mRNA_M-pyrifera_M_contig1179.3702.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1179.3702.1
Unique NamemRNA_M-pyrifera_M_contig1179.3702.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A6H5JNV2_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV2_9PHAE)

HSP 1 Score: 645 bits (1663), Expect = 5.100e-225
Identity = 368/648 (56.79%), Postives = 413/648 (63.73%), Query Frame = 1
Query:    1 VVRWRDVGHEGVMAFMAPLLAENRPLLMSGYWTHQVLCKDAAQRWRTFAGIKSVLSSHGLDQLRVDVSCTKKGHSFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAI----------EMSPLSAPTSTAEERNAYLRTIGTDRMKEELPRIALERPPDWARLVTGLDPFTSHVVTTKWEAAGGAAKMPEFYEAIFGSVEKRAGAGN-------------------------------------------------------------VDGGAGG------GIAAGTEEVGVGDXXXXXXXXXXXXXTAEAV---MNAAF--GDRSIEDATQLQQPQQL---------AQHVVGADAGXXXXXXXXXXXXXXXXXXXXXTGRGFRRDEAFCGIALQERLVRLREMFAQEQCGKILNGAVGW 1671
            VVRWRDVG EGVM++MAP +AEN PLLM GYW HQVL KDAAQRW TFAGIKSVL++ GLDQLRVD+SCTKKG+SFRGD+A+RQ V+L+L+DMVE+AEA E GQPHWA+++EVGLDYYLCQCPVISRE  KPEVLSA+AGEFRTPSCV EEDLLQINLW+GAMETTTN+HYDANHNLLFVLKGSKRVALLPPDMT  V AMPVFSES+NH GL+  + A +    E  RKGAVYADVAEGEA+FIPEGWWHQ+ SSRGTVA NVWFKG RPALCEGPS HMR Y+LRCLV SLLADRLREA   DE    +  +  D E      DH   P PA           E SPL  PTST EERN YLRT+GTDRMKEELPR+A ERP DWARLV+GLDP T++VVTT+WEAAGGA  MPEFY AIFG+ E+ A  G                                                              VDGG  G      G+A+G E  G                 A A    MN A   GD +  +A+   Q QQL         +Q  VGA A                         GF   E   G+ALQERLVRLRE F +EQCG +LN AVGW
Sbjct:    9 VVRWRDVGSEGVMSYMAPKMAENHPLLMCGYWAHQVLNKDAAQRWSTFAGIKSVLATRGLDQLRVDISCTKKGNSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVISREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVDAMPVFSESANHSGLQPAETAILVHGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSGHMRNYHLRCLVESLLADRLREATAGDEDRRAI-MAAADIEVATVTGDHV--PKPAADTSAAAAVEREWSPLCGPTSTVEERNLYLRTMGTDRMKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGAVGMPEFYAAIFGTGEEMAATGGGEEDARNRAEGATAAATAGATETGGTVQLAGSEGIGRTQQPATGAACDGAVVGAGGVGRFRVDGGGAGQASYGSGVASGGEAAGSVALLPGHVGAGEAAAAAAAAITTMNTAVWGGDGARCEASLQAQQQQLXXXXXXXXVSQQDVGAGAA------------------------GFASQEV-SGVALQERLVRLREAFVREQCGVVLNRAVGW 628          
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: D8LLE0_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE0_ECTSI)

HSP 1 Score: 552 bits (1422), Expect = 5.970e-192
Identity = 273/374 (72.99%), Postives = 305/374 (81.55%), Query Frame = 1
Query:    1 VVRWRDVGHEGVMAFMAPLLAENRPLLMSGYWTHQVLCKDAAQRWRTFAGIKSVLSSHGLDQLRVDVSCTKKGHSFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAI----------EMSPLSAPTSTAEERNAYLRTIGTDRMKE 1092
            VVRWRDVG EGVM++MAP +A+N PLLMSG+W HQVL KDAAQRW TF GIKSVL++ GLDQLRVD+SCTKKG SFRGD+A+RQ V+L+L+DMVE+AEA E GQPHWA+++EVGLDYYLCQCPV+SRE  KPEVLSA+AGEFRTPSCV +EDLLQINLW+GAMETTTN+HYDANHNLLFVLKGSKRVALLPPDMT GVHAMPVFSES+NH GL+  + A V    E  RKGAVYADVAEGEA+FIPEGWWHQ+ SSRGTVA NVWFKG RPALCEGPS+HMR YYLRCL+ SLLADRLREA   DE    +  +  D E      DHA  P PA           E SPL +PTST EERN YLRTIGTD MKE
Sbjct:    9 VVRWRDVGSEGVMSYMAPKMAQNHPLLMSGHWAHQVLNKDAAQRWSTFTGIKSVLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVSKEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTAGVHAMPVFSESANHSGLQPAETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREATAGDEDRRAI-MAAADIEVATVTGDHA--PKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE 379          
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A067C9Y8_SAPPC (JmjC domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9Y8_SAPPC)

HSP 1 Score: 166 bits (420), Expect = 2.420e-42
Identity = 94/239 (39.33%), Postives = 128/239 (53.56%), Query Frame = 1
Query:  193 VDVSCTKKGH-SFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAV 906
            VDV+C      ++ GD   RQ V L+  D V   EA   GQ HW    E  L +YL QCP+ S     P VL  +A  F  P  + E  L Q+NLW+    + T +HYDA  N+L V++G+K V L  P    G H  PV S+S+NH  L  ++        +     A +  V   +ALFIPEGWWHQ++S   T+A N WF G+RPAL + P  HM+ YY R L+  +LA   ++A+
Sbjct:   32 VDVACAPVAEDAYSGDVCLRQSVELKFGDFVAYYEAKRRGQSHWLMDTEDELQFYLAQCPLQSTTPATPAVLPHLASTFPPPKAIAEMALTQVNLWMTLQASRTTLHYDAYDNVLTVVRGAKHVKLFAPTSDVGAH--PVTSKSANHARLTLDEL-------DARAPDATFT-VTPTDALFIPEGWWHQVSSDPFTIAVNYWFDGLRPALVQHP--HMQPYYARVLLEDMLAHARKQAL 258          
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: K3W726_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W726_GLOUD)

HSP 1 Score: 165 bits (418), Expect = 8.330e-42
Identity = 117/355 (32.96%), Postives = 169/355 (47.61%), Query Frame = 1
Query:  184 QLRVDVSCTKKGHSF-RGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPE------VLSAVAGEFRTPSCVLE--EDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYAD-------VAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAIEMSPLSAPTSTAEERNAY--LRTIGTDRMKEELPRIALERPPDWARLVTGLDPFTSHVVTTKWEA 1194
            Q  VD++C     +F  G++ +RQ+V L+  D V   EA+ AGQ HW    +  L++YLCQCP+    + +P+      VL  +  EF  P  V    E L Q+NLW+    + T++HYDA  N+L VL G K V L PP  T  ++A PV ++S+NH  +          +   + K   + +       V  G+AL IPEGWWHQ+ S   T+A N WF GVR  L + P   M  YY R L+  L+  R  +A     R   + +    G+ RG              M  +    S AE+ N    L T+G    ++   R+A E P +W  L+         V+TT WEA
Sbjct:   42 QTVVDIACKAPSSTFYSGEERSRQNVELKFGDFVLFYEASHAGQRHWLQDVD-DLEFYLCQCPIA---VYRPDATCSQPVLPKIMDEFMLPESVASYSESLSQVNLWIAVHSSRTSLHYDAYRNILVVLYGRKVVTLYPPSETRNLYAYPVHTKSTNHSQVN--------VAQPDLVKHPRFVNATSQRFIVNAGDALVIPEGWWHQVDSDAYTIAVNFWFDGVRQQLAQAPD--MTPYYSRVLLEDLMK-RETDAYLQQRRQRMIQQEL--GQERGDF------------MERILRCQSQAEKENMLIALDTLGPSEFRDAQVRLASEHPSEWRFLLENASEDFVAVLTTSWEA 367          
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A8K1CCW9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCW9_PYTOL)

HSP 1 Score: 163 bits (412), Expect = 3.620e-41
Identity = 107/342 (31.29%), Postives = 166/342 (48.54%), Query Frame = 1
Query:  193 VDVSCT-KKGHSFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAG------EFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLR--HEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAIEMSPLSAPTSTAEERNAYLRTIGTDRMKEELPRIALERPPDWARLVTGLDPFTSHVVTTKWE 1191
            VDV+C  K G  + GD   RQ V ++  D ++  +A   G+PHW  + E  L++YLCQCP+    + KP+  S+VA        F+ P+ +   +L Q NLW+    + T++HYDA  N+L VL G+K V L PP  TG +++ P+FS+SSNH  +   H D +     A    +      +  G+AL+IPEGWWHQ+ +S   +A N WF G+R  L + P  HM  YY R  +  L+  RL  +        ++ R           H+ A     +   S +  P S  E     L ++   ++K+    +A   P DW  L+       +  +   W+
Sbjct:   46 VDVACKDKSGRFYSGDHRARQSVEVKFGDFLDYYQATNKGEPHWLGSVE-DLEFYLCQCPIA---VFKPDDTSSVATLPNIMQMFKVPNALAGANLTQTNLWIAVNSSRTSVHYDAYRNVLVVLHGTKTVTLYPPSDTGNLYSRPIFSKSSNHSEVNFAHPDLSQHPAFANAHPQ---VFKLEAGDALYIPEGWWHQVDTSAYCIAINYWFDGLRAELVQDP--HMTTYYARVAMEELV--RLESS--------RILRQF---------HEQAAHTVNSATPSRIVQPQSQTEHER-MLMSLSEQQLKDAQVTLASSHPDDWRALLENASVDFAAYLADHWD 358          
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A1V9ZL82_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL82_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.470e-40
Identity = 91/231 (39.39%), Postives = 124/231 (53.68%), Query Frame = 1
Query:  193 VDVSCTKKGHS-FRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLL 882
            VDV+C     + + GD   RQ V L+  D V    A  +G  HW    E  L +YL QCP++S +   P VL  +A  F  P+ + +  + Q+NLW+    + T +HYDA  N+L V++G+K V L  P  T  V A PV+S+S+NH  L+  D           R+      V    ALFIPEGWWHQ++S   T+A N WF G+RPAL   P  HM+ YY R LV  L+
Sbjct:   40 VDVACAPPSEAAYSGDVRLRQSVELKFGDFVAYYSAKCSGGTHWLMETEDELQFYLAQCPLLSTQPSTPAVLPGLAPLFPPPAAIAKVPMTQVNLWMTLAASATTLHYDAYDNILRVVRGTKYVRLFTP--TSAVAAHPVYSKSANHSLLQMADIE--------AREPTYSFTVTPNNALFIPEGWWHQVSSEPFTIAVNYWFDGLRPALVMHP--HMQPYYARVLVEDLI 258          
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: T0QUU3_SAPDV (JmjC domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QUU3_SAPDV)

HSP 1 Score: 159 bits (403), Expect = 7.700e-40
Identity = 103/289 (35.64%), Postives = 141/289 (48.79%), Query Frame = 1
Query:   55 LLAENRPLLMSGYW-THQVLCKDAAQRWRTFAGIKSVLSSHGL---DQLRVDVSCTKKGH-SFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAV 906
            + A+ RP L+   W  H     D A          ++L+S G     +  VDV+C      ++ GD   RQ V L+  D V   EA   GQ HW    E  L +YL QCP+ S     P VL  +   F  P  +    L Q+NLW+    + T +HYDA  N+L V++G+K V L  P  T  V A PV S+S+NH  L   +        +     A +  V    ALFIPEGWWHQ++S   T+A N WF G+RPAL + P  HM+ YY R L+  +L    + A+
Sbjct:    1 MFADRRPCLLPMAWHAHAAQGDDDATT--------ALLASAGFVAHHETVVDVACAPVAEDAYSGDVRLRQSVELKFGDFVAYYEAKRRGQAHWLMDTEDELQFYLAQCPLHSTAPATPAVLPHLVSTFPPPKAIAGMALTQVNLWMTLQASRTTLHYDAYDNVLTVVRGAKHVKLFAP--TTNVDAHPVTSKSANHAQLTLYEL-------DARAPDATFT-VTPTNALFIPEGWWHQVSSDPFTIAVNYWFDGLRPALVQHP--HMQPYYARVLMEDMLTHARKHAL 269          
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A662YBM9_9STRA (JmjC domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBM9_9STRA)

HSP 1 Score: 157 bits (397), Expect = 4.630e-39
Identity = 114/382 (29.84%), Postives = 182/382 (47.64%), Query Frame = 1
Query:  169 SHGLDQLRVDVSCTKKGHS-FRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEV------LSAVAGEF------RT--------PSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGE-ALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAIEMSPLSAPTSTAEERNAYLRTIGTDRMKEELPRIALERPPDWARLVTGLDPFTSHVVTTKWEAAGGAAKMPEFYEAIFGSV 1248
            SH + ++ VD++C ++ +  + GD  +RQ+V L+  D ++  +A    QPHW    +  L++YLCQCP+    + KP+       L AV G+F      RT        P+C+ ++ + Q+NLW+ A    T++HYDA  N+L +L G K V L PP  +  ++  P++++S+NH  +       VA       +   +A  A G  ALFIPEGWWHQ+ S   T+A N W++G+R  L   P  HM  YY R L+  L+  ++      D     L  + +   +      ++ P    I  S L A TS    R   L  + +  +     R+A     DW  L+         V+T  W+     A   +F   IFG++
Sbjct:   13 SHAVLRVVVDIACKERTNGCYSGDDKSRQNVELKFGDFLDYYQAAFTKQPHWLQTVD-DLEFYLCQCPIA---VYKPDATCTKASLPAVMGDFCILLTTRTDDLLFGFRPACLDDKPVSQVNLWMSAQPCRTSLHYDAYQNILVILYGRKTVTLYPPSESDKLYPYPIYTKSANHSQVNVAQPDHVAHPRFAEAQSQRFAVSAGGTYALFIPEGWWHQVDSDEFTIAVNYWWEGMRNQLTADP--HMTPYYSRILLEELVKQQI------DSHLLALSTASYSTSAL----TNSLPQDDGIVTSVLLAATSQCG-RERILLPLNSGELLRVQRRLAEHHAADWRDLLANASVDLVAVLTRCWDRTDLEA---DFLSVIFGAL 374          
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A6G0XBD0_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBD0_9STRA)

HSP 1 Score: 157 bits (397), Expect = 7.430e-39
Identity = 90/241 (37.34%), Postives = 124/241 (51.45%), Query Frame = 1
Query:  193 VDVSCTKKGH-SFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRT-PSCVLEEDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAG--------VACSAEGMRKGAVYADVAE-GEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLL 882
            VD++C  +   +F GD   RQ V L+  D VE  +A  AG+ HW    E  L +YL QCP+ S   E P VL  +       P C+   +L Q+NLW+    + T++HYDA  N+L VL G+K V L PP     +   PV+S+S+NH  L   D+          VA +      G  + D+    EAL+IPEGWWHQ+ S   T+A N WF G+R  L       M+ YY R L+  L+
Sbjct:   41 VDIACAPRSDDAFSGDVRRRQSVELKFGDYVEYFQAKMAGKTHWLMDTEDELKFYLAQCPLYSTSAETPAVLPHLLTHLPPKPPCLDAIELTQVNLWMAVAPSETSLHYDAYENILHVLHGAKHVRLYPPSAVAAIEPHPVYSKSANHTTLSLADSKALPGFVDFTVAANRSEFVAGTAFYDLLSIVEALYIPEGWWHQVRSEAFTIAVNYWFNGMRAQLLGDGD--MQPYYARVLLEDLI 279          
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Match: A0A024U5K3_9STRA (JmjC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5K3_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.370e-38
Identity = 98/266 (36.84%), Postives = 140/266 (52.63%), Query Frame = 1
Query:  139 TFAGIKSVLSSHGLDQLR---VDVSCTKKG-HSFRGDQANRQHVSLRLLDMVELAEANEAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAV---AGEFRTPSCVLEE-DLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHAMPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWWHQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLREAVTD 912
            TFA   +++ S G+   R   VDV+CT+    ++ GD   RQ V L+  D V   +A + G  HW    E  L +YL QCP+ S   + P VL  +       + P  VL+  D+ QINLW+    + T++HYDA  N+L V++GSKRV L PP  T  +    ++S+SSNH  L  E++  +    E         +V    AL+IPEGWWHQ+ S+  TVA N WF G+R  L   P+  M  YY R +V  L+     +A+ D
Sbjct:   23 TFAA--ALMKSQGMKLHRSTVVDVACTQPSVDAYSGDVRLRQSVELKFGDFVAYYQAKQGGSFHWLMEAESDLQFYLAQCPLYSTSADVPAVLPNLLPCCAALKPP--VLDTVDVTQINLWMTVAPSDTSVHYDAYENILHVVEGSKRVRLYPPSATPAIQPHAIYSKSSNHTILTLEESKALPDFVE--------FNVDANTALYIPEGWWHQVHSASFTVAVNYWFDGMRSRLLAQPT--MVPYYARVVVEDLVRSARLDAMKD 274          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1179.3702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNV2_9PHAE5.100e-22556.79JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LLE0_ECTSI5.970e-19272.99JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A067C9Y8_SAPPC2.420e-4239.33JmjC domain-containing protein n=1 Tax=Saprolegnia... [more]
K3W726_GLOUD8.330e-4232.96JmjC domain-containing protein n=1 Tax=Globisporan... [more]
A0A8K1CCW9_PYTOL3.620e-4131.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZL82_9STRA1.470e-4039.39JmjC domain-containing protein n=1 Tax=Achlya hypo... [more]
T0QUU3_SAPDV7.700e-4035.64JmjC domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A662YBM9_9STRA4.630e-3929.84JmjC domain-containing protein n=1 Tax=Nothophytop... [more]
A0A6G0XBD0_9STRA7.430e-3937.34JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A024U5K3_9STRA1.370e-3836.84JmjC domain-containing protein n=2 Tax=Aphanomyces... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1179contigM-pyrifera_M_contig1179:12181..20935 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score552.4
Seed ortholog evalue2.5e-154
Seed eggNOG ortholog2880.D8LLE0
KEGG koko:K10277
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
EggNOG OGsKOG2132@1,KOG2132@2759
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-27_002280.1
EC1.14.11.27
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons9
Model size1674
Cds size1674
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815697.258029-CDS-M-pyrifera_M_contig1179:12180..127621622815697.258029-CDS-M-pyrifera_M_contig1179:12180..12762Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 12181..12762 -
1692277526.7276802-CDS-M-pyrifera_M_contig1179:12180..127621692277526.7276802-CDS-M-pyrifera_M_contig1179:12180..12762Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 12181..12762 -
1622815697.2718182-CDS-M-pyrifera_M_contig1179:13030..131361622815697.2718182-CDS-M-pyrifera_M_contig1179:13030..13136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 13031..13136 -
1692277526.7488465-CDS-M-pyrifera_M_contig1179:13030..131361692277526.7488465-CDS-M-pyrifera_M_contig1179:13030..13136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 13031..13136 -
1622815697.2848594-CDS-M-pyrifera_M_contig1179:13575..137601622815697.2848594-CDS-M-pyrifera_M_contig1179:13575..13760Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 13576..13760 -
1692277526.766-CDS-M-pyrifera_M_contig1179:13575..137601692277526.766-CDS-M-pyrifera_M_contig1179:13575..13760Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 13576..13760 -
1622815697.298441-CDS-M-pyrifera_M_contig1179:17307..173871622815697.298441-CDS-M-pyrifera_M_contig1179:17307..17387Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 17308..17387 -
1692277526.775053-CDS-M-pyrifera_M_contig1179:17307..173871692277526.775053-CDS-M-pyrifera_M_contig1179:17307..17387Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 17308..17387 -
1622815697.3111537-CDS-M-pyrifera_M_contig1179:18060..181751622815697.3111537-CDS-M-pyrifera_M_contig1179:18060..18175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 18061..18175 -
1692277526.7890115-CDS-M-pyrifera_M_contig1179:18060..181751692277526.7890115-CDS-M-pyrifera_M_contig1179:18060..18175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 18061..18175 -
1622815697.3244402-CDS-M-pyrifera_M_contig1179:18446..186211622815697.3244402-CDS-M-pyrifera_M_contig1179:18446..18621Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 18447..18621 -
1692277526.8059156-CDS-M-pyrifera_M_contig1179:18446..186211692277526.8059156-CDS-M-pyrifera_M_contig1179:18446..18621Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 18447..18621 -
1622815697.3345616-CDS-M-pyrifera_M_contig1179:19548..196461622815697.3345616-CDS-M-pyrifera_M_contig1179:19548..19646Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 19549..19646 -
1692277526.8184521-CDS-M-pyrifera_M_contig1179:19548..196461692277526.8184521-CDS-M-pyrifera_M_contig1179:19548..19646Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 19549..19646 -
1622815697.3438568-CDS-M-pyrifera_M_contig1179:20027..201701622815697.3438568-CDS-M-pyrifera_M_contig1179:20027..20170Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 20028..20170 -
1692277526.8338397-CDS-M-pyrifera_M_contig1179:20027..201701692277526.8338397-CDS-M-pyrifera_M_contig1179:20027..20170Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 20028..20170 -
1622815697.353349-CDS-M-pyrifera_M_contig1179:20745..209351622815697.353349-CDS-M-pyrifera_M_contig1179:20745..20935Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 20746..20935 -
1692277526.850597-CDS-M-pyrifera_M_contig1179:20745..209351692277526.850597-CDS-M-pyrifera_M_contig1179:20745..20935Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1179 20746..20935 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1179.3702.1prot_M-pyrifera_M_contig1179.3702.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1179 12181..20935 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1179.3702.1

>prot_M-pyrifera_M_contig1179.3702.1 ID=prot_M-pyrifera_M_contig1179.3702.1|Name=mRNA_M-pyrifera_M_contig1179.3702.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=558bp
VVRWRDVGHEGVMAFMAPLLAENRPLLMSGYWTHQVLCKDAAQRWRTFAG
IKSVLSSHGLDQLRVDVSCTKKGHSFRGDQANRQHVSLRLLDMVELAEAN
EAGQPHWAAAEEVGLDYYLCQCPVISRELEKPEVLSAVAGEFRTPSCVLE
EDLLQINLWLGAMETTTNMHYDANHNLLFVLKGSKRVALLPPDMTGGVHA
MPVFSESSNHCGLRHEDAAGVACSAEGMRKGAVYADVAEGEALFIPEGWW
HQITSSRGTVAANVWFKGVRPALCEGPSRHMREYYLRCLVGSLLADRLRE
AVTDDERGEKLPRSGFDGESRGAKHDHATPPPPAIEMSPLSAPTSTAEER
NAYLRTIGTDRMKEELPRIALERPPDWARLVTGLDPFTSHVVTTKWEAAG
GAAKMPEFYEAIFGSVEKRAGAGNVDGGAGGGIAAGTEEVGVGDGVGGDV
GGGVEGATAEAVMNAAFGDRSIEDATQLQQPQQLAQHVVGADAGAAAAAA
AAAAAAAAAAAAAAATGRGFRRDEAFCGIALQERLVRLREMFAQEQCGKI
LNGAVGW*
back to top

mRNA from alignment at M-pyrifera_M_contig1179:12181..20935-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1179.3702.1 ID=mRNA_M-pyrifera_M_contig1179.3702.1|Name=mRNA_M-pyrifera_M_contig1179.3702.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8755bp|location=Sequence derived from alignment at M-pyrifera_M_contig1179:12181..20935- (Macrocystis pyrifera P11B4 male)
GTCGTGCGCTGGCGCGACGTGGGCCACGAGGGTGTGATGGCTTTTATGGC GCCGCTGCTGGCGGAAAATCGTCCCCTTTTAATGTCCGGGTATTGGACTC ACCAGGTGCTGTGCAAGGACGCAGCCCAGCGGTGGAGGACTTTCGCGGGG ATCAAGTCGGTCTTGTCTAGCCACGGATTGGATCAGCTCAGTGAGTCTCG GTTTTCAGTGGGGGGTTGAACAGTTCGCGGGAAGTAAAGTGAAGTGAAGT GTGACCTGCGCGCTAGTTGCGTGAGCAGGAGTCGTTGTTGCTCAATGACG CTCGGGTGGGTAGTAGTATATGGATGTAGGCTTTTTCTTCGGCATGGTGA TGGATGTATTTCGCGGAAGATAACCTGCCGCCCCGGTAGCGGGTTAACGC TACCACTTCAGTCGGGACCTATAGGGACCCAGGGCTTCATACGTAGATAC GGCCAAGTATTTACCTGACACGGGTATATTTTTACGTACAGTAGCTACCG AGAGGGCAGTTTTGGATTGAGCTCACCCATTGATTTCCGGTCGTTTCGTG CTGAACACCCGCTCTGGGCATCGCCTTGACATCGCAGTCAGACGATGTTC CCGGTGACTGAACCGCAACTCTTTTCGCGGTCTCGCTGCTGCAAGTAGTG CAAACCTCGGATAGCTACCGTAAGAGTGCCTCGCATGTTGTCGACCCCCC CCCCTCCTTATACGGCTACGGCCATGCATGTTATTGAATACAACCCCCCC CCCGACTTGCCCCAGGGGTGGACGTCTCCTGCACCAAAAAGGGGCACTCA TTTCGTGGGGATCAAGCCAATCGGCAGCACGTCAGCCTAAGGTTGTTGGA CATGGTGGAGCTGGCAGAGGCAAACGAAGCGGGGCAGCCGCACTGGGCAG CGGCGGAGGTAAGCCGGCCCTTCGTTTCGATGTTGTGCCTTGGATTTTCA ACCACGAGCATGCAGCACCTGCCCCCAAAATGCGACTGCGGAATGAGACC AGCGGATAGCGATGACGGTCTGCTCGGTATTAGGATGTCGACGACGCAGG AGGTGGCAGTCTTGGACGGGCCTGCCGCCTGCAGAATACCAGCACGAATT ATGTAAGCTAGTATTGGTCCTGACGCTAAACCGCGGTGCGCCACACCGAG TCGCCCCGTCGGGTCGTGTGCGATATATCGCCTGCGTAGGTGCTGCCGTA ACACAAGAGATGCATAACTTTTCGCTCGCGTGCGCATTGTCTTGAGTTTT GCCCTGCTCTGTGTTGTATGTTTTCACGTCCTCGCGCAGGAAGTTGGACT GGACTATTATTTATGCCAGTGCCCTGTGATTTCCAGAGAGTTGGAAAAGC CGGAGGTGTTGAGCGCCGTCGCGGGGGAGTTCCGCACGTAAGAGCGGCAT TTTTTTGGCCTGTTATAGGCTATTACGTAAGTTGTACCAGGTAGCCGTGC TGCGCGCGGGCATCGCCCAAAACCACTTGTTGGAGATGCGCAAACTATGG TCGCCACAACATAAGTTCGCCATAACATATTTTCAGCCGGGTCTAGCGAT AGCGATCGCGTAGCGTGCGAGACTCCGTACCGGCAACATTTGTACGCCGG CCGGAAGGAAAGTAGTCGCTGTGACGCTGCAGCGAGTCATTGGGTCTGGT GGTGACACACAGATGCGGTGAAAGGCGAAGGCAAAGTCGCCGCCCCCGTC CAGTATACTAGCCCTATTATTGTTCGAGCGCCGCGTGTACGCAGAGCGGG CAGCCGACCCAAAAAATCTTGAAATTCCCGACTTTGGTTGTCGTTCTGCT TGTAGAAGAGACGTGTAGGTATGGGGCTGGTACTGTCGTTGACCACAACC AGAACCATGGTATCGCACACCGGACGAAAAGGCGTAAATTTTGTGATTTT TCCTTGAAGAAAGCCTGCACGACCTCCTCAGGCACCACAAGCCAAGTTTT CGGTATACCCCTCAAACAGCCTGCTGCGGCGACATATTGTAGAGCTACAG CGAGATAGCGTAGCTCCTGGACCGCGCCAGGGTCGTCCACGCGCTGCGGC AGTGGCTGCGGTTACGGGATGTTTTCACGTACTACTGGGAGATTGACAGC ATAATGTGTTGTGGAATTTCCCCCAAGGTTTCGCACATGGGCAATACCTT ACGTTGGTGATACCCACGTGGCTGTGCCCGGCACGGACTGGCGTACAGCA AGGCTGTCCGCCGTGCGCGCTCTCTCTCTCTTTCGTTGCCTGTCTGAGAC AGTAACACTCTGTATGGTGTGCTATCTCTTTATTTCGTTGGCGATGCTAC CGTCTTCCGTCCAGGCCTTCGTGTGTCTTGGAAGAAGACCTACTTCAGAT CAATCTGTGGCTGGGGGCGATGGAGACGACGACCAATATGCACTACGACG CCAACCACAACCTTCTGTTCGTGCTGAAGGGGAGCAAGAGGGTGGCCCTC CTGCCGCCCGATATGACCGGCGGGGTGCATGCCATGCCGGTGGGTGCGGC CCATTGGCCGGGTCAATACATATTCGCCGCCTGTTTCCCGACCTTGTGGT TGGTCGTTTGCTTTTATCGATGTCGATCGATGGGAACGCGTGCGGCGGGC AGCATCGCCACATTGTACGGATGGATAACGTTTCGGACAAGTTTTTGCTA AGGACATACCTGGTACCAGGTTTGTAATTGTTTTCATTTGCAGACGTTTT AATCGCGCTATCGCACAGATTTCTCTTAACAGAGCTGCTGATATTATTAT CCGCTCCAAGGTGTTCTCCGAGTCGTCCAACCACTGCGGCCTGAGGCACG AAGATGCCGCAGGGGTGGCGTGCAGCGCCGAGGGAATGCGAAAGGGTGCC GTGTACGCCGACGTCGCTGAGGGTGGTAAGTACAATACGTCAATCCAACC CTGTGCGGGGTGGAGAACCTTGACTCCGCACGAGAGGAACTATCGTATCA CGTCGTGTGTACCTGGTATATGGTAAGGTATCCATGACGTAGTTACATTG TATACCAATTGCTGTGTCTGGAAGTAGCTACACCAGAAAACAAATCAACT AGTTCGACGCTGCCATCCATGTGCGAAAACGTCCGCCTAAAACAAGCGGT TCTTAGTAGGATGCAGCTAGCCCTCCATGCGACTCGCCGAACACCTCACG GCGCTTCACACTTGTGTCTTCCTGGCCGGGGAAAACCCGACGTGCTCCGT CCCAGCATTGTAGGGATGCGAGGGTCGATGGTCATACGACTACGGCCATG CATGACATGAGCACATACCCTCCCCCTCTCTGCCTTCGCTCGAAACGATT TCTGGGGGGTTTCGATTTTGGGAAGGCGTGATTCATAGGTCGGGTGGGAT TGGCTCGTCTCGGTGGTTGTATTGGAGTTTGTCTTGCTTGGCGGTACCCG TCGGTGCCGGTCGGCAGGTTGGGCCTGTTGTCTTCGTCTGCTGCGTCCTA TACGGGTGACTGGCATGCGACATGGTTCACAGCCCGCCGCTTGCTTCTTG TTGCCCCAAAAAACACCCCCGCCGTCGTTTGTGTCGCGTTCGTGGCAGAG GCGCTGTTCATCCCGGAGGGGTGGTGGCACCAGATTACGTCCTCGCGCGG AACCGTCGCGGCCAACGTGTGGTTCAAGGTGATGTTATTTCATGGCCGCA GGGCTTGCTGCAGGAGGTACTGTACGCGATTCCATAGCTTCATTTCTGGC CGCAAATTTCTTGCGCAGAGGTCCGACGGGAGGTACTGTACGAGCTCATA AGCAACTGTTTTCGGATGATTTTGGTACCTTCCATCTCTCGGAATCTCGG GACAAACGGTCGATCTTTCTAGGAGCGTTGGAGCTGTAACCGTTTAGGCT CTGTACAGTGATTACGTCCTCCGAGTACTCGTTTAGATGGCAGCGCTAGC AAGGGGCGGATCTGAGCGACGAGGGGACGTCGAGAAGACGTGCGCGCCTC AATTTTTATTCTGGCACTTTTGATAGACGATCTTGATTGATTGAGACTGC TCGAAGGGCCGGCCTCAAGACACAACATTTCTGTTGTTGTAATGTTTGTA CCGTGCACGAATGTAAGCACTACCATGGTATGACCGGTTGATTATTGGTC AATTTCTTCCGAGAAAGCACGAAGGCCGTCAGTATCTACTGTTTATTCAA AACATTGCCGTGCATTTGCCGCGAGCACCGGACGCTTATTCAAAAATATC CAATTATGTTTTTGGCTTGCGCTCGTTCGGCCCGTTTTGGACACAACAGG GGCATCCTTGACAACTCTCTTCACGTTGGGCAGCCTTGCGGATCCGGAAC CAAGTGCGCATGAATGTGTCGAAGGAGCATGGCTTCCGACTCACGGTGCG GGACGGCACCCTGGCCATCCCCACCGCTCCGATAACAAGTGCAGAGAATG TTGTAGAGTTCAAGTGCGAAAATGACAGCAATCTTTAACCGGCAATAAAT AAGCTGCCGGTCTGCGGAGATCCAGTTTCCCGAGAAAACTCCCCTCAATC ATGGTACAGGTCACAGCCAACACCATCTCGAGAACATTTAAGGCATGCCT TGTGCATACCCCAAAAATACGACTGTGGCGAACCCGTTGAATACCGCATC GGTTGACGCGCTACTTGATAATTGTTGTTTTGAAGTCCTTGTCGTGTCGA AGTTATCACACCCCGCCACAAAATCGTTGGTCTGCGTTTGTTTGGTCTGC AGCCGGCGGCGTTGGGCTGCCTCAAGGGTTTTATATAATACATCTAGACC AAAAGTGGTCTTCGGCCAAATAAGAGCTGAAGCGTCACTACCTTCTCGCT GAGTTGTTGTCTCCGTTCTTCGACGTAAACTCGAAACTCAATTCCAGGTG GTAGTGCGTGAGGACGAAGCCGAAGCGGGTGCACACTCGAGTCAAACGTC CGTGATCACCAGAGGGAAACAGACATGCGCAACAGTCCACGATGCTACCA ATTATAGTTTTTGGGGAGGGAATTCAATCCCGCTAGTATTTTTGCGGGAA GAGACGAAAAAAAAGCATGGTTTGGATGGGAAGCGAGACAAGTGCCGAGG AGTTTTTGTCCTCGTTCCGGTAGCGTTTGGCACTGGAAGAACGGCTGGCT CACTCTAGCTACGGAACGAGGACACAAGTACCTTGACATCTGTCGCGTAT CTCGCCCCAGAGCATGCCTTCTTTTTGAACTCTTGCGTGAAAGTGATCAG CGGAATAGTTTTTGGCCTCAAAATCTCAAAGTGCTGCAAGCCGTGAACCG CTGCGCCCATGTGTACGTTCCCCACTTCCCACTGGTGCTCACGCGATTTT GACTCGAACTGCACGCCTCCGGCTTTATCCTCGCGAACGAGCACCTCAAG GAACAGAGACATGAAACTCGCGAGGAGTTAGTCCCGCTTCAGCTCTTACT TTGTCTAAGACCACCACTGGACTAGATGCATATTGATAGTAAAAGCCCCT TAAACCAGTAGAACGCCGCCAAATCCACACGAAACAACCGCAGACCATGA TTTCTTAGCGGGGTATGATAACTTCGATGTGACAATATGGTTTCAAATCA ACAATATCAAGTACATGGCACGTCACCCGATACTGTATTCACGGGTTCGC CACATTCGTATTGTTTGGCCATGCCTGTTTGTTTTTCGATATATGGTGTT GCCTGTGTCTTCCACCAAAAAAAACATGAAGAAACGTTTCTCCTGAAACT GGGTCCCCGCAGGCCAGCAGTTATTTTGTCGTCAGGTAGCAATTGCTGTC ACGTTCGCACTAGACGATTAGAGCAATCTCTTCGCCTGTTATTGGACCGA TGGGGCTGGGTAGGCTGCCGTCCCTCACCGTAAGTCGGAAGCCATGCTCT TTGGACTCATTCATGTGCACTTTGTGCCGGATCGACAAGGCTGGCCAATA TGAAGGGTGTGGGCGCCATTTGTGGCCAAAACGGGCTGAACGATCGCACA CCAAAAGGCATACTTTCATATTTATGAATAGACATCACAGGTGGCAGGGA CCCCCCCCTTGCACAATGTGGGCGTAAACAAATCCTTGTGGAGACATCGA ACAGTGTAGCAAATCCCACAAGATGTCGAAAGCCTCTCGATTCGGTACGC CTAAACGGGTGCCACATTGTTCGATGTCCCCACATGGATTTTTTTACGCC CACATTGCGCAAGGGAGAAGTCCCGACTACCTGTGATGATATGTTAAATT ATGAACTACCGCTTTTTGGACCGAGGTGCAACGACGATCAACGAACCGTG CAGTAGTAATGTGAGTGTATATGCAGCAAGTACAAGTACTGTAGTTGGCA TGCTCTGCGCGAATCGGTCACCTACTTGCGTTGTAGTTCGGGTATCAAAC GATCGGCATGCCCTAAGAACCCTGACCCTGGCCCGCTCTGAGTTCCGGTA GCTTCCCGAAACAGTACGTACTTCAAGGCGTCGTTTTTGTTCGCTGGCCA ATCAGAACTGAGTATCGCTCGGTCCGCTCTTTTGTACACTAGCTTCCCGG CCTATCACCAACAAGAATTTTATTCAGTATAAACGTCAATACGCTGTTGT TAATTGTCGTTGTACACTGGCCAATCAGACTCGAGTATCCAGCAGCCCGG GTTGCTTGGTTTGGTCGACGCTGTACTATCCGTTGCATCAGTCAATTTGC TTTGATTGTCAAGTCACCAAAGAGTTCATGTGCGTATTTGTCCGCCGCTC CAGCCAAACGCAGGGCATTGTTTTGAATAGTCACTGACGGTGCTCGTTTC TTCGCAACCGACTGGCTCGAAACTGACCCATTATACCATGGTGGTGAATG CAATCGCGCACGGTCCAATCTCGTGACATTGCAATTATTGCACCCTGGTA AAGCTCTGCAAGATGAAGCAACGTCGCAAAAACGCACAAGCAGTATAGCA ATTCGCCATCACTGAGGTAATTATGGGGCTATGCGCACCCCAAAATGGGT CCCTTTGTTGTCCTGTGTGGTTATCTACTCCCGTCATCCTCTTTTGCAAG CGTCGGCGCCGTCTTATCCCACCACCACCACGACAACAGCAGCAGTTTCC TCACGCGCGAGGCAAGCGTTCTCCCAGCATACAGATGCCTCTCTCACCAC GGGGGAATCACAACCACCTTAGAAAATATTACCCCCTCCCCCCCCTACTT GGCTGTCCCCCTCTGGCTCCGCAAGGGGGTTCGACCGGCGCTGTGCGAGG GCCCCTCTAGGCACATGCGGGAGTACTACTTGAGGTGTCTCGTGGGATCG CTGCTTGCTGACCGACTGCGCGAGGCTGTTACGGACGACGAGAGAGGTGA GAAGTTGCCCCGCAGCGGATTTGATGGAGAAAGCCGCGGGGCGAAACACG ACCACGCGACGTTGATTTTCGGGCGTTGCTATGATGGCTACTCAGGTCGT TGCTGTAATGTAAGAGTATGAGTCTTTGTTTGAATGTCACCGGTGCTGGT GTCGTTGCCCCTCGTTTCCAGGCCTGGCACTACTGTTTGATTCGTTAGTG ATGACTGCACCTCAAAGCACTAGACCTCGCAAGCATGGGATGCTATAATA TATACCTGGGATTTTGCTATTGATATGTCGCAGACATCTGTTCTGTTGGC CACCTTCTCCCCTCCTCCTGCTGTCTTCCATGTTGCTCAGCTTTTACGCA CCAAGCACGCATTAGGTACCCCGTGTGCTGGCCCCAAATGTAGCCTCCAC ATGTTAACCGCCATGTGTTCTTCCGCGCAATCTTCCCCCGCCTCCGCTGC ACGAAGGGCTCGACACCGCGGGAAGAGTGACCGGGAACAAACGACCAAGA CCGCCACCCCCGGCGATCGAGATGTCGCCCCTCAGCGCTCCAACGTCTAC GGCTGAAGAGCGAAACGCGTATCTCAGGACGATCGGGACCGACCGCATGA AAGAAGTGAGTCCTGTAGCGGCTTTAGCACAACCATGGGATGAGCGAGGT TACTACCGGTAGGGAGTGCTCATGTTTCGATTTTTTTGCGTTGGGCTGCA TACCGCTCGGCCCCTGACTAAGATGAAGGGCCGAACAGGAGGTAGAGGTG GACTAAAATGCGAGTTTGAAGCTGCTACGGTAGGGTTTCGGCACTACCCA CGCCTCCACGATGGGAAAACCCTGTATATACACTCACGCTTACCCTCGCT TGCAACACTTCTACGCTTGACAGGAGCTGCCGAGAATAGCGCTCGAGCGA CCGCCAGACTGGGCGCGGCTCGTGACAGGCCTCGACCCATTCACCTCGCA CGTGGTCACCACCAAGTGGGAAGCGGCGGGAGGGGCCGCAAAAATGCCGG AGTTCTACGAAGCCATCTTTGGGAGCGTTGAGAAAAGAGCGGGGGCGGGG AACGTCGATGGTGGCGCAGGCGGCGGTATCGCGGCCGGCACCGAAGAGGT TGGGGTCGGTGACGGCGTCGGTGGCGATGTGGGGGGCGGAGTGGAGGGAG CAACGGCGGAGGCCGTGATGAATGCGGCGTTTGGAGACCGCAGTATAGAG GACGCTACACAGCTGCAACAGCCACAGCAGTTGGCGCAACATGTCGTCGG CGCCGATGCCGGGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAG CAGCAGCGGCAGCAGCTGCGGCGGCAACGGGGCGAGGTTTTCGTCGGGAT GAAGCGTTTTGCGGCATTGCTCTTCAAGAGAGGCTTGTGCGCTTGAGGGA GATGTTCGCACAAGAGCAATGTGGGAAGATTTTGAACGGAGCCGTTGGGT GGTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1179:12181..20935-

>mRNA_M-pyrifera_M_contig1179.3702.1 ID=mRNA_M-pyrifera_M_contig1179.3702.1|Name=mRNA_M-pyrifera_M_contig1179.3702.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3348bp|location=Sequence derived from alignment at M-pyrifera_M_contig1179:12181..20935- (Macrocystis pyrifera P11B4 male)
GTCGTGCGCTGGCGCGACGTGGGCCACGAGGGTGTGATGGCTTTTATGGC
GCCGCTGCTGGCGGAAAATCGTCCCCTTTTAATGTCCGGGTATTGGACTC
ACCAGGTGCTGTGCAAGGACGCAGCCCAGCGGTGGAGGACTTTCGCGGGG
ATCAAGTCGGTCTTGTCTAGCCACGGATTGGATCAGCTCAGTCGTGCGCT
GGCGCGACGTGGGCCACGAGGGTGTGATGGCTTTTATGGCGCCGCTGCTG
GCGGAAAATCGTCCCCTTTTAATGTCCGGGTATTGGACTCACCAGGTGCT
GTGCAAGGACGCAGCCCAGCGGTGGAGGACTTTCGCGGGGATCAAGTCGG
TCTTGTCTAGCCACGGATTGGATCAGCTCAGGGTGGACGTCTCCTGCACC
AAAAAGGGGCACTCATTTCGTGGGGATCAAGCCAATCGGCAGCACGTCAG
CCTAAGGTTGTTGGACATGGTGGAGCTGGCAGAGGCAAACGAAGCGGGGC
AGCCGCACTGGGCAGCGGCGGAGGGGTGGACGTCTCCTGCACCAAAAAGG
GGCACTCATTTCGTGGGGATCAAGCCAATCGGCAGCACGTCAGCCTAAGG
TTGTTGGACATGGTGGAGCTGGCAGAGGCAAACGAAGCGGGGCAGCCGCA
CTGGGCAGCGGCGGAGGAAGTTGGACTGGACTATTATTTATGCCAGTGCC
CTGTGATTTCCAGAGAGTTGGAAAAGCCGGAGGTGTTGAGCGCCGTCGCG
GGGGAGTTCCGCACGAAGTTGGACTGGACTATTATTTATGCCAGTGCCCT
GTGATTTCCAGAGAGTTGGAAAAGCCGGAGGTGTTGAGCGCCGTCGCGGG
GGAGTTCCGCACGCCTTCGTGTGTCTTGGAAGAAGACCTACTTCAGATCA
ATCTGTGGCTGGGGGCGATGGAGACGACGACCAATATGCACTACGACGCC
AACCACAACCTTCTGTTCGTGCTGAAGGGGAGCAAGAGGGTGGCCCTCCT
GCCGCCCGATATGACCGGCGGGGTGCATGCCATGCCGGCCTTCGTGTGTC
TTGGAAGAAGACCTACTTCAGATCAATCTGTGGCTGGGGGCGATGGAGAC
GACGACCAATATGCACTACGACGCCAACCACAACCTTCTGTTCGTGCTGA
AGGGGAGCAAGAGGGTGGCCCTCCTGCCGCCCGATATGACCGGCGGGGTG
CATGCCATGCCGGTGTTCTCCGAGTCGTCCAACCACTGCGGCCTGAGGCA
CGAAGATGCCGCAGGGGTGGCGTGCAGCGCCGAGGGAATGCGAAAGGGTG
CCGTGTACGCCGACGTCGCTGAGGGTGGTGTTCTCCGAGTCGTCCAACCA
CTGCGGCCTGAGGCACGAAGATGCCGCAGGGGTGGCGTGCAGCGCCGAGG
GAATGCGAAAGGGTGCCGTGTACGCCGACGTCGCTGAGGGTGAGGCGCTG
TTCATCCCGGAGGGGTGGTGGCACCAGATTACGTCCTCGCGCGGAACCGT
CGCGGCCAACGTGTGGTTCAAGAGGCGCTGTTCATCCCGGAGGGGTGGTG
GCACCAGATTACGTCCTCGCGCGGAACCGTCGCGGCCAACGTGTGGTTCA
AGGGGGTTCGACCGGCGCTGTGCGAGGGCCCCTCTAGGCACATGCGGGAG
TACTACTTGAGGTGTCTCGTGGGATCGCTGCTTGCTGACCGACTGCGCGA
GGCTGTTACGGACGACGAGAGAGGTGAGAAGTTGCCCCGCAGCGGATTTG
ATGGAGAAAGCCGCGGGGCGAAACACGACCACGCGACGGGGTTCGACCGG
CGCTGTGCGAGGGCCCCTCTAGGCACATGCGGGAGTACTACTTGAGGTGT
CTCGTGGGATCGCTGCTTGCTGACCGACTGCGCGAGGCTGTTACGGACGA
CGAGAGAGGTGAGAAGTTGCCCCGCAGCGGATTTGATGGAGAAAGCCGCG
GGGCGAAACACGACCACGCGACACCGCCACCCCCGGCGATCGAGATGTCG
CCCCTCAGCGCTCCAACGTCTACGGCTGAAGAGCGAAACGCGTATCTCAG
GACGATCGGGACCGACCGCATGAAAGAAACCGCCACCCCCGGCGATCGAG
ATGTCGCCCCTCAGCGCTCCAACGTCTACGGCTGAAGAGCGAAACGCGTA
TCTCAGGACGATCGGGACCGACCGCATGAAAGAAGAGCTGCCGAGAATAG
CGCTCGAGCGACCGCCAGACTGGGCGCGGCTCGTGACAGGCCTCGACCCA
TTCACCTCGCACGTGGTCACCACCAAGTGGGAAGCGGCGGGAGGGGCCGC
AAAAATGCCGGAGTTCTACGAAGCCATCTTTGGGAGCGTTGAGAAAAGAG
CGGGGGCGGGGAACGTCGATGGTGGCGCAGGCGGCGGTATCGCGGCCGGC
ACCGAAGAGGTTGGGGTCGGTGACGGCGTCGGTGGCGATGTGGGGGGCGG
AGTGGAGGGAGCAACGGCGGAGGCCGTGATGAATGCGGCGTTTGGAGACC
GCAGTATAGAGGACGCTACACAGCTGCAACAGCCACAGCAGTTGGCGCAA
CATGTCGTCGGCGCCGATGCCGGGGCAGCAGCGGCGGCGGCGGCGGCGGC
GGCAGCAGCAGCAGCAGCGGCAGCAGCTGCGGCGGCAACGGGGCGAGGTT
TTCGTCGGGATGAAGCGTTTTGCGGCATTGCTCTTCAAGAGAGGCTTGTG
CGCTTGAGGGAGATGTTCGCACAAGAGCAATGTGGGAAGATTTTGAACGG
AGCCGTTGGGTGGTGAGAGCTGCCGAGAATAGCGCTCGAGCGACCGCCAG
ACTGGGCGCGGCTCGTGACAGGCCTCGACCCATTCACCTCGCACGTGGTC
ACCACCAAGTGGGAAGCGGCGGGAGGGGCCGCAAAAATGCCGGAGTTCTA
CGAAGCCATCTTTGGGAGCGTTGAGAAAAGAGCGGGGGCGGGGAACGTCG
ATGGTGGCGCAGGCGGCGGTATCGCGGCCGGCACCGAAGAGGTTGGGGTC
GGTGACGGCGTCGGTGGCGATGTGGGGGGCGGAGTGGAGGGAGCAACGGC
GGAGGCCGTGATGAATGCGGCGTTTGGAGACCGCAGTATAGAGGACGCTA
CACAGCTGCAACAGCCACAGCAGTTGGCGCAACATGTCGTCGGCGCCGAT
GCCGGGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGC
GGCAGCAGCTGCGGCGGCAACGGGGCGAGGTTTTCGTCGGGATGAAGCGT
TTTGCGGCATTGCTCTTCAAGAGAGGCTTGTGCGCTTGAGGGAGATGTTC
GCACAAGAGCAATGTGGGAAGATTTTGAACGGAGCCGTTGGGTGGTGA
back to top