mRNA_M-pyrifera_M_contig11796.3720.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11796.3720.1 vs. uniprot
Match: A0A6H5KC52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC52_9PHAE) HSP 1 Score: 508 bits (1309), Expect = 2.270e-159 Identity = 374/815 (45.89%), Postives = 451/815 (55.34%), Query Frame = 1
Query: 1 QALAQATKSARGRDANPGAVRGPKLPGLTKATLLQTHIAIMVVSDAFIGLSHADRLALVFTALYDGLPANTXXXXXXXXXXXXXXXXXXXXXXXIATSNASSQRYSIPLAAGGSLPETPGRIVDHATGHXXXXXQPSPTA-SPDTVRSQEGRTPLHDGGD------------SAGXXXXXXXXXXXXXXXXXXXXDSAEDGATAXXXXXXXX------------EAAR------------VAGIESVIGVPPGG-----ERRGGACESR-----RVVRGTVRASHVGVNVEALPVWGGLDAVAGSSLLVDCRTPAQWRADGFEPTPQELWGPARSGHRTLANHPRVKEPAIRSELERIIGESKALREASSQFEHFDRFNTSQAKAGKSKRGGNSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGSDARPHFFHGLGPNARRLFMELCDENRSRLLALMPSMPSVSSKTGDTPAPEPHQHNPAELSSAPSDGSSLPPTLSPRNCSRRKGSRKSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADTLRHAAGA-------FAASGPPPDLDAGIMDRYGVLLGKLVEAATRVQRIRRLGAMPRAARRLRRRQRSALAVQRVFRGHLGRRYAAIWKLISALASTRISAGWRRFVDRRAFLVMLAKARAGATKMQALFRGHVARRYASWCASHYFAARCIQSGVRGFTARCRARALRSV---RAWDLCGLPALLLLQRVVRGFLVRKAFSRRLEEAIRVRVIAPAAGVLQKCWRGKKGREEGALRRRMAAAATEIQ 2274
QALA A KSA+ RDANPGAVRGPK P +T+ T+L+THI+I+VVSDAF GLSHADRLALVFT L++ L A+ + + + +S PL + P + ++ AT + +PTA +PD V G + DG D S G + A XXXXXX E R A + SV V P G E RG + R RV+RG V+AS VG NVE LPVWG LDA+AGSSLLVDCRTPAQWRA+ + PT QELWG ARSGHRTLANHPRVKE ++S +ERII ESK LREA+ +FEHFDRF S A ++K GN PP + PHFFHGLGPNAR+LFMEL ENRSRLLA +S ++ D P ++ AP D +SLP + RN S+ S + XXXXXXXXXXXX XXX FAASGPPPDLDAG++DRYGVLLG+LVEAATR+QR+RRLG +PRAARRLRRRQR+ LAVQRVFRGHLGRRYA++WK+++ LA+TR+SAGWRRF +R FL A+ARAGA +Q G C+AR S+ RA++LCGLPA+LL+QR +RGFLVRKA +RR +EA+RV+VI P+AGVLQKCWRGKKGREEGALRRRM AAA EIQ
Sbjct: 644 QALALAAKSAKERDANPGAVRGPKPPMMTQLTMLETHISILVVSDAFTGLSHADRLALVFTTLHNELAASAHPPP--------------------SLPDVRTNAFSSPLPFSNTPPSS---LLPQAT-----KAKKTPTALAPDAVEEGRGDHSVADGTDGRPNARRGVSVQSPGHHDESNRAGAGRPHGVAVGTGEKSERVVAAGXXXXXXXXXXXXXXXXIEEGGRNDVSNGRGLPVGTASLSSVHPVIPTGGINSQEERGKDGDQRQRRRHRVIRGNVKASFVGPNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETYPPTEQELWGAARSGHRTLANHPRVKEGIVKSTMERIIAESKVLREAAPKFEHFDRFGESNGDADQTK--GNPPPPTTSGGQSDGAGHQPNTNPAVAAPAAT------------------KAGRTHPHFFHGLGPNARKLFMELYTENRSRLLA------PISRRSADVAGPVASSGRHLPVAPAPPDCTSLPSPTTARNGSQLSISWQQXXXXXXXXXXXXXXREKVKSPRSVSGSFAXXXXXXXXXXXXXXXXXXXXXFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRVRRLGGLPRAARRLRRRQRAVLAVQRVFRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRARARAGAIGLQV-----------------------------GTLVSCQARCAWSIGEARAFELCGLPAILLIQRSIRGFLVRKACTRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQ 1375
BLAST of mRNA_M-pyrifera_M_contig11796.3720.1 vs. uniprot
Match: D7FMH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH0_ECTSI) HSP 1 Score: 481 bits (1237), Expect = 5.950e-149 Identity = 354/802 (44.14%), Postives = 419/802 (52.24%), Query Frame = 1
Query: 1 QALAQATKSARGRDANPGAVRGPKLPGLTKATLLQTHIAIMVVSDAFIGLSHADRLALVFTALYDGLPANTXXXXXXXXXXXXXXXXXXXXXXXIATSNASSQRYSIPLAA--------GGSLPETPGRIVDHATGHXXXXXQPSPTASPDTVRSQEGRTPLHDGGDSAGXXXXXXXXXXXXXXXXXXXXDSAEDGATAXXXXXXXXEAARVAGIESVIGVPPGGERR--GGACESRR--VVRGTVRASHVGVNVEALPVWGGLDAVAGSSLLVDCRTPAQWRADGFEPTPQ-----------------------------ELWGPARSGHRTLANHPRVKEPAIRSELERIIGESKALREASSQFEHFDRFNTSQAKAGKSKRGGNSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGSDARPHFFHGLGPNARRLFMELCDENRSRLLALMPSMPSVSSKTGDTPAPEPHQHNPAELSSAPSDGSSLPPTLSPRNCSRRKGSRKSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA---DTLRHAAGAFAASGPPPDLDAGIMDRYGVLLGKLVEAATRVQRIRRLGAMPRAARRLRRRQRSALAVQRVFRGHLGRRYAAIWKLISALASTRISAGWRRFVDRRAFLVMLAKARAGATKMQALFRGHVARRYASWCASHYFAARCIQSGVRGFTARCRARALRSVRAWDLCGLPALLLLQRVVRGFLVRKAFSRRLEEAIRVRVIAPAAGVLQKCWRGKKGREEGALRRRMAAAATEIQ 2274
QALA A KSA+ RDANPGAVRGPK PG+T+ T+LQTHI+I+VVSDAF GLSHADRLALVFT L++ L A+ +S S + A GG + D + SP ++ R+ GR H A XXXXXXXX D + + V I + + ERR G + RR V+RG V+AS VG NVE LPVWG LDA+AGSSLLVDCRTPAQWRA+ F PT Q ELWGPARSGHRTLAN+PRVKE A+RS +ERII ESKALREA+ +FEHFDRF S A ++K GN PP + PHFFHGLGPNAR+LFMEL ENRSRLLA +S ++ D P + AP DG+SLP + RN S+ SR+ XXXXXX + +RHAAGAFAASGPPPDLDAG++DRYGVLLG+LVEAATR+QR RRLG +PRAARRL RRQR+ LAVQRVFRGHLGR YA++WK+++ LA+TR+SAGWRRF +R FL A+ARAGA LQR +RGFLVRKA+ RR +EA+RV+VI P+AGVLQKCWRGKKGREEGALRRRM AAA EIQ
Sbjct: 601 QALAIAAKSAKERDANPGAVRGPKPPGMTQLTMLQTHISILVVSDAFTGLSHADRLALVFTTLHNELAASARPPPSLPDNSTNAFSSPLPSSNTPPSSLLSPATKAKKTATALTPDSVEGGRRDPSVADEADDRSNARRGVSVQSPGYHDESKRAAAGRP--HSIRVVAAGGERQVGEEKGSXXXXXXXXGGRNDVSNGGRLPVGTASPSSVHPIIPIGDINSQEERRKDGDRRQRRRHRVIRGNVKASFVGQNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETFPPTQQDRCLVHRQGPGALYVHSRSHINEKEERFEELWGPARSGHRTLANNPRVKEGAVRSTMERIIAESKALREAAPKFEHFDRFGESNGDADQTK--GNPPPPKKSGGESHGAGHQPNTNPSVATPAAT------------------KAGRTHPHFFHGLGPNARKLFMELYTENRSRLLA------PISRRSADVAGPVASSGRHLSAAPAPPDGTSLPSPTTARNGSQLSISRQQQQQLHEKTPPREEGKSPRSVSGSFAAXXXXXXXXXXXENVRHAAGAFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRERRLGGLPRAARRLWRRQRAVLAVQRVFRGHLGRSYASMWKVVAVLAATRLSAGWRRFSTQRKFLAFRARARAGAIG-----------------------------------------------------------LQRSIRGFLVRKAYKRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQ 1315
BLAST of mRNA_M-pyrifera_M_contig11796.3720.1 vs. uniprot
Match: A0A1V9ZBH2_9STRA (Carbon catabolite repressor protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBH2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.180e-8 Identity = 51/144 (35.42%), Postives = 73/144 (50.69%), Query Frame = 1
Query: 1663 AATRVQRIRRLGAMPRAARRLRRRQRSALAVQRVFRGHLGRRYAAIWKLISALASTRISAGWRRFVDRRAFLVMLAKARAGATKMQALFRGHVARRYASWCASHYFAARCIQSGVRGFTARCRARALRSVRAWDLCGLPALLLL 2094
AA ++QR R + RR+ +R R A+ +QRV+RG+L R + L+ A+T I A +R F+ RRA + AK GA +Q +FRGH AR++A W H A R RA+ R L +PA+ LL
Sbjct: 873 AAIKLQRHFRTKLQTKVLRRILKRHRHAITIQRVYRGYLARVFTTELFLVYTFATTHIQATYRSFISRRATKALKAKMIIGAIGLQRIFRGHKARKWALWLRYHVANAXXXXXXXXXXXGRLRAQMFRHAHFKRLHVVPAVKLL 1016 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11796.3720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11796.3720.1 >prot_M-pyrifera_M_contig11796.3720.1 ID=prot_M-pyrifera_M_contig11796.3720.1|Name=mRNA_M-pyrifera_M_contig11796.3720.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=758bp QALAQATKSARGRDANPGAVRGPKLPGLTKATLLQTHIAIMVVSDAFIGLback to top mRNA from alignment at M-pyrifera_M_contig11796:2453..9299- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11796.3720.1 ID=mRNA_M-pyrifera_M_contig11796.3720.1|Name=mRNA_M-pyrifera_M_contig11796.3720.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6847bp|location=Sequence derived from alignment at M-pyrifera_M_contig11796:2453..9299- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11796:2453..9299- >mRNA_M-pyrifera_M_contig11796.3720.1 ID=mRNA_M-pyrifera_M_contig11796.3720.1|Name=mRNA_M-pyrifera_M_contig11796.3720.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4548bp|location=Sequence derived from alignment at M-pyrifera_M_contig11796:2453..9299- (Macrocystis pyrifera P11B4 male)back to top |