mRNA_M-pyrifera_M_contig1179.3702.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A6H5JNV2_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV2_9PHAE) HSP 1 Score: 645 bits (1663), Expect = 5.100e-225 Identity = 368/648 (56.79%), Postives = 413/648 (63.73%), Query Frame = 1
Query: 1 VVRWRDVGHEGVMAFMAPLLAENRPLLMSGYWTHQVLCKDAAQRWRTFAGIKSVLSSHGLDQLRVDVSCTKKGHSFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAI----------EMSPLSAPTSTAEERNAYLRTIGTDRMKEELPRIALERPPDWARLVTGLDPFTSHVVTTKWEAAGGAAKMPEFYEAIFGSVEKRAGAGN-------------------------------------------------------------VDGGAGG------GIAAGTEEVGVGDXXXXXXXXXXXXXTAEAV---MNAAF--GDRSIEDATQLQQPQQL---------AQHVVGADAGXXXXXXXXXXXXXXXXXXXXXTGRGFRRDEAFCGIALQERLVRLREMFAQEQCGKILNGAVGW 1671
VVRWRDVG EGVM++MAP +AEN PLLM GYW HQVL KDAAQRW TFAGIKSVL++ GLDQLRVD+SCTKKG+SFRGD+A+RQ V+L+L+DMVE+AEA E GQPHWA+++EVGLDYYLCQCPVISRE KPEVLSA+AGEFRTPSCV EEDLLQINLW+GAMETTTN+HYDANHNLLFVLKGSKRVALLPPDMT V AMPVFSES+NH GL+ + A + E RKGAVYADVAEGEA+FIPEGWWHQ+ SSRGTVA NVWFKG RPALCEGPS HMR Y+LRCLV SLLADRLREA DE + + D E DH P PA E SPL PTST EERN YLRT+GTDRMKEELPR+A ERP DWARLV+GLDP T++VVTT+WEAAGGA MPEFY AIFG+ E+ A G VDGG G G+A+G E G A A MN A GD + +A+ Q QQL +Q VGA A GF E G+ALQERLVRLRE F +EQCG +LN AVGW
Sbjct: 9 VVRWRDVGSEGVMSYMAPKMAENHPLLMCGYWAHQVLNKDAAQRWSTFAGIKSVLATRGLDQLRVDISCTKKGNSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVISREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVDAMPVFSESANHSGLQPAETAILVHGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSGHMRNYHLRCLVESLLADRLREATAGDEDRRAI-MAAADIEVATVTGDHV--PKPAADTSAAAAVEREWSPLCGPTSTVEERNLYLRTMGTDRMKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGAVGMPEFYAAIFGTGEEMAATGGGEEDARNRAEGATAAATAGATETGGTVQLAGSEGIGRTQQPATGAACDGAVVGAGGVGRFRVDGGGAGQASYGSGVASGGEAAGSVALLPGHVGAGEAAAAAAAAITTMNTAVWGGDGARCEASLQAQQQQLXXXXXXXXVSQQDVGAGAA------------------------GFASQEV-SGVALQERLVRLREAFVREQCGVVLNRAVGW 628
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: D8LLE0_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE0_ECTSI) HSP 1 Score: 552 bits (1422), Expect = 5.970e-192 Identity = 273/374 (72.99%), Postives = 305/374 (81.55%), Query Frame = 1
Query: 1 VVRWRDVGHEGVMAFMAPLLAENRPLLMSGYWTHQVLCKDAAQRWRTFAGIKSVLSSHGLDQLRVDVSCTKKGHSFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAI----------EMSPLSAPTSTAEERNAYLRTIGTDRMKE 1092
VVRWRDVG EGVM++MAP +A+N PLLMSG+W HQVL KDAAQRW TF GIKSVL++ GLDQLRVD+SCTKKG SFRGD+A+RQ V+L+L+DMVE+AEA E GQPHWA+++EVGLDYYLCQCPV+SRE KPEVLSA+AGEFRTPSCV +EDLLQINLW+GAMETTTN+HYDANHNLLFVLKGSKRVALLPPDMT GVHAMPVFSES+NH GL+ + A V E RKGAVYADVAEGEA+FIPEGWWHQ+ SSRGTVA NVWFKG RPALCEGPS+HMR YYLRCL+ SLLADRLREA DE + + D E DHA P PA E SPL +PTST EERN YLRTIGTD MKE
Sbjct: 9 VVRWRDVGSEGVMSYMAPKMAQNHPLLMSGHWAHQVLNKDAAQRWSTFTGIKSVLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVSKEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTAGVHAMPVFSESANHSGLQPAETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREATAGDEDRRAI-MAAADIEVATVTGDHA--PKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE 379
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A067C9Y8_SAPPC (JmjC domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9Y8_SAPPC) HSP 1 Score: 166 bits (420), Expect = 2.420e-42 Identity = 94/239 (39.33%), Postives = 128/239 (53.56%), Query Frame = 1
Query: 193 VDVSCTKKGH-SFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAV 906
VDV+C ++ GD RQ V L+ D V EA GQ HW E L +YL QCP+ S P VL +A F P + E L Q+NLW+ + T +HYDA N+L V++G+K V L P G H PV S+S+NH L ++ + A + V +ALFIPEGWWHQ++S T+A N WF G+RPAL + P HM+ YY R L+ +LA ++A+
Sbjct: 32 VDVACAPVAEDAYSGDVCLRQSVELKFGDFVAYYEAKRRGQSHWLMDTEDELQFYLAQCPLQSTTPATPAVLPHLASTFPPPKAIAEMALTQVNLWMTLQASRTTLHYDAYDNVLTVVRGAKHVKLFAPTSDVGAH--PVTSKSANHARLTLDEL-------DARAPDATFT-VTPTDALFIPEGWWHQVSSDPFTIAVNYWFDGLRPALVQHP--HMQPYYARVLLEDMLAHARKQAL 258
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: K3W726_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W726_GLOUD) HSP 1 Score: 165 bits (418), Expect = 8.330e-42 Identity = 117/355 (32.96%), Postives = 169/355 (47.61%), Query Frame = 1
Query: 184 QLRVDVSCTKKGHSF-RGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPE------VLSAVAGEFRTPSCVLE--EDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYAD-------VAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAIEMSPLSAPTSTAEERNAY--LRTIGTDRMKEELPRIALERPPDWARLVTGLDPFTSHVVTTKWEA 1194
Q VD++C +F G++ +RQ+V L+ D V EA+ AGQ HW + L++YLCQCP+ + +P+ VL + EF P V E L Q+NLW+ + T++HYDA N+L VL G K V L PP T ++A PV ++S+NH + + + K + + V G+AL IPEGWWHQ+ S T+A N WF GVR L + P M YY R L+ L+ R +A R + + G+ RG M + S AE+ N L T+G ++ R+A E P +W L+ V+TT WEA
Sbjct: 42 QTVVDIACKAPSSTFYSGEERSRQNVELKFGDFVLFYEASHAGQRHWLQDVD-DLEFYLCQCPIA---VYRPDATCSQPVLPKIMDEFMLPESVASYSESLSQVNLWIAVHSSRTSLHYDAYRNILVVLYGRKVVTLYPPSETRNLYAYPVHTKSTNHSQVN--------VAQPDLVKHPRFVNATSQRFIVNAGDALVIPEGWWHQVDSDAYTIAVNFWFDGVRQQLAQAPD--MTPYYSRVLLEDLMK-RETDAYLQQRRQRMIQQEL--GQERGDF------------MERILRCQSQAEKENMLIALDTLGPSEFRDAQVRLASEHPSEWRFLLENASEDFVAVLTTSWEA 367
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A8K1CCW9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCW9_PYTOL) HSP 1 Score: 163 bits (412), Expect = 3.620e-41 Identity = 107/342 (31.29%), Postives = 166/342 (48.54%), Query Frame = 1
Query: 193 VDVSCT-KKGHSFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAG------EFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLR--HEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAIEMSPLSAPTSTAEERNAYLRTIGTDRMKEELPRIALERPPDWARLVTGLDPFTSHVVTTKWE 1191
VDV+C K G + GD RQ V ++ D ++ +A G+PHW + E L++YLCQCP+ + KP+ S+VA F+ P+ + +L Q NLW+ + T++HYDA N+L VL G+K V L PP TG +++ P+FS+SSNH + H D + A + + G+AL+IPEGWWHQ+ +S +A N WF G+R L + P HM YY R + L+ RL + ++ R H+ A + S + P S E L ++ ++K+ +A P DW L+ + + W+
Sbjct: 46 VDVACKDKSGRFYSGDHRARQSVEVKFGDFLDYYQATNKGEPHWLGSVE-DLEFYLCQCPIA---VFKPDDTSSVATLPNIMQMFKVPNALAGANLTQTNLWIAVNSSRTSVHYDAYRNVLVVLHGTKTVTLYPPSDTGNLYSRPIFSKSSNHSEVNFAHPDLSQHPAFANAHPQ---VFKLEAGDALYIPEGWWHQVDTSAYCIAINYWFDGLRAELVQDP--HMTTYYARVAMEELV--RLESS--------RILRQF---------HEQAAHTVNSATPSRIVQPQSQTEHER-MLMSLSEQQLKDAQVTLASSHPDDWRALLENASVDFAAYLADHWD 358
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A1V9ZL82_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL82_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.470e-40 Identity = 91/231 (39.39%), Postives = 124/231 (53.68%), Query Frame = 1
Query: 193 VDVSCTKKGHS-FRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLL 882
VDV+C + + GD RQ V L+ D V A +G HW E L +YL QCP++S + P VL +A F P+ + + + Q+NLW+ + T +HYDA N+L V++G+K V L P T V A PV+S+S+NH L+ D R+ V ALFIPEGWWHQ++S T+A N WF G+RPAL P HM+ YY R LV L+
Sbjct: 40 VDVACAPPSEAAYSGDVRLRQSVELKFGDFVAYYSAKCSGGTHWLMETEDELQFYLAQCPLLSTQPSTPAVLPGLAPLFPPPAAIAKVPMTQVNLWMTLAASATTLHYDAYDNILRVVRGTKYVRLFTP--TSAVAAHPVYSKSANHSLLQMADIE--------AREPTYSFTVTPNNALFIPEGWWHQVSSEPFTIAVNYWFDGLRPALVMHP--HMQPYYARVLVEDLI 258
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: T0QUU3_SAPDV (JmjC domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QUU3_SAPDV) HSP 1 Score: 159 bits (403), Expect = 7.700e-40 Identity = 103/289 (35.64%), Postives = 141/289 (48.79%), Query Frame = 1
Query: 55 LLAENRPLLMSGYW-THQVLCKDAAQRWRTFAGIKSVLSSHGL---DQLRVDVSCTKKGH-SFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAV 906
+ A+ RP L+ W H D A ++L+S G + VDV+C ++ GD RQ V L+ D V EA GQ HW E L +YL QCP+ S P VL + F P + L Q+NLW+ + T +HYDA N+L V++G+K V L P T V A PV S+S+NH L + + A + V ALFIPEGWWHQ++S T+A N WF G+RPAL + P HM+ YY R L+ +L + A+
Sbjct: 1 MFADRRPCLLPMAWHAHAAQGDDDATT--------ALLASAGFVAHHETVVDVACAPVAEDAYSGDVRLRQSVELKFGDFVAYYEAKRRGQAHWLMDTEDELQFYLAQCPLHSTAPATPAVLPHLVSTFPPPKAIAGMALTQVNLWMTLQASRTTLHYDAYDNVLTVVRGAKHVKLFAP--TTNVDAHPVTSKSANHAQLTLYEL-------DARAPDATFT-VTPTNALFIPEGWWHQVSSDPFTIAVNYWFDGLRPALVQHP--HMQPYYARVLMEDMLTHARKHAL 269
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A662YBM9_9STRA (JmjC domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBM9_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.630e-39 Identity = 114/382 (29.84%), Postives = 182/382 (47.64%), Query Frame = 1
Query: 169 SHGLDQLRVDVSCTKKGHS-FRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEV------LSAVAGEF------RT--------PSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGE-ALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAIEMSPLSAPTSTAEERNAYLRTIGTDRMKEELPRIALERPPDWARLVTGLDPFTSHVVTTKWEAAGGAAKMPEFYEAIFGSV 1248
SH + ++ VD++C ++ + + GD +RQ+V L+ D ++ +A QPHW + L++YLCQCP+ + KP+ L AV G+F RT P+C+ ++ + Q+NLW+ A T++HYDA N+L +L G K V L PP + ++ P++++S+NH + VA + +A A G ALFIPEGWWHQ+ S T+A N W++G+R L P HM YY R L+ L+ ++ D L + + + ++ P I S L A TS R L + + + R+A DW L+ V+T W+ A +F IFG++
Sbjct: 13 SHAVLRVVVDIACKERTNGCYSGDDKSRQNVELKFGDFLDYYQAAFTKQPHWLQTVD-DLEFYLCQCPIA---VYKPDATCTKASLPAVMGDFCILLTTRTDDLLFGFRPACLDDKPVSQVNLWMSAQPCRTSLHYDAYQNILVILYGRKTVTLYPPSESDKLYPYPIYTKSANHSQVNVAQPDHVAHPRFAEAQSQRFAVSAGGTYALFIPEGWWHQVDSDEFTIAVNYWWEGMRNQLTADP--HMTPYYSRILLEELVKQQI------DSHLLALSTASYSTSAL----TNSLPQDDGIVTSVLLAATSQCG-RERILLPLNSGELLRVQRRLAEHHAADWRDLLANASVDLVAVLTRCWDRTDLEA---DFLSVIFGAL 374
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A6G0XBD0_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBD0_9STRA) HSP 1 Score: 157 bits (397), Expect = 7.430e-39 Identity = 90/241 (37.34%), Postives = 124/241 (51.45%), Query Frame = 1
Query: 193 VDVSCTKKGH-SFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRT-PSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAG--------VACSAEGMRKGAVYADVAE-GEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLL 882
VD++C + +F GD RQ V L+ D VE +A AG+ HW E L +YL QCP+ S E P VL + P C+ +L Q+NLW+ + T++HYDA N+L VL G+K V L PP + PV+S+S+NH L D+ VA + G + D+ EAL+IPEGWWHQ+ S T+A N WF G+R L M+ YY R L+ L+
Sbjct: 41 VDIACAPRSDDAFSGDVRRRQSVELKFGDYVEYFQAKMAGKTHWLMDTEDELKFYLAQCPLYSTSAETPAVLPHLLTHLPPKPPCLDAIELTQVNLWMAVAPSETSLHYDAYENILHVLHGAKHVRLYPPSAVAAIEPHPVYSKSANHTTLSLADSKALPGFVDFTVAANRSEFVAGTAFYDLLSIVEALYIPEGWWHQVRSEAFTIAVNYWFNGMRAQLLGDGD--MQPYYARVLLEDLI 279
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A024U5K3_9STRA (JmjC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5K3_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.370e-38 Identity = 98/266 (36.84%), Postives = 140/266 (52.63%), Query Frame = 1
Query: 139 TFAGIKSVLSSHGLDQLR---VDVSCTKKG-HSFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAV---AGEFRTPSCVLEE-DLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTD 912
TFA +++ S G+ R VDV+CT+ ++ GD RQ V L+ D V +A + G HW E L +YL QCP+ S + P VL + + P VL+ D+ QINLW+ + T++HYDA N+L V++GSKRV L PP T + ++S+SSNH L E++ + E +V AL+IPEGWWHQ+ S+ TVA N WF G+R L P+ M YY R +V L+ +A+ D
Sbjct: 23 TFAA--ALMKSQGMKLHRSTVVDVACTQPSVDAYSGDVRLRQSVELKFGDFVAYYQAKQGGSFHWLMEAESDLQFYLAQCPLYSTSADVPAVLPNLLPCCAALKPP--VLDTVDVTQINLWMTVAPSDTSVHYDAYENILHVVEGSKRVRLYPPSATPAIQPHAIYSKSSNHTILTLEESKALPDFVE--------FNVDANTALYIPEGWWHQVHSASFTVAVNYWFDGMRSRLLAQPT--MVPYYARVVVEDLVRSARLDAMKD 274 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1179.3702.1 >prot_M-pyrifera_M_contig1179.3702.1 ID=prot_M-pyrifera_M_contig1179.3702.1|Name=mRNA_M-pyrifera_M_contig1179.3702.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=558bp VVRWRDVGHEGVMAFMAPLLAENRPLLMSGYWTHQVLCKDAAQRWRTFAGback to top mRNA from alignment at M-pyrifera_M_contig1179:12181..20935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1179.3702.1 ID=mRNA_M-pyrifera_M_contig1179.3702.1|Name=mRNA_M-pyrifera_M_contig1179.3702.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8755bp|location=Sequence derived from alignment at M-pyrifera_M_contig1179:12181..20935- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1179:12181..20935- >mRNA_M-pyrifera_M_contig1179.3702.1 ID=mRNA_M-pyrifera_M_contig1179.3702.1|Name=mRNA_M-pyrifera_M_contig1179.3702.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3348bp|location=Sequence derived from alignment at M-pyrifera_M_contig1179:12181..20935- (Macrocystis pyrifera P11B4 male)back to top |