mRNA_M-pyrifera_M_contig115019.3123.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115019.3123.1 vs. uniprot
Match: A0A517W7P8_9PLAN (Cyclic di-GMP phosphodiesterase response regulator RpfG n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517W7P8_9PLAN) HSP 1 Score: 329 bits (844), Expect = 1.250e-109 Identity = 184/189 (97.35%), Postives = 187/189 (98.94%), Query Frame = 1
Query: 1 KNILLLARGKKITQAYIESLKKRGIRSVRVHERDLSNLMLPEGESQQSEPGSARRLKRRRTQLRTSVSSRKRQAPETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL 567
KNILLLARGKKITQAYI+SLKKRGIRSVRVHERDLSNLMLP+GESQQSEPG+ARRLKRRRTQLRTS SSRKRQ PETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL
Sbjct: 38 KNILLLARGKKITQAYIDSLKKRGIRSVRVHERDLSNLMLPDGESQQSEPGAARRLKRRRTQLRTSASSRKRQVPETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL 226
BLAST of mRNA_M-pyrifera_M_contig115019.3123.1 vs. uniprot
Match: A0A518A1W5_9PLAN (Cyclic di-GMP phosphodiesterase response regulator RpfG n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A1W5_9PLAN) HSP 1 Score: 283 bits (724), Expect = 1.510e-91 Identity = 150/189 (79.37%), Postives = 164/189 (86.77%), Query Frame = 1
Query: 1 KNILLLARGKKITQAYIESLKKRGIRSVRVHERDLSNLMLPEGESQQSEPGSARRLKRRRTQLRTSVSSRKRQAPETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL 567
KNILLLARGKKIT+AYIESLKKRGI SVRVHERDLSNLML GESQQSEPGSAR+L RR QLR + S RK+ PETR +GSPWQIQTSSFLHQVSPVQT+DY PALQSKYH+QF V+TKAT EIY+QLLITT++SMSQ++NM SDDLDLFVLEGTAPVE GNLCRH LQMSSLA+AMGTQL
Sbjct: 38 KNILLLARGKKITKAYIESLKKRGIHSVRVHERDLSNLMLAPGESQQSEPGSARKLNRRLNQLRATTSRRKQSEPETRSSGSPWQIQTSSFLHQVSPVQTSDYSPALQSKYHKQFEVMTKATSEIYRQLLITTTISMSQIDNMTSVSLAQLSDDLDLFVLEGTAPVEQGNLCRHSLQMSSLAMAMGTQL 226
BLAST of mRNA_M-pyrifera_M_contig115019.3123.1 vs. uniprot
Match: A0A517RB01_9PLAN (Cyclic di-GMP phosphodiesterase response regulator RpfG n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RB01_9PLAN) HSP 1 Score: 206 bits (523), Expect = 2.080e-61 Identity = 111/190 (58.42%), Postives = 144/190 (75.79%), Query Frame = 1
Query: 1 KNILLLARGKKITQAYIESLKKRGIRSVRVHERDLSNLMLPEGESQQSEPGSARRLKRRRTQLRTSVSSRKRQAP-ETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL 567
KN+LLLA GK IT+ IE+LKKRGIRSVRVHERDL NLML GESQ S+ S + ++R+R QL +++S+ ++QA ET++ SPWQIQTSSFLH++ PV Y L++KY EQF VLTK T +IYKQLL+T +SM Q+ ++ + D+DLFVLEG AP+++GN CRHGLQMSSLA+A+GTQL
Sbjct: 38 KNLLLLASGKTITKGTIENLKKRGIRSVRVHERDLHNLMLAPGESQDSQSDSPQDIRRKRLQLASAISAAQKQAALETQRTHSPWQIQTSSFLHEIRPVPVAGYSNRLKTKYREQFTVLTKITDDIYKQLLLTKRISMPQIYDITSMSFSQMAQDMDLFVLEGIAPIDNGNFCRHGLQMSSLAMAIGTQL 227
BLAST of mRNA_M-pyrifera_M_contig115019.3123.1 vs. uniprot
Match: A0A517W268_9PLAN (Cyclic di-GMP phosphodiesterase response regulator RpfG n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W268_9PLAN) HSP 1 Score: 202 bits (514), Expect = 4.060e-60 Identity = 105/188 (55.85%), Postives = 140/188 (74.47%), Query Frame = 1
Query: 4 NILLLARGKKITQAYIESLKKRGIRSVRVHERDLSNLMLPEGESQQSEPGSARRLKRRRTQLRTSVSSRKRQAPETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL 567
NILLLA GK IT+ IE+LKKRGIRSVRVHERDL NLMLP GESQ SEP S + +R++ +L++ ++ ++Q +T++ SPW IQTSSFLH++ PVQ + Y ++++Y EQF LTK TG +YKQLL T +SM Q+ ++ ++D+DLFVLEG P++ GN CRHGLQMSSLA+A+GTQL
Sbjct: 39 NILLLASGKTITKGTIENLKKRGIRSVRVHERDLQNLMLPPGESQNSEPKSNQNKRRQKIRLQSVQAASQKQEMDTQRTDSPWHIQTSSFLHEIKPVQNSSYSTEMKNQYREQFTALTKITGSVYKQLLSTKQISMRQIYDITNISFVQMAEDMDLFVLEGMTPIDVGNFCRHGLQMSSLAMAIGTQL 226
BLAST of mRNA_M-pyrifera_M_contig115019.3123.1 vs. uniprot
Match: A6C6Z3_9PLAN (HD-GYP domain-containing protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A6C6Z3_9PLAN) HSP 1 Score: 190 bits (482), Expect = 2.060e-55 Identity = 106/189 (56.08%), Postives = 133/189 (70.37%), Query Frame = 1
Query: 1 KNILLLARGKKITQAYIESLKKRGIRSVRVHERDLSNLMLPEGESQQSEPGSARRLKRRRTQLRTSVSSRKRQAPETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL 567
KNILLLA GK IT+ I++LKKRGIRSVRVHERDLSNL L GE+Q S ++ RL+ S + RQA ET++ SPWQIQ+ SFLH+V+P TT Y P LQ++Y ++F VLTK T +IYKQ+L + +S+SQ+ ++ D+DLFVLEG PV GN CRHGLQMSSLA+AMGTQL
Sbjct: 38 KNILLLASGKSITKTTIQNLKKRGIRSVRVHERDLSNLTLAPGENQSSGSTASLRLQ--------SQKLKNRQADETKRTNSPWQIQSQSFLHEVTPPATTAYSPTLQTEYRKEFAVLTKVTDDIYKQILGASRISLSQIQSVTNSSFSQMMQDMDLFVLEGITPVALGNFCRHGLQMSSLAMAMGTQL 218
BLAST of mRNA_M-pyrifera_M_contig115019.3123.1 vs. uniprot
Match: A0A2E2BVW9_9PLAN (HD-GYP domain-containing protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BVW9_9PLAN) HSP 1 Score: 190 bits (483), Expect = 6.490e-55 Identity = 106/189 (56.08%), Postives = 134/189 (70.90%), Query Frame = 1
Query: 1 KNILLLARGKKITQAYIESLKKRGIRSVRVHERDLSNLMLPEGESQQSEPGSARRLKRRRTQLRTSVSSRKRQAPETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL 567
KNILLLA GKKITQA I++LK RGIR+VRVHERDLSNL L GESQ S S+ RL+ ++ + R+ +S QA +T + SPWQIQ SFLH+V+P T Y P LQ +Y ++F VLTK T +IY+Q+L + +S+SQ+ N+ D+DLFVLEG PV GN CRHGLQMSSLA+A+GTQL
Sbjct: 99 KNILLLASGKKITQATIQNLKNRGIRNVRVHERDLSNLTLSPGESQSSGFTSSLRLRSQKLRKRSGGTSAPGQAADTERTNSPWQIQPQSFLHEVTPPAATAYSPELQQEYRKEFAVLTKVTDDIYRQVLGASRISLSQIRNVTDCSFSKMIQDMDLFVLEGITPVALGNFCRHGLQMSSLAMAIGTQL 287
BLAST of mRNA_M-pyrifera_M_contig115019.3123.1 vs. uniprot
Match: A0A518I7M4_9PLAN (Cyclic di-GMP phosphodiesterase response regulator RpfG n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I7M4_9PLAN) HSP 1 Score: 188 bits (478), Expect = 1.040e-54 Identity = 105/190 (55.26%), Postives = 137/190 (72.11%), Query Frame = 1
Query: 1 KNILLLARGKKITQAYIESLKKRGIRSVRVHERDLSNLMLPEGESQQSEPGSARRLKRRRTQLRTSVSSRKRQAP-ETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL 567
KN+LLLA GK IT+ IE+LKKRGIRSVRVHERDL NLML GESQ ++ S + + +R QL ++ ++ ++QA ET++ SPWQIQTSSFL+++ PV + Y L++KY EQF V TK T +IY QLLIT +SM Q+ ++ D+DLFVLEG P+E+GN CRH LQMSSLA+A+GTQL
Sbjct: 38 KNLLLLASGKTITKGTIENLKKRGIRSVRVHERDLHNLMLGPGESQNTQSDSLQENRLKRLQLASAYTAAQKQAALETQRTDSPWQIQTSSFLNELKPVPVSRYSTGLKNKYQEQFTVQTKITNDIYTQLLITKRISMPQIYDITNISFSQMRQDMDLFVLEGITPIENGNFCRHDLQMSSLAMAIGTQL 227
BLAST of mRNA_M-pyrifera_M_contig115019.3123.1 vs. uniprot
Match: A0A517VCX0_9PLAN (Cyclic di-GMP phosphodiesterase response regulator RpfG n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VCX0_9PLAN) HSP 1 Score: 188 bits (477), Expect = 1.370e-54 Identity = 103/189 (54.50%), Postives = 133/189 (70.37%), Query Frame = 1
Query: 1 KNILLLARGKKITQAYIESLKKRGIRSVRVHERDLSNLMLPEGESQQSEPGSARRLKRRRTQLRTSVSSRKRQAPETRQAGSPWQIQTSSFLHQVSPVQTTDYVPALQSKYHEQFRVLTKATGEIYKQLLITTSVSMSQLNNMXXXXXXXXSDDLDLFVLEGTAPVEDGNLCRHGLQMSSLALAMGTQL 567
KNILLLA GK IT+ I+SLKKRGIR+VRVH+RDLSNL L GESQ S S+ +L+ ++ + R S RQ +T + SPWQIQ+ SFLH+V+P T Y P LQ +Y ++F VLTK T +IY+Q+L ++ +S SQ+ ++ D+DLFVLEG PV GN+CRHGLQMSSLA+AMGTQL
Sbjct: 38 KNILLLASGKSITKTTIQSLKKRGIRNVRVHDRDLSNLTLAPGESQSSGFTSSLQLRSQKLKNRAGDPSSNRQVADTERTNSPWQIQSQSFLHEVTPPTATAYSPTLQKEYRKEFAVLTKLTDDIYRQILASSRISTSQIQSVTNSSFSQMRQDMDLFVLEGITPVALGNICRHGLQMSSLAMAMGTQL 226 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115019.3123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115019.3123.1 >prot_M-pyrifera_M_contig115019.3123.1 ID=prot_M-pyrifera_M_contig115019.3123.1|Name=mRNA_M-pyrifera_M_contig115019.3123.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp KNILLLARGKKITQAYIESLKKRGIRSVRVHERDLSNLMLPEGESQQSEPback to top mRNA from alignment at M-pyrifera_M_contig115019:2..568- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115019.3123.1 ID=mRNA_M-pyrifera_M_contig115019.3123.1|Name=mRNA_M-pyrifera_M_contig115019.3123.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig115019:2..568- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115019:2..568- >mRNA_M-pyrifera_M_contig115019.3123.1 ID=mRNA_M-pyrifera_M_contig115019.3123.1|Name=mRNA_M-pyrifera_M_contig115019.3123.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig115019:2..568- (Macrocystis pyrifera P11B4 male)back to top |