mRNA_M-pyrifera_M_contig119168.3947.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: UPI0019B70EB0 (Uncharacterized protein n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI0019B70EB0) HSP 1 Score: 64.7 bits (156), Expect = 1.810e-11 Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 19 LNKLLDALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMAIL 204
L KLL A V L+ L+LP PLL W+AFWLL VNWVKLR V++ GG IGVVLI L+ +L
Sbjct: 8 LQKLLAASWDVVISLLVLILPWTPLLAWVAFWLLAVNWVKLRDVMIRGGWIGVVLIGLVMVL 69
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: A0A3E0Q8T0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q8T0_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 2.430e-11 Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1 MELFFWLNKLLDALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMAIL 204
MEL L LL A+L V A L + + P PL+ W+AFW L VNWV LR+ LLSGG IG+VLI LM IL
Sbjct: 1 MELLESLLNLLVAILEVLAALAKTIAPWWPLIAWVAFWSLAVNWVSLRKTLLSGGWIGLVLIGLMMIL 68
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: A0A1P8WCB8_9PLAN (Uncharacterized protein n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WCB8_9PLAN) HSP 1 Score: 60.1 bits (144), Expect = 9.230e-10 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 4 ELFFWLNKLLDALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMAI 201
ELF L + +LL V V+++LP +PLL WIAFW L VNWVK +L GG IGV+L+M +A+
Sbjct: 6 ELFHSLVNVFWSLLDVVVAFVKVILPWLPLLAWIAFWSLAVNWVKTFDILRRGGFIGVLLLMFVAV 71
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: A0A517Z5U2_9PLAN (Uncharacterized protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z5U2_9PLAN) HSP 1 Score: 58.5 bits (140), Expect = 3.000e-9 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1 MELFFWLNKLLDALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMAIL 204
MEL L ++ A++ + L + P PL+ WIAFW L V+WVKLR +L SGG+IGV+LI L+A+L
Sbjct: 1 MELLTSLWNVVVAVVDLLVTLASTLWPWAPLIAWIAFWTLAVDWVKLRSILWSGGIIGVLLIALVAVL 68
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: A0A5C5X358_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X358_9PLAN) HSP 1 Score: 57.4 bits (137), Expect = 8.950e-9 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1 MELFFWLNKLLDALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMAIL 204
MEL L ++ A+ ++ LV V P +PLL WIAFWL VNW +L VL+ GG+IGVVLI L+A+L
Sbjct: 1 MELLHSLWAVVVAVANLLVALVIFVAPWVPLLAWIAFWLCAVNWRRLYPVLMKGGMIGVVLIGLIAML 68
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: A0A517QSV4_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QSV4_9PLAN) HSP 1 Score: 57.0 bits (136), Expect = 1.170e-8 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 37 ALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMAIL 204
AL + +LVQ V P +PLL WIAFWL VNW +L +L GG+IGV+L LMA+L
Sbjct: 13 ALGQLVVDLVQFVSPWVPLLAWIAFWLCAVNWRQLYPILEKGGIIGVILTALMAVL 68
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: UPI000299F389 (hypothetical protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI000299F389) HSP 1 Score: 55.8 bits (133), Expect = 5.570e-8 Identity = 35/62 (56.45%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 19 LNKLLDALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMAIL 204
L LL A V L+ LV+P PL+ W+AFWLL VNW KL VL GG IGV LI LM IL
Sbjct: 8 LQNLLVAGWAVVVSLLGLVVPWAPLIAWVAFWLLAVNWEKLYPVLAKGGAIGVFLIGLMMIL 69
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: A0A836RJC9_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836RJC9_9PLAN) HSP 1 Score: 54.3 bits (129), Expect = 1.500e-7 Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 19 LNKLLDALLHVGAELVQLVL--PLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMAIL 204
L +L A+ HV ++ +V P++P+L+W+AFWL V+WV+LR +LL GG + V+LI LM IL
Sbjct: 12 LIQLFLAVWHVAIGILSMVATPPVLPMLLWVAFWLFAVDWVRLRTILLKGGWVAVLLIGLMTIL 75
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: A0A352L3G8_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A352L3G8_9PLAN) HSP 1 Score: 53.5 bits (127), Expect = 4.460e-7 Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 4 ELFFWLNKLLDALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMAIL 204
LF L + ALL++ +V +++P +PLL W+AF+ L VNW K +L GG++GV+L+M++A+L
Sbjct: 29 NLFTSLVDVFQALLNLVVSVVLVLIPWLPLLAWLAFFSLAVNWAKAYPILRRGGILGVLLLMVVAVL 95
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Match: A0A7C4QN45_9PLAN (Uncharacterized protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4QN45_9PLAN) HSP 1 Score: 53.1 bits (126), Expect = 5.640e-7 Identity = 28/60 (46.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 19 LNKLLDALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVLLSGGVIGVVLIMLMA 198
L +LL AL + ++ L++P PL W+AFWL V+WVKLR++++ GG IG+VL+ +MA
Sbjct: 8 LVQLLLALWDLVVAVLALLVPWTPLAAWVAFWLYAVDWVKLREIIVRGGWIGLVLLGVMA 67 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119168.3947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119168.3947.1 >prot_M-pyrifera_M_contig119168.3947.1 ID=prot_M-pyrifera_M_contig119168.3947.1|Name=mRNA_M-pyrifera_M_contig119168.3947.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp MELFFWLNKLLDALLHVGAELVQLVLPLIPLLVWIAFWLLGVNWVKLRQVback to top mRNA from alignment at M-pyrifera_M_contig119168:6..209- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119168.3947.1 ID=mRNA_M-pyrifera_M_contig119168.3947.1|Name=mRNA_M-pyrifera_M_contig119168.3947.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=204bp|location=Sequence derived from alignment at M-pyrifera_M_contig119168:6..209- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119168:6..209- >mRNA_M-pyrifera_M_contig119168.3947.1 ID=mRNA_M-pyrifera_M_contig119168.3947.1|Name=mRNA_M-pyrifera_M_contig119168.3947.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig119168:6..209- (Macrocystis pyrifera P11B4 male)back to top |