prot_M-pyrifera_M_contig116444.3421.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116444.3421.1
Unique Nameprot_M-pyrifera_M_contig116444.3421.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length88
Homology
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: A0A364XU25_9BACT (Uncharacterized protein n=1 Tax=Chryseolinea flava TaxID=2059302 RepID=A0A364XU25_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 4.050e-6
Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 0
Query:    5 KLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEILQTN 88
            KL+ L I L L++ G   S    +P+ VNA L+PP+SL LSDY     + + + +   D ++P   VR R+ +S  G   LQTN
Sbjct:   20 KLRCLFIFL-LAIVGMSASAQTTYPIQVNANLLPPYSLYLSDYYSGTREKIAVTLVNRDQLKPTLSVRLRMIISAAGGVRLQTN 102          
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: A0A364XVU4_9BACT (Fibronectin type-III domain-containing protein n=1 Tax=Chryseolinea flava TaxID=2059302 RepID=A0A364XVU4_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 7.270e-6
Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    5 KLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEI 84
            +L+ L I+LF  L    V   Q++PV  NAVLIPP+S+ +SDY    +  L++N+ L D   P   VR R+ + +  V I
Sbjct:    2 RLQRLFILLFFLLAQRQV-VAQVYPVQGNAVLIPPYSVYISDYTSRTTDRLILNVALKDITRPELRVRLRIRIESQNVRI 80          
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0012F9764F (fibronectin type III domain-containing protein n=1 Tax=Pedobacter sp. R20-19 TaxID=1270196 RepID=UPI0012F9764F)

HSP 1 Score: 51.6 bits (122), Expect = 1.390e-5
Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 0
Query:    3 NFKLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEI 84
             F+LK+L + LF  L  +  S  Q++PV V  VL+PP+SLN SDY    S+ L + +T  D  +P  +VR R+ +     ++
Sbjct:   72 TFRLKALHLALFFLLFAFS-SKAQIYPVQVMPVLVPPYSLNTSDYYNGTSERLAVVLTNTDLQKPVLNVRLRMYIEGQNTKL 152          
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0018D01912 (fibronectin type III domain-containing protein n=1 Tax=Pedobacter sp. R20-19 TaxID=1270196 RepID=UPI0018D01912)

HSP 1 Score: 51.6 bits (122), Expect = 1.410e-5
Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 0
Query:    3 NFKLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEI 84
             F+LK+L + LF  L  +  S  Q++PV V  VL+PP+SLN SDY    S+ L + +T  D  +P  +VR R+ +     ++
Sbjct:   59 TFRLKALHLTLFFLLFAFS-SKAQIYPVQVMPVLVPPYSLNTSDYYNGTSERLAVVLTNTDLQKPVLNVRLRMYIEGQNAKL 139          
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: A0A1M6JNE0_9FLAO (Fibronectin type III domain-containing protein n=1 Tax=Aquimarina spongiae TaxID=570521 RepID=A0A1M6JNE0_9FLAO)

HSP 1 Score: 51.6 bits (122), Expect = 1.420e-5
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 0
Query:   25 GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEILQTN 88
             Q+FPV V+  LIPP+SLNLS+Y    S+ L++N+   D  E    VR +  + NN    +Q N
Sbjct:   21 AQVFPVQVSPQLIPPYSLNLSEYATSGSEKLILNLLFTDINESNVQVRIKFFLENNAGLSVQNN 84          
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0002884E5B (hypothetical protein n=1 Tax=Aquimarina agarilytica TaxID=1087449 RepID=UPI0002884E5B)

HSP 1 Score: 50.4 bits (119), Expect = 1.490e-5
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 0
Query:   20 WIVSF----GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNG 81
            WI++F     Q+FPV V   LIPP+SLNLSDY     + +++N+ L+D  E   +V  + +++N  
Sbjct:    9 WILAFQALQAQVFPVQVTPQLIPPYSLNLSDYQNAAREQVIVNLLLSDVTESNREVTLKFSMTNTA 74          
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0015869EF4 (fibronectin type III domain-containing protein n=2 Tax=Aquimarina TaxID=290174 RepID=UPI0015869EF4)

HSP 1 Score: 51.2 bits (121), Expect = 1.900e-5
Identity = 23/65 (35.38%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   25 GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNN-GVEILQTN 88
             Q+FPV++   +IPP+SL LS+Y    S+ L++N+ L D      ++R ++ + NN G+ I  T+
Sbjct:   22 AQVFPVNITPQVIPPYSLQLSEYTTSASEKLLVNLLLTDITRSNLEIRLKLYIENNAGISIQSTD 86          
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI0018C9ADB7 (hypothetical protein n=1 Tax=unclassified Aquimarina TaxID=2627091 RepID=UPI0018C9ADB7)

HSP 1 Score: 51.2 bits (121), Expect = 1.910e-5
Identity = 23/65 (35.38%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   25 GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNN-GVEILQTN 88
             Q+FPVD+   +IPP+SL LS+Y    S+ +++N+ L D      ++R ++ + NN G+ I  T+
Sbjct:   22 AQVFPVDITPQVIPPYSLQLSEYTTSASEKVLVNLLLTDITRSNLEIRLKLYIENNAGLSIQSTD 86          
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI000289DC88 (hypothetical protein n=1 Tax=Aquimarina agarilytica TaxID=1087449 RepID=UPI000289DC88)

HSP 1 Score: 50.8 bits (120), Expect = 2.410e-5
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0
Query:   20 WIVSF----GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNNG 81
            WI +F     Q+FPV V   LIPP+SLNLSDY     + +++N+ L+D  E   +V  + ++SN  
Sbjct:    9 WIFAFQALQAQVFPVQVTPQLIPPYSLNLSDYQNAAREQVIVNLLLSDVTESNREVTLKFSMSNTA 74          
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Match: UPI000554C0AC (fibronectin type III domain-containing protein n=1 Tax=Aquimarina megaterium TaxID=1443666 RepID=UPI000554C0AC)

HSP 1 Score: 50.8 bits (120), Expect = 2.600e-5
Identity = 24/65 (36.92%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   25 GQLFPVDVNAVLIPPHSLNLSDYGLEKSQDLMINMTLNDPIEPFWDVRFRVTVSNN-GVEILQTN 88
             Q+FPV+V   +IPP+SL LS+Y    S+ L++N+ L D      ++R ++ + NN G+ I  T+
Sbjct:   13 AQVFPVNVTPQVIPPYSLQLSEYTTSASEKLLVNLLLTDITRSNLEIRLKLYIENNAGLSIQSTD 77          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116444.3421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A364XU25_9BACT4.050e-638.10Uncharacterized protein n=1 Tax=Chryseolinea flava... [more]
A0A364XVU4_9BACT7.270e-638.75Fibronectin type-III domain-containing protein n=1... [more]
UPI0012F9764F1.390e-536.59fibronectin type III domain-containing protein n=1... [more]
UPI0018D019121.410e-536.59fibronectin type III domain-containing protein n=1... [more]
A0A1M6JNE0_9FLAO1.420e-540.63Fibronectin type III domain-containing protein n=1... [more]
UPI0002884E5B1.490e-537.88hypothetical protein n=1 Tax=Aquimarina agarilytic... [more]
UPI0015869EF41.900e-535.38fibronectin type III domain-containing protein n=2... [more]
UPI0018C9ADB71.910e-535.38hypothetical protein n=1 Tax=unclassified Aquimari... [more]
UPI000289DC882.410e-539.39hypothetical protein n=1 Tax=Aquimarina agarilytic... [more]
UPI000554C0AC2.600e-536.92fibronectin type III domain-containing protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availableTMHMMTMhelixcoord: 9..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116444contigM-pyrifera_M_contig116444:296..559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116444.3421.1mRNA_M-pyrifera_M_contig116444.3421.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116444 296..559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116444.3421.1 ID=prot_M-pyrifera_M_contig116444.3421.1|Name=mRNA_M-pyrifera_M_contig116444.3421.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp
MINFKLKSLIIVLFLSLNGWIVSFGQLFPVDVNAVLIPPHSLNLSDYGLE
KSQDLMINMTLNDPIEPFWDVRFRVTVSNNGVEILQTN
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