mRNA_M-pyrifera_M_contig115837.3286.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: A0A7S4MML6_9EUKA (Glucan 1,4-alpha-glucosidase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MML6_9EUKA) HSP 1 Score: 157 bits (396), Expect = 1.180e-44 Identity = 73/126 (57.94%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVGRRQHTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPYGFHLSEQIDRNTGAEESATDLTWSYATILKAMWYRN 378
GDTYAGGNPW+LT+ SLAQLFYRGA + +P E++ HW+ IF +V H+ + +PL+FA V +AGDAV+ R+ YH + GFH EQ+D+NTGAE SATDLTWSYATILKAMW+RN
Sbjct: 185 GDTYAGGNPWVLTSASLAQLFYRGATGFVGQNEVPAEESLAHWQQIFLRVIHEHHSIRKMKKYTPLQFARLVTSAGDAVLDRIRYHTQSSGFHQPEQLDKNTGAEASATDLTWSYATILKAMWHRN 310
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: A0A0L0D8W1_THETB (Glucan 1,4-alpha-glucosidase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D8W1_THETB) HSP 1 Score: 129 bits (325), Expect = 8.490e-33 Identity = 69/131 (52.67%), Postives = 90/131 (68.70%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVGRRQHTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPYGFHLSEQIDRNTGAEESATDLTWSYATILKAMWYRNYFTTA 393
GDTYAGGNPWILTT +LAQL YR A+ + G+LP + + H+ +F + + ESL +S FA+ +A+AGD V+ R+ YHV GFHLSEQ+DR+TG E SATDLTWSYA +LKA+ R+ F A
Sbjct: 383 GDTYAGGNPWILTTAALAQLHYRAASEVVNVGKLPH-DALPHYAEMFGE------SAESLGKLSVANFALRLASAGDGVLERIRYHVAGAGFHLSEQLDRDTGFEMSATDLTWSYANVLKAVAARDAFVVA 506
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: A0A7S0LQZ5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQZ5_9EUKA) HSP 1 Score: 114 bits (284), Expect = 3.900e-29 Identity = 65/132 (49.24%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVGRRQHTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPYGFHLSEQIDRNTGAEESATDLTWSYATILKAMWYRNYFTTAA 396
GD YAGGNPWILTTN+LAQL+YRGA +L G P E WR R + + A S F+ +AT GD V+ RV YH+ +H+ EQ+D+NTG E SA+DLTWSYAT+LKAM R+ + A
Sbjct: 71 GDHYAGGNPWILTTNALAQLYYRGAKEALEVGP-PSVEDQAKWRTAM----RLEDDADLSTAES---FSAALATTGDGVLTRVRYHILGLDYHMYEQLDKNTGFEISASDLTWSYATLLKAMHARDAYVATA 194
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: F2U8G2_SALR5 (Glucan 1,4-alpha-glucosidase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8G2_SALR5) HSP 1 Score: 114 bits (285), Expect = 5.490e-27 Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVGRRQHTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPYGFHLSEQIDRNTGAEESATDLTWSYATILKAMWYRNYFTTAA 396
GD YAGGNPW+LT+ LA++ YR A ++ + R+P E H++ I Q+ E+L +P A + +GD V+ R+ H H EQ+D+NTGAE SATDLTWSYATILKAM R+ T+AA
Sbjct: 392 GDQYAGGNPWVLTSGCLAEVLYRAANSTAATRRMPTAEATEHFKAIAAQLNPAAVAAENLDMDTPAGLARALVLSGDGVLNRIRAHTINNDLHQPEQLDKNTGAEASATDLTWSYATILKAMAVRDTITSAA 523
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: A0A7S3LYN3_9STRA (Glucan 1,4-alpha-glucosidase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYN3_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.680e-26 Identity = 61/132 (46.21%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVGRRQHTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPYGFHLSEQIDRNTGAEESATDLTWSYATILKAMWYRNYFTTAA 396
GDTYAGGNPW+L+T++LA LFYR AA L +G +P M W++ + S L + A A GD V+ R+ HV+ FHL EQIDRNTG + SA+DLTWSYA L AM+YR + A
Sbjct: 391 GDTYAGGNPWVLSTSALASLFYRAAAHVLQNG-VPSSAAMSVWKSAI--------NSPSALPTNAAALAQVFAAQGDGVLLRLRRHVQGNDFHLDEQIDRNTGYQISASDLTWSYAETLNAMYYRGLYLNVA 513
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: A9UPK3_MONBE (Glucan 1,4-alpha-glucosidase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UPK3_MONBE) HSP 1 Score: 106 bits (265), Expect = 2.550e-24 Identity = 58/125 (46.40%), Postives = 73/125 (58.40%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVGRRQ---HTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPYGFHLSEQIDRNTGAEESATDLTWSYATILKAM 366
GD+Y GNPW+LTT LA+L YR +A LT G + E + W R Q T E L P +A +GD V+ R+ YH + GFH+ EQ+D+NTGA SA DLTWSYAT+LKAM
Sbjct: 399 GDSYDNGNPWVLTTGCLAELLYRASAQVLTRGAVLAEEAVA-WLGALQSTNRVQLEAQTAEEL--QDPRVLGRALAQSGDGVLLRIRYHTQSIGFHMPEQLDKNTGANLSAYDLTWSYATVLKAM 520
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: A0A7S2F838_9STRA (Glucan 1,4-alpha-glucosidase n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F838_9STRA) HSP 1 Score: 102 bits (254), Expect = 7.770e-23 Identity = 62/132 (46.97%), Postives = 75/132 (56.82%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVGRRQHTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPYGFHLSEQIDRNTGAEESATDLTWSYATILKAMWYRNYFTTAA 396
GD+YAGGNPW+LTT +LA LFYRG+ L +G LPD + W + + S A S L AGD+VM R+ HV FHL EQIDRNTG + SA DLTWSYA +L A+ R AA
Sbjct: 394 GDSYAGGNPWVLTTAALATLFYRGSL-DLAAGNLPDADAQAVWADALGE-----EFPASASAASDL-----FLRAGDSVMIRLRSHVVADDFHLDEQIDRNTGVQMSAKDLTWSYAEVLNAVTARKAVIDAA 514
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: A0A7S2H1A1_9STRA (Glucan 1,4-alpha-glucosidase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H1A1_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 9.720e-22 Identity = 54/122 (44.26%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVGRRQHTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPYGFHLSEQIDRNTGAEESATDLTWSYATILKAM 366
GDTYAGGNPW+LTT +LAQ+FYR A + T G LP W + + + E A +AT+GD+V+ R+ HV G L EQIDR++G + SA LTWSYA +L AM
Sbjct: 400 GDTYAGGNPWVLTTAALAQVFYRAAFQTKTFG-LPSEAAQEQWSKL------------GITTSTSSEMAQALATSGDSVLLRLAKHVNGDGGRLDEQIDRDSGEQASAQSLTWSYAEVLNAM 508
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: A0A0V0QB16_PSEPJ (Glucan 1,4-alpha-glucosidase n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QB16_PSEPJ) HSP 1 Score: 92.8 bits (229), Expect = 2.100e-19 Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGR--LPDRETMRHWRNIFWQVGRRQHTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPY-GFHLSEQIDRNTGAEESATDLTWSYATILK 360
GD YAGGNPW L + SLA++FY+GA SL +P+ E + HWRN+ + + P A AG+AVMYR++ HV+ F L EQID+N G + SA DLTWS+A +L+
Sbjct: 390 GDVYAGGNPWQLLSASLAEVFYKGAEASLAMEHEYVPE-EHLVHWRNLMKLPAK----------VKPTHLAAAQKKAGNAVMYRIWVHVQDTDSFSLYEQIDKNNGQQMSAKDLTWSFANVLR 501
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Match: A0A7S4LNP1_OXYMA (Glucan 1,4-alpha-glucosidase n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S4LNP1_OXYMA) HSP 1 Score: 87.0 bits (214), Expect = 2.220e-17 Identity = 51/122 (41.80%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 1 GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVGRRQHTTESLLAMSPLEFAMEVATAGDAVMYRVYYHVEPYGFHLSEQIDRNTGAEESATDLTWSYATILKAM 366
GD+Y GGNPW+L T +LAQL YR AA + T D++T + + ++ ++ ++ L + L A+ AGD V+ R+ HVE FH+ EQ+ R G++ SA DLTW YA ILKAM
Sbjct: 377 GDSYDGGNPWVLLTATLAQLIYRQAAAATTG--TVDKDT--------YALLQQAYSIDAGLTGAALGKAL--MGAGDGVLMRIRKHVEADDFHMKEQLSRTDGSQTSAKDLTWGYANILKAM 486 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115837.3286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115837.3286.1 >prot_M-pyrifera_M_contig115837.3286.1 ID=prot_M-pyrifera_M_contig115837.3286.1|Name=mRNA_M-pyrifera_M_contig115837.3286.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp GDTYAGGNPWILTTNSLAQLFYRGAATSLTSGRLPDRETMRHWRNIFWQVback to top mRNA from alignment at M-pyrifera_M_contig115837:57..452+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115837.3286.1 ID=mRNA_M-pyrifera_M_contig115837.3286.1|Name=mRNA_M-pyrifera_M_contig115837.3286.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig115837:57..452+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115837:57..452+ >mRNA_M-pyrifera_M_contig115837.3286.1 ID=mRNA_M-pyrifera_M_contig115837.3286.1|Name=mRNA_M-pyrifera_M_contig115837.3286.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig115837:57..452+ (Macrocystis pyrifera P11B4 male)back to top |