mRNA_M-pyrifera_M_contig116155.3349.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: D8LBZ8_ECTSI (Protochlorophyllide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ8_ECTSI) HSP 1 Score: 124 bits (311), Expect = 2.640e-32 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1
Query: 16 PLQAYKDSKVCNVLMMREMDKRFTPNGMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTEVREGGR 243
P +AYKDSKVCNVLMMREM+KR++ GM+VSALFPGCIAESPLFREKRGWFR FP+FQK+VT+Q VS E E GR
Sbjct: 262 PTKAYKDSKVCNVLMMREMNKRYSSGGMVVSALFPGCIAESPLFREKRGWFRAGFPVFQKFVTRQLVSVE--EAGR 335
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: A0A7S0M6J6_9CRYP (Protochlorophyllide reductase (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M6J6_9CRYP) HSP 1 Score: 113 bits (282), Expect = 2.060e-28 Identity = 51/77 (66.23%), Postives = 61/77 (79.22%), Query Frame = 1
Query: 13 NPLQAYKDSKVCNVLMMREMDKRFTPNGMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTEVREGGR 243
+P +AYKDSK CNVL M+EM +RF G+ SA+FPGC+AESPLFR+KR WFR +FPLFQKY+TKQFV V E GR
Sbjct: 253 DPTKAYKDSKACNVLTMKEMHRRFASKGVTFSAIFPGCVAESPLFRDKRDWFRFIFPLFQKYITKQFVP--VSEAGR 327
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: A0A6T8NUL2_HEMAN (Protochlorophyllide reductase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NUL2_HEMAN) HSP 1 Score: 114 bits (284), Expect = 1.050e-27 Identity = 53/77 (68.83%), Postives = 66/77 (85.71%), Query Frame = 1
Query: 16 PLQAYKDSKVCNVLMMREMDKRFTPN-GMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTEVREGGR 243
P ++YK+SKVCN ++MREM+KR+ + G+ V+A+FPGCIAESPLFR+KRGWFR LFPLFQKYVTKQFV E +E GR
Sbjct: 266 PTKSYKESKVCNAIVMREMNKRYAESRGITVNAMFPGCIAESPLFRQKRGWFRWLFPLFQKYVTKQFV--EEKEAGR 340
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: A0A7S0Z1U2_9CRYP (Protochlorophyllide reductase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z1U2_9CRYP) HSP 1 Score: 112 bits (280), Expect = 3.790e-27 Identity = 53/77 (68.83%), Postives = 65/77 (84.42%), Query Frame = 1
Query: 16 PLQAYKDSKVCNVLMMREMDKRFTPN-GMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTEVREGGR 243
P +AYK+SKVCN ++MREM+KR+ + G+ V+A+FPGCIAESPLFR+KR WFR LFPLFQKYVTKQFV E +E GR
Sbjct: 275 PTKAYKESKVCNAIVMREMNKRYAESRGITVNAMFPGCIAESPLFRQKRDWFRWLFPLFQKYVTKQFV--EEKEAGR 349
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: S0F3U3_CHOCR (Protochlorophyllide reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3U3_CHOCR) HSP 1 Score: 110 bits (275), Expect = 3.860e-27 Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 16 PLQAYKDSKVCNVLMMREMDKRFTPNGMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTEVREGGR 243
P +AYKDSKVCN+L M EM++R+ +G+ SA+FPGCIA+S LFREKRGWFR LFPLFQ+Y+TKQ V E E GR
Sbjct: 246 PTKAYKDSKVCNILTMTEMNRRYGTDGVTFSAVFPGCIAQSELFREKRGWFRALFPLFQRYITKQLVPVE--EAGR 319
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: A0A1X6NIP3_PORUM (Protochlorophyllide reductase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIP3_PORUM) HSP 1 Score: 108 bits (270), Expect = 8.230e-27 Identity = 51/76 (67.11%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 16 PLQAYKDSKVCNVLMMREMDKRFTPNGMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTEVREGGR 243
P +AYKDSKVCNVL M + +R +G+IVSA++PGCIA+S LFR+KRGWFR FPLFQKYVTKQ+VS E E GR
Sbjct: 187 PTKAYKDSKVCNVLTMTALHERAAKDGVIVSAVYPGCIADSELFRQKRGWFRWFFPLFQKYVTKQYVSEE--EAGR 260
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: A0A2V3J6B4_9FLOR (Protochlorophyllide reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6B4_9FLOR) HSP 1 Score: 107 bits (267), Expect = 5.140e-26 Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 16 PLQAYKDSKVCNVLMMREMDKRFTPNGMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTEVREGGR 243
P +AYKDSKVCN+L M+EM +R +G+ +A+FPGCIA+S LFREKRGWFR FPLFQKYVT+Q V E E GR
Sbjct: 240 PTKAYKDSKVCNILTMKEMHRRHASSGVAFTAIFPGCIAQSELFREKRGWFRWFFPLFQKYVTRQMVPVE--EAGR 313
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: L1JNU2_GUITC (Protochlorophyllide reductase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNU2_GUITC) HSP 1 Score: 108 bits (271), Expect = 6.760e-26 Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 16 PLQAYKDSKVCNVLMMREMDKRFTPN-GMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTEV 228
P +AYKDSKVCN ++MREM+KR+ + G+IV+A+FPGCIAESPLFR+KR WFR LFP FQK +TKQFV EV
Sbjct: 269 PTKAYKDSKVCNAIVMREMNKRYGKSRGLIVNAMFPGCIAESPLFRQKRAWFRWLFPKFQKAITKQFVPEEV 340
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: A0A7S1TKW4_9RHOD (Protochlorophyllide reductase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKW4_9RHOD) HSP 1 Score: 107 bits (267), Expect = 8.690e-26 Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 1
Query: 16 PLQAYKDSKVCNVLMMREMDKRFTPNGMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTE 225
P +AYKDSKVCN + M++M R++P G++VSALFPGC+A S LFREKRGWF + FP FQK +TKQ+V+T+
Sbjct: 258 PTKAYKDSKVCNAITMKQMSDRYSPRGVVVSALFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVTTQ 327
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Match: A0A5J4YUK9_PORPP (Protochlorophyllide reductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUK9_PORPP) HSP 1 Score: 105 bits (263), Expect = 3.150e-25 Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 16 PLQAYKDSKVCNVLMMREMDKRFTPNGMIVSALFPGCIAESPLFREKRGWFRTLFPLFQKYVTKQFVSTE 225
P +AYKDSKVCN + M++M R+ P G++VSA+FPGC+A S LFREKRGWF + FP FQK +TKQ+VS E
Sbjct: 255 PTKAYKDSKVCNAITMKQMSDRYGPRGVVVSAMFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVSVE 324 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116155.3349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116155.3349.1 >prot_M-pyrifera_M_contig116155.3349.1 ID=prot_M-pyrifera_M_contig116155.3349.1|Name=mRNA_M-pyrifera_M_contig116155.3349.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp MDDRNPLQAYKDSKVCNVLMMREMDKRFTPNGMIVSALFPGCIAESPLFRback to top mRNA from alignment at M-pyrifera_M_contig116155:225..467- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116155.3349.1 ID=mRNA_M-pyrifera_M_contig116155.3349.1|Name=mRNA_M-pyrifera_M_contig116155.3349.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=243bp|location=Sequence derived from alignment at M-pyrifera_M_contig116155:225..467- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116155:225..467- >mRNA_M-pyrifera_M_contig116155.3349.1 ID=mRNA_M-pyrifera_M_contig116155.3349.1|Name=mRNA_M-pyrifera_M_contig116155.3349.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig116155:225..467- (Macrocystis pyrifera P11B4 male)back to top |