mRNA_M-pyrifera_M_contig117665.3648.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: A0A6F9DPH4_9ASCI (Prefoldin subunit 2-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DPH4_9ASCI) HSP 1 Score: 55.5 bits (132), Expect = 5.480e-8 Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 1 RRVSEQMSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDKAKARLAFQTKY 204
R V + +S + G RKCYR +GDVLVE +V +LP + K RE I L E L K L +K K F+ K+
Sbjct: 40 RAVIDALSEVSGNRKCYRLIGDVLVERTVGDVLPALTKNREQISMLTEDLNKQLAEKGKELNDFRQKH 107
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: A0A2G8KD47_STIJA (Putative prefoldin subunit 2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KD47_STIJA) HSP 1 Score: 54.3 bits (129), Expect = 8.520e-8 Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 1 RRVSEQMSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDKAKARLAFQTKY 204
R V E + +DGERKC R VG +LVE +V +LP +E +E I+KL+E L K ++ K+ ++ KY
Sbjct: 14 RLVIETLKEVDGERKCCRLVGGILVERTVQEVLPALEHNKEQIQKLIESLGKQIQSKSAELTEYREKY 81
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: A0A7S4NTF0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NTF0_GUITH) HSP 1 Score: 54.3 bits (129), Expect = 9.460e-8 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 7 VSEQMSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDKAKARLAFQTKY 204
V E +S M+GERKCYR VG VL E +VST+LP V++ + ++ L + L L+ K K FQ K+
Sbjct: 38 VVETLSKMEGERKCYRMVGGVLTERTVSTVLPAVKENMDKLQALCDDLYARLQKKEKEMQEFQAKH 103
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: A0A383W5V6_TETOB (Uncharacterized protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383W5V6_TETOB) HSP 1 Score: 54.3 bits (129), Expect = 1.500e-7 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 7 VSEQMSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDKAKARLAFQTKY 204
V +Q+ MD R+CYR +GDVLVE +V+ LP V++ RE + +++QL+ L + KA AFQ +Y
Sbjct: 43 VLKQLEPMDKGRRCYRMIGDVLVERTVAETLPAVQRNREGLGNVMKQLQAQLEAQQKALAAFQQQY 108
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: A0A2G8JNW9_STIJA (Putative prefoldin subunit 2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JNW9_STIJA) HSP 1 Score: 54.3 bits (129), Expect = 1.640e-7 Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 1 RRVSEQMSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDKAKARLAFQTKY 204
R V E + +DGERKC R VG +LVE +V +LP +E +E I+KL+E L K ++ K+ ++ KY
Sbjct: 48 RLVIETLKEVDGERKCCRLVGGILVERTVQEVLPALEHNKEQIQKLIESLGKQIQSKSAELTEYREKY 115
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: A0A8J9WQS5_9CHLO (Probable prefoldin subunit 2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WQS5_9CHLO) HSP 1 Score: 52.8 bits (125), Expect = 1.880e-7 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 28 MDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDKAKARLAFQTKY 204
MDG+RKCYR VG++LVE +V+ ++P V+ +E ++ ++E+L K L K K FQ KY
Sbjct: 1 MDGDRKCYRVVGEILVERTVAEVVPAVKGNKEQLDTIVERLVKQLDTKKKELSDFQEKY 59
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: E1ZGR3_CHLVA (Uncharacterized protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGR3_CHLVA) HSP 1 Score: 52.4 bits (124), Expect = 5.430e-7 Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 7 VSEQMSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDKAKARLAFQTKY 204
V + + +D ERKC+R VG+VLVE +V+ +LP V+K R+ + L+ +K L K K LA+Q +Y
Sbjct: 39 VIKTLEPLDAERKCFRLVGEVLVERTVADVLPAVKKTRDGLAGLVSTYEKQLAAKQKEVLAYQQRY 104
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: I0ZB07_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZB07_COCSC) HSP 1 Score: 51.2 bits (121), Expect = 2.020e-6 Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 7 VSEQMSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDKAKARLAFQTKY 204
V + + MDG+RKCYR VG++LVE +V+ + P V+ +E ++ ++E+L K L K K FQ +Y
Sbjct: 43 VLKALEPMDGDRKCYRVVGEILVERTVAEVKPAVKGNKEQLDAVVERLLKQLEVKKKDLSDFQERY 108
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: A0A0C9SA75_AMBAM (Putative molecular chaperone prefoldin subunit 2 (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9SA75_AMBAM) HSP 1 Score: 50.1 bits (118), Expect = 3.600e-6 Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 7 VSEQMSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDK 171
V+E + +DG+R+CYR VG VLVE +V ILP VE+ RE + K +E + + + D+
Sbjct: 55 VAEALQKVDGDRRCYRMVGGVLVERTVKDILPAVERNRENLSKSVELMNEKIVDR 109
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Match: A0A059LKJ3_9CHLO (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LKJ3_9CHLO) HSP 1 Score: 50.4 bits (119), Expect = 4.150e-6 Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 7 VSEQMSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDKAKARLAFQTKY 204
V + + +D +R+C+R +GDV+VE S T+LPEV + R + L++ ++ L +K + LAFQ KY
Sbjct: 42 VIKTLEKVDDDRRCHRLIGDVMVERSKKTVLPEVVENRNNLAALVKTYEEKLEEKQREVLAFQKKY 107 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117665.3648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117665.3648.1 >prot_M-pyrifera_M_contig117665.3648.1 ID=prot_M-pyrifera_M_contig117665.3648.1|Name=mRNA_M-pyrifera_M_contig117665.3648.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp MSTMDGERKCYRRVGDVLVEGSVSTILPEVEKAREMIEKLLEQLKKDLRDback to top mRNA from alignment at M-pyrifera_M_contig117665:350..553+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117665.3648.1 ID=mRNA_M-pyrifera_M_contig117665.3648.1|Name=mRNA_M-pyrifera_M_contig117665.3648.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=204bp|location=Sequence derived from alignment at M-pyrifera_M_contig117665:350..553+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117665:350..553+ >mRNA_M-pyrifera_M_contig117665.3648.1 ID=mRNA_M-pyrifera_M_contig117665.3648.1|Name=mRNA_M-pyrifera_M_contig117665.3648.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig117665:350..553+ (Macrocystis pyrifera P11B4 male)back to top |