 bits (143), Expect = 2.170e-8 Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRT--KKPREKNLEQRRLRSGAHWLETHVWARKRMHLTLCWGWQLVRLP 273
P+H+RRRAASHN R+P+ VR +A+RE + AG K QQ R ++P E RR + WLETH+W KRM +T WG++L P
Sbjct: 29 PRHLRRRAASHNPKRLPARVRGKALREASARRQC--AGMAKHQQSRRARRRPGAIAAEYRRRQEEKLWLETHIWHTKRMKMTDIWGYRLAEHP 119
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Match: A0A397UCQ1_9GLOM (Uncharacterized protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UCQ1_9GLOM) HSP 1 Score: 58.9 bits (141), Expect = 4.100e-8 Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 1 PKHMRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKNL--EQRRLRSGAHWLETHVWARKRMHLTLCWGWQL 261
P+H+RRRAASHNV R+P +RKQA AEEM K ++ R KK R +L E +R + WLETH+W KRM + WG +L
Sbjct: 85 PRHLRRRAASHNVKRLPVRLRKQA------AEEMAKYNTAPKKPNRRKKRRPGSLADEYKRRQGTKRWLETHIWHAKRMKMIELWGHKL 167 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119808.4073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119808.4073.1 >prot_M-pyrifera_M_contig119808.4073.1 ID=prot_M-pyrifera_M_contig119808.4073.1|Name=mRNA_M-pyrifera_M_contig119808.4073.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp MRRRAASHNVNRVPSAVRKQAIRERERAEEMRKAGDKKRQQKRTKKPREKback to top mRNA from alignment at M-pyrifera_M_contig119808:2..274+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119808.4073.1 ID=mRNA_M-pyrifera_M_contig119808.4073.1|Name=mRNA_M-pyrifera_M_contig119808.4073.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=273bp|location=Sequence derived from alignment at M-pyrifera_M_contig119808:2..274+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119808:2..274+ >mRNA_M-pyrifera_M_contig119808.4073.1 ID=mRNA_M-pyrifera_M_contig119808.4073.1|Name=mRNA_M-pyrifera_M_contig119808.4073.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig119808:2..274+ (Macrocystis pyrifera P11B4 male)back to top |