mRNA_M-pyrifera_M_contig11558.3227.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: A0A6H5L6B2_9PHAE (DHQ_synthase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6B2_9PHAE) HSP 1 Score: 203 bits (517), Expect = 1.120e-58 Identity = 97/113 (85.84%), Postives = 106/113 (93.81%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDFCDRQ 351
+TGLGYG+LLHGEAVAIGMHMAADMSCR+GWV++ELVDR+V LM KAGLPVELP GGGMDMDKFL AMAVDKKV+DGELRLILLKG LGGC+MTG +DE AMRATIQDFCDRQ
Sbjct: 332 ETGLGYGKLLHGEAVAIGMHMAADMSCRMGWVDQELVDRSVALMEKAGLPVELPKGGGMDMDKFLTAMAVDKKVADGELRLILLKGDLGGCVMTGEFDEAAMRATIQDFCDRQ 444
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: A0A835Z318_9STRA (3-Dehydroquinate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z318_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.230e-40 Identity = 76/113 (67.26%), Postives = 87/113 (76.99%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDFCDRQ 351
+TGLGYG LLHGEAVAIG HMAA MS +LGW++ L R V L+ A LPVELP GGGM KF AMA+DKKVS+GELRL+LL+GPLGGC+ TG YD AMR TI +FC RQ
Sbjct: 264 ETGLGYGALLHGEAVAIGTHMAAVMSAKLGWIDAALAARAVALLRAAALPVELPRGGGMTPAKFEAAMALDKKVSEGELRLVLLRGPLGGCVFTGEYDAAAMRETIAEFCARQ 376
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: A0A446TAZ8_TRITD (DHQ_synthase domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446TAZ8_TRITD) HSP 1 Score: 132 bits (332), Expect = 6.230e-35 Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDFCD 345
+TGLGYG LHGEAVA G MAADMS RLGW++ + RT ++ +A LPV P G M ++KF N MAVDKKV+DG LRLILLKGPLGGC+ TG YD A+ T++ FCD
Sbjct: 16 ETGLGYGEWLHGEAVAAGTVMAADMSYRLGWIDESIKKRTFDILDQAKLPVTPPKG--MTVEKFRNIMAVDKKVADGLLRLILLKGPLGGCVFTGEYDRKALDETLRAFCD 124
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: W7TCV4_9STRA (3-dehydroquinate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCV4_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.920e-34 Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDFC 342
+TGLGYG+ LHGEAV++GM MA DMS RLGWV+RE+ RTV L+ +AGLPV LP GMD++KF M++DKKVSDG LRLILLKG LG C+ T YD +R TI+ +C
Sbjct: 314 ETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: UPI001F5CC96F (3-dehydroquinate synthase, chloroplastic n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CC96F) HSP 1 Score: 135 bits (341), Expect = 2.440e-34 Identity = 69/111 (62.16%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDFCD 345
+TGLGYG LHGEAVA G MAADMS RLGW++ + RT ++ KA LPV P G M M+KF N MAVDKKV+DG LRLILLKGPLGGC+ TG YD A+ T++ FCD
Sbjct: 177 ETGLGYGEWLHGEAVAAGTVMAADMSYRLGWIDESIQKRTFDILEKAKLPVAPPKG--MTMEKFRNIMAVDKKVADGLLRLILLKGPLGGCVFTGEYDRKALDETLRAFCD 285
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: A0A7S4J2A1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J2A1_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.550e-33 Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDF 339
+ G GYG LHGEAVAIG MAA MS R+GW++ ELV RT +M A LP ELP+ MD + FL+AM+VDKKV+DG+LRLILLKG LG C+ TG +D+ AM ATI++F
Sbjct: 224 ENGSGYGVWLHGEAVAIGTAMAATMSARMGWIDEELVKRTYTIMHAANLPTELPVDSPMDTETFLDAMSVDKKVADGQLRLILLKGDLGNCVFTGDFDKDAMTATIEEF 332
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: A0A4D9CYT3_9STRA (DHQ_synthase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYT3_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.140e-33 Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDFC 342
+TGLGYG+ LHGEAV++GM MA DMS RLGWV+RE+ RTV L+ +AGLPV LP GMD++KF M++DKKVSDG LRLILLKG LG C+ T YD +R TI+ +C
Sbjct: 636 ETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGQCVFTSAYDVEVLRETIRAYC 745
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: A0A7S1E6B7_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E6B7_9STRA) HSP 1 Score: 129 bits (324), Expect = 5.000e-33 Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDF 339
+ G GYG LHGEAVAIG MAA MS +GW++ LV R ++++A LPVELP+ MD KFL M+VDKKV+DG+LRLILLKG LG C+ TG +D+ AM T+ +F
Sbjct: 64 ENGSGYGTWLHGEAVAIGTAMAATMSAEIGWIDEALVKRIYDILLRAKLPVELPLDSPMDKSKFLKLMSVDKKVADGQLRLILLKGSLGNCVFTGDFDQNAMEKTVDEF 172
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: A0A7S4J271_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J271_9STRA) HSP 1 Score: 135 bits (339), Expect = 7.450e-33 Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDF 339
+ G GYG LHGEAVAIG MAA MS R+GW++ ELV RT +M A LP ELP+ MD + FL+AM+VDKKV+DG+LRLILLKG LG C+ TG +D+ AM ATI++F
Sbjct: 310 ENGSGYGVWLHGEAVAIGTAMAATMSARMGWIDEELVKRTYTIMHAANLPTELPVDSPMDTETFLDAMSVDKKVADGQLRLILLKGDLGNCVFTGDFDKDAMTATIEEF 418
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Match: A0A7S2GX65_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GX65_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.230e-32 Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 1
Query: 13 QTGLGYGRLLHGEAVAIGMHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMAVDKKVSDGELRLILLKGPLGGCLMTGHYDEGAMRATIQDF 339
+ G GYG LHGEAVAIG MAA MS R+GW++ L+ RT +++KA LPVELP M+ + FL M+VDKKV+DG+LRLILLKG LG C+ TG +DE AM+ATI DF
Sbjct: 317 ENGSGYGTWLHGEAVAIGTAMAATMSARMGWIDEPLLKRTYDILMKANLPVELPPDSPMNKETFLKLMSVDKKVADGQLRLILLKGDLGNCVFTGEFDEEAMKATIDDF 425 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11558.3227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11558.3227.1 >prot_M-pyrifera_M_contig11558.3227.1 ID=prot_M-pyrifera_M_contig11558.3227.1|Name=mRNA_M-pyrifera_M_contig11558.3227.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=96bp MHMAADMSCRLGWVERELVDRTVKLMVKAGLPVELPMGGGMDMDKFLNAMback to top mRNA from alignment at M-pyrifera_M_contig11558:6841..9411- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11558.3227.1 ID=mRNA_M-pyrifera_M_contig11558.3227.1|Name=mRNA_M-pyrifera_M_contig11558.3227.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2571bp|location=Sequence derived from alignment at M-pyrifera_M_contig11558:6841..9411- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11558:6841..9411- >mRNA_M-pyrifera_M_contig11558.3227.1 ID=mRNA_M-pyrifera_M_contig11558.3227.1|Name=mRNA_M-pyrifera_M_contig11558.3227.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=576bp|location=Sequence derived from alignment at M-pyrifera_M_contig11558:6841..9411- (Macrocystis pyrifera P11B4 male)back to top |