mRNA_M-pyrifera_M_contig116444.3421.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: A0A364XU25_9BACT (Uncharacterized protein n=1 Tax=Chryseolinea flava TaxID=2059302 RepID=A0A364XU25_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 4.050e-6 Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 1
Query: 13 KLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEILQTN 264
KL+ L I L L++ G S +P+ VNA L+PP+SL LSDY + + + + D ++P VR R+ +S G LQTN
Sbjct: 20 KLRCLFIFL-LAIVGMSASAQTTYPIQVNANLLPPYSLYLSDYYSGTREKIAVTLVNRDQLKPTLSVRLRMIISAAGGVRLQTN 102
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: A0A364XVU4_9BACT (Fibronectin type-III domain-containing protein n=1 Tax=Chryseolinea flava TaxID=2059302 RepID=A0A364XVU4_9BACT) HSP 1 Score: 52.4 bits (124), Expect = 7.270e-6 Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 1
Query: 13 KLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEI 252
+L+ L I+LF L V Q++PV NAVLIPP+S+ +SDY + L++N+ L D P VR R+ + + V I
Sbjct: 2 RLQRLFILLFFLLAQRQV-VAQVYPVQGNAVLIPPYSVYISDYTSRTTDRLILNVALKDITRPELRVRLRIRIESQNVRI 80
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0012F9764F (fibronectin type III domain-containing protein n=1 Tax=Pedobacter sp. R20-19 TaxID=1270196 RepID=UPI0012F9764F) HSP 1 Score: 51.6 bits (122), Expect = 1.390e-5 Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 7 NFKLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEI 252
F+LK+L + LF L + S Q++PV V VL+PP+SLN SDY S+ L + +T D +P +VR R+ + ++
Sbjct: 72 TFRLKALHLALFFLLFAFS-SKAQIYPVQVMPVLVPPYSLNTSDYYNGTSERLAVVLTNTDLQKPVLNVRLRMYIEGQNTKL 152
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0018D01912 (fibronectin type III domain-containing protein n=1 Tax=Pedobacter sp. R20-19 TaxID=1270196 RepID=UPI0018D01912) HSP 1 Score: 51.6 bits (122), Expect = 1.410e-5 Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 7 NFKLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEI 252
F+LK+L + LF L + S Q++PV V VL+PP+SLN SDY S+ L + +T D +P +VR R+ + ++
Sbjct: 59 TFRLKALHLTLFFLLFAFS-SKAQIYPVQVMPVLVPPYSLNTSDYYNGTSERLAVVLTNTDLQKPVLNVRLRMYIEGQNAKL 139
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: A0A1M6JNE0_9FLAO (Fibronectin type III domain-containing protein n=1 Tax=Aquimarina spongiae TaxID=570521 RepID=A0A1M6JNE0_9FLAO) HSP 1 Score: 51.6 bits (122), Expect = 1.420e-5 Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 1
Query: 73 GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEILQTN 264
Q+FPV V+ LIPP+SLNLS+Y S+ L++N+ D E VR + + NN +Q N
Sbjct: 21 AQVFPVQVSPQLIPPYSLNLSEYATSGSEKLILNLLFTDINESNVQVRIKFFLENNAGLSVQNN 84
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0002884E5B (hypothetical protein n=1 Tax=Aquimarina agarilytica TaxID=1087449 RepID=UPI0002884E5B) HSP 1 Score: 50.4 bits (119), Expect = 1.490e-5 Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 58 WIVSF----GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNG 243
WI++F Q+FPV V LIPP+SLNLSDY + +++N+ L+D E +V + +++N
Sbjct: 9 WILAFQALQAQVFPVQVTPQLIPPYSLNLSDYQNAAREQVIVNLLLSDVTESNREVTLKFSMTNTA 74
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0015869EF4 (fibronectin type III domain-containing protein n=2 Tax=Aquimarina TaxID=290174 RepID=UPI0015869EF4) HSP 1 Score: 51.2 bits (121), Expect = 1.900e-5 Identity = 23/65 (35.38%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 73 GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNN-GVEILQTN 264
Q+FPV++ +IPP+SL LS+Y S+ L++N+ L D ++R ++ + NN G+ I T+
Sbjct: 22 AQVFPVNITPQVIPPYSLQLSEYTTSASEKLLVNLLLTDITRSNLEIRLKLYIENNAGISIQSTD 86
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0018C9ADB7 (hypothetical protein n=1 Tax=unclassified Aquimarina TaxID=2627091 RepID=UPI0018C9ADB7) HSP 1 Score: 51.2 bits (121), Expect = 1.910e-5 Identity = 23/65 (35.38%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 73 GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNN-GVEILQTN 264
Q+FPVD+ +IPP+SL LS+Y S+ +++N+ L D ++R ++ + NN G+ I T+
Sbjct: 22 AQVFPVDITPQVIPPYSLQLSEYTTSASEKVLVNLLLTDITRSNLEIRLKLYIENNAGLSIQSTD 86
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI000289DC88 (hypothetical protein n=1 Tax=Aquimarina agarilytica TaxID=1087449 RepID=UPI000289DC88) HSP 1 Score: 50.8 bits (120), Expect = 2.410e-5 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 58 WIVSF----GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNG 243
WI +F Q+FPV V LIPP+SLNLSDY + +++N+ L+D E +V + ++SN
Sbjct: 9 WIFAFQALQAQVFPVQVTPQLIPPYSLNLSDYQNAAREQVIVNLLLSDVTESNREVTLKFSMSNTA 74
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI000554C0AC (fibronectin type III domain-containing protein n=1 Tax=Aquimarina megaterium TaxID=1443666 RepID=UPI000554C0AC) HSP 1 Score: 50.8 bits (120), Expect = 2.600e-5 Identity = 24/65 (36.92%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 73 GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNN-GVEILQTN 264
Q+FPV+V +IPP+SL LS+Y S+ L++N+ L D ++R ++ + NN G+ I T+
Sbjct: 13 AQVFPVNVTPQVIPPYSLQLSEYTTSASEKLLVNLLLTDITRSNLEIRLKLYIENNAGLSIQSTD 77 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116444.3421.1 >prot_M-pyrifera_M_contig116444.3421.1 ID=prot_M-pyrifera_M_contig116444.3421.1|Name=mRNA_M-pyrifera_M_contig116444.3421.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp MINFKLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLEback to top mRNA from alignment at M-pyrifera_M_contig116444:296..559+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116444.3421.1 ID=mRNA_M-pyrifera_M_contig116444.3421.1|Name=mRNA_M-pyrifera_M_contig116444.3421.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=264bp|location=Sequence derived from alignment at M-pyrifera_M_contig116444:296..559+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116444:296..559+ >mRNA_M-pyrifera_M_contig116444.3421.1 ID=mRNA_M-pyrifera_M_contig116444.3421.1|Name=mRNA_M-pyrifera_M_contig116444.3421.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig116444:296..559+ (Macrocystis pyrifera P11B4 male)back to top |