mRNA_M-pyrifera_M_contig117259.3566.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: A0A0H3YJI8_SCHMD (NPHP4 n=1 Tax=Schmidtea mediterranea TaxID=79327 RepID=A0A0H3YJI8_SCHMD) HSP 1 Score: 64.7 bits (156), Expect = 2.620e-10 Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 1 QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPSPCRMQVFVFINDEEEKNEECW--LVNVQ 231
++IGF+NP+ ++ F++ + P V +K +L + + E I + F P+ CR ++FVFINDE+ KNEE + LVN Q
Sbjct: 1384 KRIGFQNPYPYQKRFYLSTDRPDLVLLKDTILTIEANQVENIGMIFVPIFQRCRQKIFVFINDEDGKNEETFALLVNYQ 1462
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: UPI0009E4A033 (nephrocystin-4-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4A033) HSP 1 Score: 63.2 bits (152), Expect = 9.140e-10 Identity = 27/79 (34.18%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 1 QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPSPCRMQVFVFINDEEEKNEECWLVNVQCT 237
+++ F NP+ +++TFH+ + P + K ++EV + I L F P P + ++F+FIND E+KNEE + +N T
Sbjct: 1539 KRVSFANPYPTKKTFHLKCNRPDLLQFKENIIEVGPGESHSIGLRFTPQQFPGKAEIFIFINDSEDKNEETFSINAVYT 1617
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: A0A1V9YT98_9STRA (Nephrocystin-4-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YT98_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 9.240e-10 Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 1 QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPSPCRMQVFVFINDEEEKNEECWLVNV 228
+KI + NPW+ R+F + SS P + + L++ +RL FA PC QV++FIND +E+NEEC L ++
Sbjct: 3403 KKISYCNPWEDNRSFMLRSSDPAVMKPREPRLQLRGNGDGFLRLAFARHSVPCTKQVYLFINDHQEQNEECLLFHL 3478
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: UPI0010A0A65A (nephrocystin-4 n=2 Tax=Murinae TaxID=39107 RepID=UPI0010A0A65A) HSP 1 Score: 61.2 bits (147), Expect = 4.350e-9 Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 1 QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPSPCRMQVFVFINDEEEKNEECWLVNV 228
++I + NP+ S RT+ + S P +H K +VA T I L F P SP + ++ ++IND+E+KNEE + V V
Sbjct: 1353 KRITYTNPYPSRRTYRLHSDRPDLLHFKEDSFQVAGGETYTIGLRFVPSGSPGQEEILIYINDQEDKNEETFCVKV 1428
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: A0A8K0AJX8_ANDGO (Conserved uncharacterized mitochondrial protein n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0AJX8_ANDGO) HSP 1 Score: 60.8 bits (146), Expect = 5.940e-9 Identity = 27/77 (35.06%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 1 QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPSPCRMQVFVFINDEEEKNEECWLVNVQ 231
+K+ ++NP+ S RTF++ SS +++ ++VA+R E I + F +V+VF+NDE+++NEEC V V+
Sbjct: 1347 KKVAYKNPYPSARTFNLFSSDESVCYMREVSMQVAAREKEYIHMVFPYGTETTPKEVYVFVNDEQDRNEECLHVKVR 1423
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: A0A836CDE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE8_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.150e-8 Identity = 27/77 (35.06%), Postives = 43/77 (55.84%), Query Frame = 1
Query: 1 QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPSPCRMQVFVFINDEEEKNEECWLVNVQ 231
++I + NPW R F + SS + + LE A+ T IRLW + +VF+F+NDE ++NEEC L+ ++
Sbjct: 130 KRIAYANPWSQARAFRLRSSDETVMAPRHGGLEAAAGGTGFIRLWLHAPDAAGSAEVFLFVNDENDQNEECLLIRMR 206
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: A0A0B7BX89_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7BX89_9EUPU) HSP 1 Score: 55.8 bits (133), Expect = 1.410e-8 Identity = 26/73 (35.62%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 4 KIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPSPCRMQVFVFINDEEEKNEECWLV 222
+I + NP+ + FH++ + K ++LE+ S S+ I L F P+ P ++ VFINDEE+KNEE + +
Sbjct: 1 RITYTNPYPVAKRFHLMCDRNDLLQFKESILEIDSGSSHPIGLRFMPVMQPGAAEIMVFINDEEDKNEETFRI 73
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: A0A2T7PTM2_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PTM2_POMCA) HSP 1 Score: 59.3 bits (142), Expect = 2.070e-8 Identity = 28/77 (36.36%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 1 QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPSPCRMQVFVFINDEEEKNEECWLVNVQ 231
++I + NP+ +TF +L+ P + K LLE+ + + I L FAP+ P ++ VFINDEE+KNEE + + +
Sbjct: 1309 KRITYTNPYPLRKTFKILTDRPDLLQFKENLLELEGGAAQPIGLRFAPVTHPGIAELLVFINDEEDKNEETFRITAE 1385
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: UPI002015542D (LOW QUALITY PROTEIN: nephrocystin-4-like n=2 Tax=Alosa TaxID=34772 RepID=UPI002015542D) HSP 1 Score: 58.5 bits (140), Expect = 3.870e-8 Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 1 QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPSPCRMQVFVFINDEEEKNEECWLVNV 228
+KI F NP+ + RTFH+LS + K +V T I L FAP SP + ++ +++N++EE NEE + V V
Sbjct: 1335 KKITFTNPYPNTRTFHLLSDRTDLLQFKEDTFQVDGGQTYSIGLRFAPSQSPGQEEILIYVNNQEELNEETFCVKV 1410
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Match: A0A0M0JYG0_9EUKA (Nephronophthisis 4 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYG0_9EUKA) HSP 1 Score: 58.2 bits (139), Expect = 5.250e-8 Identity = 28/81 (34.57%), Postives = 45/81 (55.56%), Query Frame = 1
Query: 1 QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPS----PCRMQVFVFINDEEEKNEECWLVNVQ 231
+K+ NP+ + TFH + PH + L + S+ + I L F+PLPS +V VF+N+EE+KNEEC + ++
Sbjct: 983 KKVALSNPYAYDATFHFSTDKPHLLAFSAPSLSIPSQEAKYIGLHFSPLPSGGVSDGHTRVLVFVNNEEDKNEECMEITLK 1063 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117259.3566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117259.3566.1 >prot_M-pyrifera_M_contig117259.3566.1 ID=prot_M-pyrifera_M_contig117259.3566.1|Name=mRNA_M-pyrifera_M_contig117259.3566.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp QKIGFRNPWDSERTFHVLSSAPHAVHVKTALLEVASRSTELIRLWFAPLPback to top mRNA from alignment at M-pyrifera_M_contig117259:46..288- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117259.3566.1 ID=mRNA_M-pyrifera_M_contig117259.3566.1|Name=mRNA_M-pyrifera_M_contig117259.3566.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=243bp|location=Sequence derived from alignment at M-pyrifera_M_contig117259:46..288- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117259:46..288- >mRNA_M-pyrifera_M_contig117259.3566.1 ID=mRNA_M-pyrifera_M_contig117259.3566.1|Name=mRNA_M-pyrifera_M_contig117259.3566.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig117259:46..288- (Macrocystis pyrifera P11B4 male)back to top |