mRNA_M-pyrifera_M_contig114786.3070.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: F4QA28_CAVFA (Autophagy protein 16 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QA28_CAVFA) HSP 1 Score: 57.4 bits (137), Expect = 1.930e-7 Identity = 29/84 (34.52%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 22 LDRSQDHCTKYKNALKDLQVTKRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEFYNNMLKMQRN 273
L+ S+D+ K + +++ ++L++EL LQ E++ E + KL + ELL+RW++K N +A K+N AN+FY+ M++ + N
Sbjct: 158 LNGSEDNYKKLEYVIEEKTTVTQILKDELSALQAEFLHNESKVIKLEQENGELLERWIRKKNEEASKMNEANDFYHRMVEQREN 241
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: A0A0D2X1H2_CAPO3 (TipD n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X1H2_CAPO3) HSP 1 Score: 56.2 bits (134), Expect = 4.500e-7 Identity = 31/88 (35.23%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 31 SQDHCTKYKNALKDLQVTKRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEFYNNMLKMQRNTELLQQA 294
S+ C + V ++LQ+ELQ LQ+E +K+EE++ L V+ + L++RW++K N +A K+N AN FY +++ M++ L+ A
Sbjct: 242 SEKACEDVTARFNESMVAIQILQDELQALQLELLKVEERNKILEVENTSLVERWLRKMNEEALKMNEANMFYESVVDMKKREALMDAA 329
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: F1A5I5_DICPU (ATG16 domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A5I5_DICPU) HSP 1 Score: 55.5 bits (132), Expect = 9.210e-7 Identity = 31/94 (32.98%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 1 IVQLKLDLDRSQDHCTKYKNALKDLQVT-------KRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEFYNNMLK 261
I+ ++++DR++ + +A+K L++T ++L++EL LQ EY+ E + KL + S L++RW++K N +A K+N AN+FY M++
Sbjct: 153 IMSKEIEVDRAKQVLQQNDDAIKRLEMTIIEKENVSQILRDELTSLQTEYLHNESKVVKLEQENSSLVERWLRKKNEEASKMNEANDFYQKMVE 246
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: A0A8H7PU92_MORIS (ATG16 domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PU92_MORIS) HSP 1 Score: 55.1 bits (131), Expect = 1.230e-6 Identity = 29/72 (40.28%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 64 LKDLQVTKRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEFYNNMLKMQRNTE 279
LK V +VLQ+EL LQ+E+ EE++ +L + SEL+ RW+KK N +A+K+N A FY ++ + +N++
Sbjct: 75 LKQKDVAIQVLQDELSTLQLEFSTTEEKNKQLFKENSELVQRWLKKMNEEAEKMNEATMFYESLAEQAKNSD 146
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: D3B8K2_POLPP (Autophagy protein 16 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B8K2_POLPP) HSP 1 Score: 53.5 bits (127), Expect = 4.370e-6 Identity = 31/94 (32.98%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 1 IVQLKLDLDRSQDHCTKYKNALKDLQV-------TKRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEFYNNMLK 261
+V +++L+R + T +++ K L+ ++L++EL LQ E++ E + KL + SELL+RW++K N +A K+N AN+FY+ M++
Sbjct: 145 MVSKEIELERVRSMLTSSEDSYKRLEAIIEEKTTVTQILKDELSALQSEFLHNESKVIKLEQENSELLERWIRKKNEEASKMNEANDFYHKMVE 238
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: A0A1X2I5F6_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2I5F6_9FUNG) HSP 1 Score: 52.8 bits (125), Expect = 8.120e-6 Identity = 29/86 (33.72%), Postives = 49/86 (56.98%), Query Frame = 1
Query: 1 IVQLKLDLDRSQDHCTKYKNALKDLQVTKRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEFYNNML 258
+ QL + C L++ +T ++LQ+EL LQ+E EE++ +L + +L+ RWM+K NS+A+K+N A +FY L
Sbjct: 114 LTQLTEKASKLSSKCELQIEQLREKDITIQILQDELSALQLEITTTEERNQQLTKENLQLVQRWMEKMNSEAEKMNEATQFYETAL 199
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: A0A015IA79_RHIIW (ATG16 domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015IA79_RHIIW) HSP 1 Score: 52.4 bits (124), Expect = 9.120e-6 Identity = 27/68 (39.71%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 61 ALKDLQVTKRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEFYNNMLKM 264
A+++ +VT ++LQ+E LQ+E K++E+ L + +LL RW+KK N +A+K+N AN+FY + L++
Sbjct: 163 AIREKEVTIQLLQDENATLQLEIGKIDERMKDLERENGQLLQRWLKKMNEEAEKMNEANQFYESALEV 230
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: U9SGU9_RHIID (ATG16 domain-containing protein n=11 Tax=Glomeraceae TaxID=36751 RepID=U9SGU9_RHIID) HSP 1 Score: 52.4 bits (124), Expect = 1.110e-5 Identity = 27/68 (39.71%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 61 ALKDLQVTKRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEFYNNMLKM 264
A+++ +VT ++LQ+E LQ+E K++E+ L + +LL RW+KK N +A+K+N AN+FY + L++
Sbjct: 163 AIREKEVTIQLLQDENATLQLEIGKIDERMKDLERENGQLLQRWLKKMNEEAEKMNEANQFYESALEV 230
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: A0A642V8M3_9ASCO (ATG16 domain-containing protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642V8M3_9ASCO) HSP 1 Score: 51.2 bits (121), Expect = 1.310e-5 Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 1
Query: 7 QLKLDLDRSQDHCTKYKNALKDLQVTKRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEF 243
+LK D + +++ KY+ L + ++EL LQ++ EE + KL D S L+DRWMKK +A K+N ANEF
Sbjct: 88 ELKKDAETNKETLRKYEKQCNSLXXXAQNAKDELLALQIQLNISEENNRKLKEDNSALVDRWMKKVEGEASKMNEANEF 166
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Match: A0A397GKH4_9GLOM (ATG16 domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GKH4_9GLOM) HSP 1 Score: 52.0 bits (123), Expect = 1.530e-5 Identity = 27/67 (40.30%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 64 LKDLQVTKRVLQEELQVLQVEYVKMEEQHTKLGVDYSELLDRWMKKANSDADKVNVANEFYNNMLKM 264
L++ +T ++LQ+EL LQ+E K++E+ L + +LL RW+KK N +A+K+N AN FY + L++
Sbjct: 179 LREKDITIQLLQDELSTLQLELGKIDERMKDLEKENGQLLQRWLKKMNEEAEKMNEANLFYESALEV 245 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114786.3070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114786.3070.1 >prot_M-pyrifera_M_contig114786.3070.1 ID=prot_M-pyrifera_M_contig114786.3070.1|Name=mRNA_M-pyrifera_M_contig114786.3070.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp IVQLKLDLDRSQDHCTKYKNALKDLQVTKRVLQEELQVLQVEYVKMEEQHback to top mRNA from alignment at M-pyrifera_M_contig114786:72..371+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114786.3070.1 ID=mRNA_M-pyrifera_M_contig114786.3070.1|Name=mRNA_M-pyrifera_M_contig114786.3070.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig114786:72..371+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114786:72..371+ >mRNA_M-pyrifera_M_contig114786.3070.1 ID=mRNA_M-pyrifera_M_contig114786.3070.1|Name=mRNA_M-pyrifera_M_contig114786.3070.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig114786:72..371+ (Macrocystis pyrifera P11B4 male)back to top |