prot_M-pyrifera_M_contig11796.3720.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11796.3720.1
Unique Nameprot_M-pyrifera_M_contig11796.3720.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length758
Homology
BLAST of mRNA_M-pyrifera_M_contig11796.3720.1 vs. uniprot
Match: A0A6H5KC52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC52_9PHAE)

HSP 1 Score: 508 bits (1309), Expect = 2.270e-159
Identity = 374/815 (45.89%), Postives = 451/815 (55.34%), Query Frame = 0
Query:    1 QALAQATKSARGRDANPGAVRGPKLPGLTKATLLQTHIAIMVVSDAFIGLSHADRLALVFTALYDGLPANTXXXXXXXXXXXXXXXXXXXXXXXIATSNASSQRYSIPLAAGGSLPETPGRIVDHATGHXXXXXQPSPTA-SPDTVRSQEGRTPLHDGGD------------SAGXXXXXXXXXXXXXXXXXXXXDSAEDGATAXXXXXXXX------------EAAR------------VAGIESVIGVPPGG-----ERRGGACESR-----RVVRGTVRASHVGVNVEALPVWGGLDAVAGSSLLVDCRTPAQWRADGFEPTPQELWGPARSGHRTLANHPRVKEPAIRSELERIIGESKALREASSQFEHFDRFNTSQAKAGKSKRGGNSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGSDARPHFFHGLGPNARRLFMELCDENRSRLLALMPSMPSVSSKTGDTPAPEPHQHNPAELSSAPSDGSSLPPTLSPRNCSRRKGSRKSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADTLRHAAGA-------FAASGPPPDLDAGIMDRYGVLLGKLVEAATRVQRIRRLGAMPRAARRLRRRQRSALAVQRVFRGHLGRRYAAIWKLISALASTRISAGWRRFVDRRAFLVMLAKARAGATKMQALFRGHVARRYASWCASHYFAARCIQSGVRGFTARCRARALRSV---RAWDLCGLPALLLLQRVVRGFLVRKAFSRRLEEAIRVRVIAPAAGVLQKCWRGKKGREEGALRRRMAAAATEIQ 758
            QALA A KSA+ RDANPGAVRGPK P +T+ T+L+THI+I+VVSDAF GLSHADRLALVFT L++ L A+                         +  +  +  +S PL    + P +   ++  AT       + +PTA +PD V    G   + DG D            S G                        +   A  XXXXXX            E  R             A + SV  V P G     E RG   + R     RV+RG V+AS VG NVE LPVWG LDA+AGSSLLVDCRTPAQWRA+ + PT QELWG ARSGHRTLANHPRVKE  ++S +ERII ESK LREA+ +FEHFDRF  S   A ++K  GN PP                                             +     PHFFHGLGPNAR+LFMEL  ENRSRLLA       +S ++ D   P         ++ AP D +SLP   + RN S+   S +   XXXXXXXXXXXX               XXX                  FAASGPPPDLDAG++DRYGVLLG+LVEAATR+QR+RRLG +PRAARRLRRRQR+ LAVQRVFRGHLGRRYA++WK+++ LA+TR+SAGWRRF  +R FL   A+ARAGA  +Q                              G    C+AR   S+   RA++LCGLPA+LL+QR +RGFLVRKA +RR +EA+RV+VI P+AGVLQKCWRGKKGREEGALRRRM AAA EIQ
Sbjct:  644 QALALAAKSAKERDANPGAVRGPKPPMMTQLTMLETHISILVVSDAFTGLSHADRLALVFTTLHNELAASAHPPP--------------------SLPDVRTNAFSSPLPFSNTPPSS---LLPQAT-----KAKKTPTALAPDAVEEGRGDHSVADGTDGRPNARRGVSVQSPGHHDESNRAGAGRPHGVAVGTGEKSERVVAAGXXXXXXXXXXXXXXXXIEEGGRNDVSNGRGLPVGTASLSSVHPVIPTGGINSQEERGKDGDQRQRRRHRVIRGNVKASFVGPNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETYPPTEQELWGAARSGHRTLANHPRVKEGIVKSTMERIIAESKVLREAAPKFEHFDRFGESNGDADQTK--GNPPPPTTSGGQSDGAGHQPNTNPAVAAPAAT------------------KAGRTHPHFFHGLGPNARKLFMELYTENRSRLLA------PISRRSADVAGPVASSGRHLPVAPAPPDCTSLPSPTTARNGSQLSISWQQXXXXXXXXXXXXXXREKVKSPRSVSGSFAXXXXXXXXXXXXXXXXXXXXXFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRVRRLGGLPRAARRLRRRQRAVLAVQRVFRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRARARAGAIGLQV-----------------------------GTLVSCQARCAWSIGEARAFELCGLPAILLIQRSIRGFLVRKACTRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQ 1375          
BLAST of mRNA_M-pyrifera_M_contig11796.3720.1 vs. uniprot
Match: D7FMH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH0_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 5.950e-149
Identity = 354/802 (44.14%), Postives = 419/802 (52.24%), Query Frame = 0
Query:    1 QALAQATKSARGRDANPGAVRGPKLPGLTKATLLQTHIAIMVVSDAFIGLSHADRLALVFTALYDGLPANTXXXXXXXXXXXXXXXXXXXXXXXIATSNASSQRYSIPLAA--------GGSLPETPGRIVDHATGHXXXXXQPSPTASPDTVRSQEGRTPLHDGGDSAGXXXXXXXXXXXXXXXXXXXXDSAEDGATAXXXXXXXXEAARVAGIESVIGVPPGGERR--GGACESRR--VVRGTVRASHVGVNVEALPVWGGLDAVAGSSLLVDCRTPAQWRADGFEPTPQ-----------------------------ELWGPARSGHRTLANHPRVKEPAIRSELERIIGESKALREASSQFEHFDRFNTSQAKAGKSKRGGNSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGSDARPHFFHGLGPNARRLFMELCDENRSRLLALMPSMPSVSSKTGDTPAPEPHQHNPAELSSAPSDGSSLPPTLSPRNCSRRKGSRKSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA---DTLRHAAGAFAASGPPPDLDAGIMDRYGVLLGKLVEAATRVQRIRRLGAMPRAARRLRRRQRSALAVQRVFRGHLGRRYAAIWKLISALASTRISAGWRRFVDRRAFLVMLAKARAGATKMQALFRGHVARRYASWCASHYFAARCIQSGVRGFTARCRARALRSVRAWDLCGLPALLLLQRVVRGFLVRKAFSRRLEEAIRVRVIAPAAGVLQKCWRGKKGREEGALRRRMAAAATEIQ 758
            QALA A KSA+ RDANPGAVRGPK PG+T+ T+LQTHI+I+VVSDAF GLSHADRLALVFT L++ L A+                          +S  S    +   A         GG    +     D  +         SP    ++ R+  GR   H     A             XXXXXXXX    D +            + V  I  +  +    ERR  G   + RR  V+RG V+AS VG NVE LPVWG LDA+AGSSLLVDCRTPAQWRA+ F PT Q                             ELWGPARSGHRTLAN+PRVKE A+RS +ERII ESKALREA+ +FEHFDRF  S   A ++K  GN PP                                             +     PHFFHGLGPNAR+LFMEL  ENRSRLLA       +S ++ D   P          + AP DG+SLP   + RN S+   SR+                           XXXXXX     + +RHAAGAFAASGPPPDLDAG++DRYGVLLG+LVEAATR+QR RRLG +PRAARRL RRQR+ LAVQRVFRGHLGR YA++WK+++ LA+TR+SAGWRRF  +R FL   A+ARAGA                                                             LQR +RGFLVRKA+ RR +EA+RV+VI P+AGVLQKCWRGKKGREEGALRRRM AAA EIQ
Sbjct:  601 QALAIAAKSAKERDANPGAVRGPKPPGMTQLTMLQTHISILVVSDAFTGLSHADRLALVFTTLHNELAASARPPPSLPDNSTNAFSSPLPSSNTPPSSLLSPATKAKKTATALTPDSVEGGRRDPSVADEADDRSNARRGVSVQSPGYHDESKRAAAGRP--HSIRVVAAGGERQVGEEKGSXXXXXXXXGGRNDVSNGGRLPVGTASPSSVHPIIPIGDINSQEERRKDGDRRQRRRHRVIRGNVKASFVGQNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETFPPTQQDRCLVHRQGPGALYVHSRSHINEKEERFEELWGPARSGHRTLANNPRVKEGAVRSTMERIIAESKALREAAPKFEHFDRFGESNGDADQTK--GNPPPPKKSGGESHGAGHQPNTNPSVATPAAT------------------KAGRTHPHFFHGLGPNARKLFMELYTENRSRLLA------PISRRSADVAGPVASSGRHLSAAPAPPDGTSLPSPTTARNGSQLSISRQQQQQLHEKTPPREEGKSPRSVSGSFAAXXXXXXXXXXXENVRHAAGAFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRERRLGGLPRAARRLWRRQRAVLAVQRVFRGHLGRSYASMWKVVAVLAATRLSAGWRRFSTQRKFLAFRARARAGAIG-----------------------------------------------------------LQRSIRGFLVRKAYKRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQ 1315          
BLAST of mRNA_M-pyrifera_M_contig11796.3720.1 vs. uniprot
Match: A0A1V9ZBH2_9STRA (Carbon catabolite repressor protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBH2_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.180e-8
Identity = 51/144 (35.42%), Postives = 73/144 (50.69%), Query Frame = 0
Query:  555 AATRVQRIRRLGAMPRAARRLRRRQRSALAVQRVFRGHLGRRYAAIWKLISALASTRISAGWRRFVDRRAFLVMLAKARAGATKMQALFRGHVARRYASWCASHYFAARCIQSGVRGFTARCRARALRSVRAWDLCGLPALLLL 698
            AA ++QR  R     +  RR+ +R R A+ +QRV+RG+L R +     L+   A+T I A +R F+ RRA   + AK   GA  +Q +FRGH AR++A W   H   A            R RA+  R      L  +PA+ LL
Sbjct:  873 AAIKLQRHFRTKLQTKVLRRILKRHRHAITIQRVYRGYLARVFTTELFLVYTFATTHIQATYRSFISRRATKALKAKMIIGAIGLQRIFRGHKARKWALWLRYHVANAXXXXXXXXXXXGRLRAQMFRHAHFKRLHVVPAVKLL 1016          
BLAST of mRNA_M-pyrifera_M_contig11796.3720.1 vs. uniprot
Match: A0A1V9YAY5_9STRA (Carbon catabolite repressor protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAY5_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.070e-5
Identity = 38/80 (47.50%), Postives = 44/80 (55.00%), Query Frame = 0
Query:  603 LISALASTRISAGWRRFVDRRAFLVMLAKARAGATKMQALFRGHVARRYASWCASHYFAARCIQSGVRGFTARCRARALR 682
            L+S  A T I A +R  V RRA   + A+  AGA  MQ LFRGH ARR+A W   H  +A  IQ  VRG   R RA   R
Sbjct:  963 LVSTFAVTHIQAAFRACVSRRATAALRARMSAGALAMQRLFRGHRARRWAFWLRYHVASAVQIQRVVRGHLGRLRAHMFR 1042          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11796.3720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KC52_9PHAE2.270e-15945.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMH0_ECTSI5.950e-14944.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1V9ZBH2_9STRA1.180e-835.42Carbon catabolite repressor protein n=1 Tax=Thraus... [more]
A0A1V9YAY5_9STRA1.070e-547.50Carbon catabolite repressor protein n=1 Tax=Achlya... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 577..599
e-value: 5.3
score: 15.9
coord: 690..712
e-value: 32.0
score: 9.6
coord: 631..653
e-value: 0.86
score: 18.6
coord: 661..679
e-value: 56.0
score: 7.5
coord: 604..626
e-value: 34.0
score: 9.3
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 661..678
e-value: 0.25
score: 11.3
coord: 580..597
e-value: 0.11
score: 12.3
coord: 634..651
e-value: 0.0031
score: 17.2
coord: 696..711
e-value: 0.021
score: 14.6
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 632..661
score: 8.389
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 578..602
score: 6.888
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 694..717
score: 7.602
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 658..686
score: 6.888
NoneNo IPR availableGENE3D1.20.5.190coord: 693..743
e-value: 4.5E-6
score: 28.3
coord: 607..651
e-value: 1.4E-5
score: 26.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11796contigM-pyrifera_M_contig11796:2453..9299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11796.3720.1mRNA_M-pyrifera_M_contig11796.3720.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11796 2453..9299 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11796.3720.1 ID=prot_M-pyrifera_M_contig11796.3720.1|Name=mRNA_M-pyrifera_M_contig11796.3720.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=758bp
QALAQATKSARGRDANPGAVRGPKLPGLTKATLLQTHIAIMVVSDAFIGL
SHADRLALVFTALYDGLPANTNTNTTTLTANINTTTATATATSAIATSNA
SSQRYSIPLAAGGSLPETPGRIVDHATGHATGSAQPSPTASPDTVRSQEG
RTPLHDGGDSAGGGVALQKKWEEEERGGGEEEDSAEDGATAGAGAGAGAE
AARVAGIESVIGVPPGGERRGGACESRRVVRGTVRASHVGVNVEALPVWG
GLDAVAGSSLLVDCRTPAQWRADGFEPTPQELWGPARSGHRTLANHPRVK
EPAIRSELERIIGESKALREASSQFEHFDRFNTSQAKAGKSKRGGNSPPP
PSRKRGKGKRGRGKRGGGGGDGEGGGGGSGGGGSGDGGGGGGGKRGSDAR
PHFFHGLGPNARRLFMELCDENRSRLLALMPSMPSVSSKTGDTPAPEPHQ
HNPAELSSAPSDGSSLPPTLSPRNCSRRKGSRKSGASGSQGSPRSPRTPS
SPKASLSSGPEGGRGGAADTLRHAAGAFAASGPPPDLDAGIMDRYGVLLG
KLVEAATRVQRIRRLGAMPRAARRLRRRQRSALAVQRVFRGHLGRRYAAI
WKLISALASTRISAGWRRFVDRRAFLVMLAKARAGATKMQALFRGHVARR
YASWCASHYFAARCIQSGVRGFTARCRARALRSVRAWDLCGLPALLLLQR
VVRGFLVRKAFSRRLEEAIRVRVIAPAAGVLQKCWRGKKGREEGALRRRM
AAAATEIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS