mRNA_M-pyrifera_M_contig119295.3974.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A7W8FZ16_9GAMM (Uncharacterized protein n=1 Tax=Chiayiivirga flava TaxID=659595 RepID=A0A7W8FZ16_9GAMM) HSP 1 Score: 110 bits (276), Expect = 4.640e-26 Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVA-VDALDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAPEF 324
N+AP L TFT+ ENSA GT VGS + TD D GQTLTY++ GNTG F +D +TG + VA ALDFE + LT DDG PALSATAT+ ++L DVNEAP+
Sbjct: 260 NQAPTLDPQTFTLAENSAAGTAVGS-IAGTDPDAGQTLTYAITGGNTGNAFAIDAATGAISVANAAALDFEAGATFALTVTATDDGDPALSATATITIDLDDVNEAPQI 367
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A7L4ZXL2_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Hymenobacter busanensis TaxID=2607656 RepID=A0A7L4ZXL2_9BACT) HSP 1 Score: 109 bits (272), Expect = 1.600e-25 Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAPEF 324
N AP + T TV EN+A G VG+ + A+D D GQTLTYS+ AGNTGG F ++ S+GQ+ VA A L+FE Y LT QV D+G+P+ SA+ATV VNL +VNEAP
Sbjct: 403 NNAPTISSQTRTVAENAANGNNVGAVVTASDPDAGQTLTYSITAGNTGGAFAINASSGQITVANSAQLNFEATPSYALTVQVADNGIPSRSASATVTVNLTNVNEAPSI 511
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: UPI0019E3678B (Cadherin domain-containing protein n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019E3678B) HSP 1 Score: 106 bits (264), Expect = 1.930e-24 Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 318
NEAPV ATFT+DEN A G+ VG+ +ATD D G TLTYS++AGN G F +D +TG + VA A LDFE + LT +V D+G P L TAT+ +NL D+NEAP
Sbjct: 1124 NEAPVANDATFTIDENLAAGSFVGTA-IATDEDFGDTLTYSIIAGNDNGAFAIDPATGDITVANSAALDFETTPTFALTVRVRDNGNPRLEDTATITINLNDLNEAP 1229
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A7C6VZJ3_9GAMM (Tandem-95 repeat protein n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7C6VZJ3_9GAMM) HSP 1 Score: 105 bits (263), Expect = 2.620e-24 Identity = 56/107 (52.34%), Postives = 72/107 (67.29%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 318
N PV+ A F++ ENSA G VGSP+ TD D GQT T+++ GNTG F ++ +TGQ+ VA A LDFE ++LT QV DDG PA S +ATV +NL +VNEAP
Sbjct: 698 NSPPVVDAANFSIAENSADGASVGSPITFTDPDTGQTHTFAITGGNTGDAFAINANTGQITVASGAALDFETTPTFSLTVQVTDDGTPAQSGSATVTINLTNVNEAP 804
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: UPI0019F10434 (Cadherin domain-containing protein n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019F10434) HSP 1 Score: 104 bits (259), Expect = 9.050e-24 Identity = 61/107 (57.01%), Postives = 73/107 (68.22%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 318
NEAPVL TF+++ENS V T+VG L+A D D GQTLTYS+ AGN G F +D +TG + VA A LDFE T + LT V DDG P LS TA VV+N+ DVNE P
Sbjct: 1127 NEAPVLADRTFSLNENSPVDTVVGQ-LMAVDSDLGQTLTYSITAGNESGAFAIDPATGIITVADSAPLDFETTTTFQLTISVTDDGEPPLSDTADVVINILDVNEPP 1232
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A7L4ZVQ8_9BACT (Cadherin domain-containing protein n=1 Tax=Hymenobacter busanensis TaxID=2607656 RepID=A0A7L4ZVQ8_9BACT) HSP 1 Score: 102 bits (254), Expect = 4.280e-23 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNE 312
N PV+ TF++ ENS T+VG+ + A+D D GQTLTYSL AGNTGG F ++ STGQLRVA A LD+E T + LT QV D+G P+ +A+AT+ VNL +V++
Sbjct: 476 NANPVIAAQTFSIAENSVNNTVVGT-VAASDPDAGQTLTYSLTAGNTGGAFSINSSTGQLRVANSAALDYETTTSFALTVQVADNGSPSKNASATITVNLTNVDD 579
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A482UPP8_9ARCH (Cadherin repeat domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPP8_9ARCH) HSP 1 Score: 100 bits (250), Expect = 1.490e-22 Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDALDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 318
N+ P++ + ++ ENSAVG VG+P+V TD D Q L YS+ +GN FE++ STGQ+RVA LDFE RT Y L+ Q D+G+ LSA TV +++ DV EAP
Sbjct: 1102 NDPPIMPDYSRSIAENSAVGANVGAPVVGTDTDAAQVLAYSISSGNVDDTFEINSSTGQVRVARALLDFETRTRYVLSVQCTDNGMGRLSAVGTVTIDVTDVGEAP 1207
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: R7UW24_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UW24_CAPTE) HSP 1 Score: 99.4 bits (246), Expect = 3.970e-22 Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAV-GTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDALDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 318
N+AP L A+F+V+EN A G++V + ATDVD GQ+ TYS+++GN G F +D +TG++ V V LD E +Y+LT QV DDG PALS TATV +++ D+NEAP
Sbjct: 93 NDAPELSDASFSVNENVASDGSIVLGTMTATDVDVGQSKTYSILSGNDDGHFAIDSNTGEISV-VGNLDHEGTAQYSLTVQVTDDGSPALSDTATVTIDVNDINEAP 198
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: UPI001B305C62 (cadherin domain-containing protein n=1 Tax=Hymenobacter terricola TaxID=2819236 RepID=UPI001B305C62) HSP 1 Score: 99.4 bits (246), Expect = 5.120e-22 Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 318
N PV+ +F++ ENSA T+VG+ + A+D D GQTLTY++ AGNTG F ++ +TGQL VA A LDFE + LT +V D+G P L+ + TV VNL +VNEAP
Sbjct: 575 NRPPVIAAQSFSLAENSAAATVVGT-VAASDPDAGQTLTYAITAGNTGTAFAINATTGQLTVATPAALDFETTPSFALTVRVTDNGTPVLNTSNTVTVNLTNVNEAP 680
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A1M6LVH8_9BACT (Fibronectin type III domain-containing protein n=1 Tax=Rubritalea squalenifaciens DSM 18772 TaxID=1123071 RepID=A0A1M6LVH8_9BACT) HSP 1 Score: 99.4 bits (246), Expect = 5.150e-22 Identity = 52/106 (49.06%), Postives = 77/106 (72.64%), Query Frame = 1
Query: 1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDALDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 318
N APV+ G +F++ ENS +GT+VG+ +VA D D GQ+L+Y++ AGNTGG F V+ TG++ ALD+E+ ++Y L+ +V D G+ LS TA++ VN+ DVNEAP
Sbjct: 1322 NSAPVIAGQSFSIAENSTIGTVVGT-IVAADPDQGQSLSYAITAGNTGGEFTVNSGTGEITTTT-ALDYEKNSQYVLSVEVTDAGL--LSDTASITVNVNDVNEAP 1423 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119295.3974.1 >prot_M-pyrifera_M_contig119295.3974.1 ID=prot_M-pyrifera_M_contig119295.3974.1|Name=mRNA_M-pyrifera_M_contig119295.3974.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVback to top mRNA from alignment at M-pyrifera_M_contig119295:11..334- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119295.3974.1 ID=mRNA_M-pyrifera_M_contig119295.3974.1|Name=mRNA_M-pyrifera_M_contig119295.3974.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig119295:11..334- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119295:11..334- >mRNA_M-pyrifera_M_contig119295.3974.1 ID=mRNA_M-pyrifera_M_contig119295.3974.1|Name=mRNA_M-pyrifera_M_contig119295.3974.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig119295:11..334- (Macrocystis pyrifera P11B4 male)back to top |