mRNA_M-pyrifera_M_contig118359.3798.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118359.3798.1 vs. uniprot
Match: A0A0R5K527_9VIRU (Putative minor capsid protein n=1 Tax=Qinghai Lake virophage TaxID=1516115 RepID=A0A0R5K527_9VIRU) HSP 1 Score: 148 bits (373), Expect = 1.110e-39 Identity = 79/176 (44.89%), Postives = 117/176 (66.48%), Query Frame = 1
Query: 22 LNPLIEVYFNPTLYAMFNSLPIQKKYLIDAGGNIIGPPNNPPYYQIMIDNFNGAKTIQGLFGQQTE-RFIETPQQYSTISEWSPVSSLVFTSSTLPVVVNQLSNPKLYQNNNLIQLSRQGNSFATIITDLVTDEQSYRGSLLYYPTAEYRWISLTTSQPISQIDIQVYWKSKVGKL 546
+NP+I ++FN L+A+FNS ID G +I N +QI+ID++ G +TIQ +G E + +T Q++STI W+PVSS+VFTS+T+P+V NQLS P ++ + ++ +FA IITDL T++Q Y+ LLY PTAEYR I LT ++P++ IDI+VYW+ K+G L
Sbjct: 205 VNPIINIFFNKPLFALFNSF-----LNIDFGVSITNGKN----HQIVIDSYLGTQTIQFPYGLDPELEYTQTFQEFSTIDTWTPVSSIVFTSNTIPIVSNQLSAPLIFNDGQIVVGDGNNCNFAQIITDLETNQQVYKPQLLYVPTAEYRRIDLTGNRPLTNIDIEVYWRDKLGGL 371
BLAST of mRNA_M-pyrifera_M_contig118359.3798.1 vs. uniprot
Match: A0A0A0RJU7_9VIRU (Putative minor capsid protein n=1 Tax=Yellowstone Lake virophage 6 TaxID=1557034 RepID=A0A0A0RJU7_9VIRU) HSP 1 Score: 92.4 bits (228), Expect = 7.070e-19 Identity = 61/172 (35.47%), Postives = 88/172 (51.16%), Query Frame = 1
Query: 34 IEVYFNPTLYAMFNSLPIQKKYLIDAGGNIIGPPNNPPYYQIMIDNFNGAKTIQ-GLFGQQTERFIETPQQYSTISEWSPVSSLVFTSSTLPVVVNQLSNPKLYQNNNLIQLSRQGNSFATIITDLVTDEQSYRGSLLYYPTAEYRWISLTTSQPISQIDIQVYWKSKVGKL 546
I+VYFN L +F+S P DA +Q+ I++F+ A FG + Q++STIS W+PV S+V S+TLP+V N P L N Q S N + +ITD V D Y+ + Y P+ EYR +SL +PI+ IDI V +K ++G+L
Sbjct: 190 IKVYFNQALSQLFSSFPFTINSFNDAYNR---------NFQLQINSFSVANQADYPSFGASDFTAYQLFQEFSTISAWNPVLSIVLVSNTLPIVPNNEGVPSLIVNGIYQQQSGNNNIQSQVITDFVADG-IYKPIITYIPSGEYRRLSLVGDKPINNIDITVMYKDRLGRL 351
BLAST of mRNA_M-pyrifera_M_contig118359.3798.1 vs. uniprot
Match: A0A6C0EW23_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EW23_9ZZZZ) HSP 1 Score: 73.9 bits (180), Expect = 3.150e-12 Identity = 60/179 (33.52%), Postives = 88/179 (49.16%), Query Frame = 1
Query: 34 IEVYFNPTLYAMFNSLPIQKKYLIDAGGNIIGPPNNPPYYQIMIDNFNGAKTIQ--GLFG-QQTERFIETPQQYSTISEWSPVSSLVFTSSTLPVVVNQLSNPKLYQNNNLIQLSRQGNSFATIITDLVTDEQS---YRGSLLYYPTAEYRWISLT--TSQPISQIDIQVYWKSKVGKL 546
I +Y N LY + + Q Y GP + Y+ I K I+ LF T I+ Q+YS+ + +SP+SS+VF +S +PV + + P +Y N L GN+ ++ITD + + + Y GSL Y PTAEYR+ISL S +S ID+ V+WK L
Sbjct: 196 ISIYTNTALYTLMSGF--QAFYY--------GPDLSGKNYKFKI-----TKDIRELNLFKIDDTYSVIQLYQEYSSGALFSPISSIVFCTSMIPVQPSNSTTPLIY--NGTGSLVTTGNNITSMITDFQSQDNNGYGYCGSLSYVPTAEYRFISLNQGASHKLSNIDLMVFWKDAYANL 357
BLAST of mRNA_M-pyrifera_M_contig118359.3798.1 vs. uniprot
Match: F2Y0L4_9VIRU (Putative minor capsid protein n=1 Tax=Organic Lake virophage TaxID=938080 RepID=F2Y0L4_9VIRU) HSP 1 Score: 68.6 bits (166), Expect = 2.500e-10 Identity = 54/194 (27.84%), Postives = 85/194 (43.81%), Query Frame = 1
Query: 1 TANQPTPLNPLIEVYFNPTLYAMFNSLPIQKKYLIDAGGNIIGPPNNPPYYQIMIDNFNGAKTIQ-------GLFGQQTERFIETPQQYSTISEWSPVSSLVFTSSTLPVVVNQLSNPKLYQN--------NNLIQLSRQGNSFATIITDLVTDEQSYRGSLLYYPTAEYRWISLTTSQPISQIDIQVYWKSKV 537
T N TP N ++ +Y N LY +FNSLP + N Y+I + +F Q G +I Q YST+ WSPV S+V TS+T+PV + S +QN +N+++L T I ++ + YP RWI++ +S I+I++Y++SK+
Sbjct: 186 TFNDDTP-NDVVNIYLNKPLYRLFNSLPFTHELTTFETMTTKVTANA---YKIKMSDFGNVAENQVFPPQSDGTIASVKVNYISVLQDYSTLDTWSPVESIVVTSNTIPVQSSNTSANHSFQNGSETISGSSNIVELELSDFKAGTPIPGVIYEPS--------YP----RWINMRNQSELSNINIEMYYRSKL 363
BLAST of mRNA_M-pyrifera_M_contig118359.3798.1 vs. uniprot
Match: A0A6G6XMR5_9VIRU (Putative minor capsid protein n=1 Tax=Dishui Lake virophage 3 TaxID=2704066 RepID=A0A6G6XMR5_9VIRU) HSP 1 Score: 65.9 bits (159), Expect = 2.360e-9 Identity = 39/115 (33.91%), Postives = 63/115 (54.78%), Query Frame = 1
Query: 226 IETPQQYSTISEWSPVSSLVFTSSTLPVVVNQLSNPKLYQ-----NNNLIQLSRQGNSFATIITDLVTDEQSYRGS---LLYYPTAEYRWISLTTSQPISQIDIQVYWKSKVGKL 546
I PQ++ST +SP+SSLVF++S LPV LS P ++ ++ ++ S N A ++TD + S + Y PTAEYR + L + P++ +++ V+WK K L
Sbjct: 306 IIVPQEHSTTILFSPISSLVFSTSLLPVQNTLLSKPAIFNFYDGVTSSNLRSSGNNNVTAPVLTDFELQGATGTSSQTRITYTPTAEYRMLDLRGTTPVNAVEVSVFWKDKFSGL 420
BLAST of mRNA_M-pyrifera_M_contig118359.3798.1 vs. uniprot
Match: A0A0A0RK57_9VIRU (Putative minor capsid protein n=1 Tax=Yellowstone Lake virophage 5 TaxID=1557033 RepID=A0A0A0RK57_9VIRU) HSP 1 Score: 64.7 bits (156), Expect = 6.050e-9 Identity = 61/199 (30.65%), Postives = 87/199 (43.72%), Query Frame = 1
Query: 13 PTPLNPLIEVYFNPTLYAMF-NSLPIQKKYL--IDAGGNIIGPPNNPPYY-QIMIDNFNGAKTIQG-------LFGQQTERFIETPQQYSTISE-WSPVSSLVFTSSTLPVVVNQLSNPKLYQNNNLIQLSRQGNS-------FATIITDLV----TDEQSYRGSLLYYPTAEYRWISLTTS-QPISQIDIQVYWKSKV 537
P +P ++FN ++ +F N L L ID + + P P Y +I N N + + R+ Q+Y +I WSP+SS+VFTS+ LP+ P ++ + S GNS F IITDL+ YR + Y PTA+YR S Q I IDIQVYWK ++
Sbjct: 253 PALTSPQFRLFFNTNMFGLFTNYLNTYYNTLLPIDGWQDGLTYPVQPGYVNEIQFPNKNYTNVLNHETAAADYVPAPDNVRYWINTQEYKSIDTLWSPISSIVFTSTLLPIKSEATGQPIVFGEQ--LGDSSIGNSAPTSQSAFQPIITDLILPMDNGAHDYRSFVYYAPTAQYRLTDFAPSKQEIRNIDIQVYWKYRL 449 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118359.3798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118359.3798.1 >prot_M-pyrifera_M_contig118359.3798.1 ID=prot_M-pyrifera_M_contig118359.3798.1|Name=mRNA_M-pyrifera_M_contig118359.3798.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp TANQPTPLNPLIEVYFNPTLYAMFNSLPIQKKYLIDAGGNIIGPPNNPPYback to top mRNA from alignment at M-pyrifera_M_contig118359:3..548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118359.3798.1 ID=mRNA_M-pyrifera_M_contig118359.3798.1|Name=mRNA_M-pyrifera_M_contig118359.3798.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig118359:3..548+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118359:3..548+ >mRNA_M-pyrifera_M_contig118359.3798.1 ID=mRNA_M-pyrifera_M_contig118359.3798.1|Name=mRNA_M-pyrifera_M_contig118359.3798.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig118359:3..548+ (Macrocystis pyrifera P11B4 male)back to top |