mRNA_M-pyrifera_M_contig11745.3607.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: A0A6H5KU30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU30_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.410e-31 Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPALLDLSELGMVRVTSRVYDLDWLEGLDLSRNRLMRMSPDLAGMDNLVDLDLRHNR 237
RN+PRSKAQRLVDEAEDSV GARP +LDLS+L M RVTSRVY LDWL+ LDLS NRL R+S DLAGM+NLVD++ RHNR
Sbjct: 317 RNFPRSKAQRLVDEAEDSVDGARPEILDLSKLDMDRVTSRVYRLDWLQRLDLSNNRLYRISSDLAGMENLVDVNFRHNR 395
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: D8LE76_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE76_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 1.040e-16 Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPALLDLSELGMVRVTSRVYDLDWLEGLD 153
RN+PRSKAQRLVDEAEDS+ GARP +LDLS+L M RVTSRVY LDWL+ LD
Sbjct: 300 RNFPRSKAQRLVDEAEDSIDGARPEILDLSKLDMDRVTSRVYRLDWLQRLD 350
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: A0A1V9YMR4_9STRA (WW domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMR4_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.390e-8 Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPAL-LDLSELGMVRVTSRVYDLDWLEGLDLSRNRLMRM 180
RNYPRSKAQ +VD AED PAL LD+S L ++VT RV++LD LE L L NRL R+
Sbjct: 185 RNYPRSKAQLIVDAAEDLELENTPALELDMSNLQALKVTGRVWNLDNLERLILKDNRLTRI 245
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: A0A485LRK3_9STRA (Aste57867_24842 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRK3_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.600e-8 Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPAL-LDLSELGMVRVTSRVYDLDWLEGLDLSRNRLMRMSPDLAGMDNLVDLDLRHN 234
R +PRSKAQ +VD AED+ L L+L +LG R++SRV++L+ L+ L LSRN+L R+ + + L LD+ HN
Sbjct: 240 RRFPRSKAQLIVDAAEDAELDDVAVLELELRDLGAARISSRVWNLEHLQRLVLSRNKLTRLPSAIQDLTAL--LDVSHN 316
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: A0A225WBH8_9STRA (TKL protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WBH8_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 8.110e-7 Identity = 29/60 (48.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPALLDLSELGMVRVTSRVYDLDWLEGLDLSRNRLMRM 180
R++PRSKAQ++VD+AED AG LLD+S L + +++SR+++L +L+ L LS N L R+
Sbjct: 206 RSFPRSKAQQIVDDAED--AGKNVQLLDMSGLDVWKLSSRIWNLQFLKKLVLSNNFLTRI 263
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: A0A7S3NJI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJI6_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 1.190e-6 Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPALLDLSELGMVRVTSRVYDLDWLEGLDLSRNRLMRMSPD 189
R +PRSK Q LVD AED+ GA +L LG+ +++ R++ LD L LDLS N+L ++ D
Sbjct: 23 REWPRSKVQTLVDIAEDNPNGATELIL--KNLGLTKLSFRIFALDTLRVLDLSENKLCKLPKD 83
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: G4ZH24_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZH24_PHYSP) HSP 1 Score: 53.9 bits (128), Expect = 1.520e-6 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPALLDLSELGMVRVTSRVYDLDWLEGLDLSRNRLMRM 180
R YPRSKAQ +VD AED AG+ LLD+S L +++SR+++L +L+ L LS N L R+
Sbjct: 257 RKYPRSKAQLIVDAAED--AGSNAQLLDMSGLDAWKLSSRIWNLQFLKKLVLSHNCLTRI 314
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: A0A5D6YFK4_9STRA (Leucine-rich repeat and WD repeat-containing protein 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFK4_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 2.860e-6 Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPALLDLSELGMVRVTSRVYDLDWLEGLDLSRNRLMRM 180
R PRSKAQ VDEAED AG A LDLS L +++SR+++L +L L LS+N+L R+
Sbjct: 716 RRLPRSKAQARVDEAED--AGKDGAELDLSALNAWKLSSRIWNLQYLRTLVLSKNQLSRI 773
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: A0A662XK62_9STRA (WW domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XK62_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 7.250e-6 Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPALLDLSELGMVRVTSRVYDLDWLEGLDLSRNRLMRM 180
R +PRSKAQ+LVD AED AG + L+L L +V+SRV++L +L L L+ N L R+
Sbjct: 193 RRFPRSKAQQLVDAAED--AGDQAETLELQGLNAFKVSSRVWNLQFLRTLSLAHNLLARI 250
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Match: A0A8J5LZC2_9STRA (SNRNP27 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5LZC2_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 1.350e-5 Identity = 28/60 (46.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 1 RNYPRSKAQRLVDEAEDSVAGARPALLDLSELGMVRVTSRVYDLDWLEGLDLSRNRLMRM 180
R YPRSKAQ++VD AED+ + LLD+S L +++SR+++L +L+ L LS N L R+
Sbjct: 275 RKYPRSKAQQIVDAAEDA---EQAQLLDMSGLDAWKLSSRIWNLPYLKKLVLSNNYLTRI 331 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11745.3607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11745.3607.1 >prot_M-pyrifera_M_contig11745.3607.1 ID=prot_M-pyrifera_M_contig11745.3607.1|Name=mRNA_M-pyrifera_M_contig11745.3607.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp RNYPRSKAQRLVDEAEDSVAGARPALLDLSELGMVRVTSRVYDLDWLEGLback to top mRNA from alignment at M-pyrifera_M_contig11745:1081..1317- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11745.3607.1 ID=mRNA_M-pyrifera_M_contig11745.3607.1|Name=mRNA_M-pyrifera_M_contig11745.3607.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=237bp|location=Sequence derived from alignment at M-pyrifera_M_contig11745:1081..1317- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11745:1081..1317- >mRNA_M-pyrifera_M_contig11745.3607.1 ID=mRNA_M-pyrifera_M_contig11745.3607.1|Name=mRNA_M-pyrifera_M_contig11745.3607.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig11745:1081..1317- (Macrocystis pyrifera P11B4 male)back to top |