mRNA_M-pyrifera_M_contig117514.3627.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: K3WZ97_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WZ97_GLOUD) HSP 1 Score: 130 bits (327), Expect = 1.850e-35 Identity = 58/128 (45.31%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 1 NLCCFRS--GCAPMWEDFPRGGCWILKVRRGDRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMY 378
NL FR CAPMWE FP+GGCWILK+++ ++ G++WQ+L+FAAIGE VVG+ +A R+++DML+VW D+ D + RF + E+LK+ L L +++EYK H S+++ S FRNA +++
Sbjct: 76 NLYLFRDQPNCAPMWEAFPQGGCWILKIKK---KANVLGKMWQDLVFAAIGEVFASRDVVGIAMAIRSKEDMLSVWNADNSDDSTRFEIGEKLKEILMLDSNTLIEYKFHANSIRDMSTFRNAKPYVF 200
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: F0W9A8_9STRA (Eukaryotic initiation factor 4E putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9A8_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.910e-35 Identity = 59/132 (44.70%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 1 NLCCFRS--GCAPMWEDFPRGGCWILKVRRGDRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMYVDKS 390
NL FR CAPMWE FP GGCWILK+++ ++ G++WQ+L+FAAIGE G VVG+ +A R+++DML+VW D+ + + RF + E+LK+ L L +++EYK H S+++ S FRNA ++++ S
Sbjct: 73 NLYMFRDLPKCAPMWEAFPHGGCWILKIKK---KANVLGKMWQDLVFAAIGELFGQANVVGIAMAIRSKEDMLSVWNADNSEDSVRFSIGEKLKEILMLDPNTLIEYKFHANSIRDMSTFRNAKSYVFATTS 201
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: A0A067BS98_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BS98_SAPPC) HSP 1 Score: 128 bits (321), Expect = 1.440e-34 Identity = 57/128 (44.53%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1 NLCCFRSG--CAPMWEDFPRGGCWILKVRRGDRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMY 378
NL FR CAPMWE FP GGCWILK+++ ++ G++WQ+L FAA+GE VVG+ +A R+++DM++VW D+ D +ARF + E+LK+ L L +++EYK H S+++ S FRNA +++
Sbjct: 75 NLYLFRDAPNCAPMWEAFPNGGCWILKIKK---KANVLGKMWQDLCFAAVGEAFETLNVVGIAMAIRSKEDMISVWNADNTDDSARFAIGEKLKELLMLDSNTLIEYKFHSNSIRDMSTFRNAKPYVF 199
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: D0N871_PHYIT (Eukaryotic initiation factor 4E, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N871_PHYIT) HSP 1 Score: 128 bits (321), Expect = 1.560e-34 Identity = 59/128 (46.09%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1 NLCCFRS--GCAPMWEDFPRGGCWILKVRRGDRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMY 378
NL FR CAPMWE FP+GGCWILK+++ ++ G++WQ+L+FAAIGE VVG+ +A R+++DML+VW D+ D RF + E+LK+ L L ++VEYK H S+++ S FRNA +++
Sbjct: 73 NLYLFRDQPNCAPMWEAFPQGGCWILKIKK---KANVLGKMWQDLVFAAIGEAFEQLDVVGIAMAIRSKEDMLSVWNADNSDDNTRFAIGEKLKEILMLDSNTLVEYKFHANSIRDMSTFRNAKPYVF 197
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: W2PGT1_PHYPN (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=W2PGT1_PHYPN) HSP 1 Score: 128 bits (321), Expect = 2.050e-34 Identity = 59/128 (46.09%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1 NLCCFRS--GCAPMWEDFPRGGCWILKVRRGDRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMY 378
NL FR CAPMWE FP+GGCWILK+++ ++ G++WQ+L+FAAIGE VVG+ +A R+++DML+VW D+ D RF + E+LK+ L L ++VEYK H S+++ S FRNA +++
Sbjct: 83 NLYLFRDQPNCAPMWEAFPQGGCWILKIKK---KANVLGKMWQDLVFAAIGEAFEQLDVVGIAMAIRSKEDMLSVWNADNSDDNTRFAIGEKLKEILMLDSNTLVEYKFHANSIRDMSTFRNAKPYVF 207
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: H3GYW7_PHYRM (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3GYW7_PHYRM) HSP 1 Score: 128 bits (322), Expect = 2.200e-34 Identity = 58/128 (45.31%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 1 NLCCFRS--GCAPMWEDFPRGGCWILKVRRGDRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMY 378
NL FR CAPMWE FP+GGCWILK+++ ++ G++WQ+L+FAA+GE VVG+ +A R+++DML+VW D+ D + RF + E+LK+ L L ++VEYK H S+++ S FRNA +++
Sbjct: 99 NLYLFRDQPNCAPMWEAFPQGGCWILKIKK---KANVLGKMWQDLVFAALGEAFEELDVVGIAMAIRSKEDMLSVWNADNSDDSTRFAIGEKLKEILMLDSNTLVEYKFHANSIRDMSTFRNAKPYVF 223
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: D0P4V5_PHYIT (Eukaryotic initiation factor 4E, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0P4V5_PHYIT) HSP 1 Score: 128 bits (321), Expect = 2.730e-34 Identity = 59/128 (46.09%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1 NLCCFRS--GCAPMWEDFPRGGCWILKVRRGDRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMY 378
NL FR CAPMWE FP+GGCWILK+++ ++ G++WQ+L+FAAIGE VVG+ +A R+++DML+VW D+ D RF + E+LK+ L L ++VEYK H S+++ S FRNA +++
Sbjct: 94 NLYLFRDQPNCAPMWEAFPQGGCWILKIKK---KANVLGKMWQDLVFAAIGEAFEQLDVVGIAMAIRSKEDMLSVWNADNSDDNTRFAIGEKLKEILMLDSNTLVEYKFHANSIRDMSTFRNAKPYVF 218
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: A0A024TXL0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TXL0_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.130e-33 Identity = 57/128 (44.53%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 1 NLCCFRS--GCAPMWEDFPRGGCWILKVRRGDRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMY 378
NL FR CAPMWE FP GGCWILK+++ ++ G++WQ+LLFA IGE VVG+ +A R+++DM++VW D+ D RF + E+LK+ L L +++EYK H S+++ S FRNA +++
Sbjct: 72 NLYLFRDQPNCAPMWEAFPNGGCWILKIKK---KANVLGKMWQDLLFAVIGEAFETLNVVGIAMALRSKEDMISVWNADNSDDNIRFAIGEKLKEILMLDSNTLIEYKFHANSIRDMSTFRNAKPYVF 196
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: D7FIH1_ECTSI (Eukaryotic translation initiation factor 4E like2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH1_ECTSI) HSP 1 Score: 125 bits (315), Expect = 2.180e-33 Identity = 55/130 (42.31%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 1 NLCCFRS--GCAPMWEDFPRGGCWILKVRR--GDRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMY 378
N+ FR G PMWE +P GGCWIL++R+ G +S G++WQ+L+ A +GE VVG+ +A R+R+D+L+VW D+ + RF + ERLK+ L L ++++EYK HQ ++++ S FRNA A+ +
Sbjct: 86 NVYLFRDERGHVPMWERYPNGGCWILRIRKKSGQTNTSVLGKMWQDLVLAVVGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRNAKAYCF 215
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Match: A0A7S1CD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD67_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.430e-33 Identity = 59/127 (46.46%), Postives = 81/127 (63.78%), Query Frame = 1
Query: 1 NLCCFRSGCAPMWEDFPRGGCWILKVRRG-DRTSSPTGRLWQELLFAAIGEQLGGHQVVGVQLAARARDDMLAVWTRDDQDYAARFGVSERLKKCLGLADASVVEYKPHQRSLKEKSGFRNADAFMY 378
N FR G PMWE +P GGCWI+K+RR D + +LWQ+L+F IGEQ VVG+ LA R ++DML+VW D A RF + E LK+ L L +++EYK H RS+++KS + NA A++Y
Sbjct: 111 NYYMFREGDFPMWESYPEGGCWIIKIRRSSDASGGVLSKLWQDLVFGTIGEQFKEPSVVGITLARRPKEDMLSVWNSDGSP-AVRFSIGEELKRILALEPGTMIEYKFHSRSMQDKSTYSNAQAYVY 236 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117514.3627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117514.3627.1 >prot_M-pyrifera_M_contig117514.3627.1 ID=prot_M-pyrifera_M_contig117514.3627.1|Name=mRNA_M-pyrifera_M_contig117514.3627.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp NLCCFRSGCAPMWEDFPRGGCWILKVRRGDRTSSPTGRLWQELLFAAIGEback to top mRNA from alignment at M-pyrifera_M_contig117514:1..420+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117514.3627.1 ID=mRNA_M-pyrifera_M_contig117514.3627.1|Name=mRNA_M-pyrifera_M_contig117514.3627.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig117514:1..420+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117514:1..420+ >mRNA_M-pyrifera_M_contig117514.3627.1 ID=mRNA_M-pyrifera_M_contig117514.3627.1|Name=mRNA_M-pyrifera_M_contig117514.3627.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig117514:1..420+ (Macrocystis pyrifera P11B4 male)back to top |