mRNA_M-pyrifera_M_contig113873.2878.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A0A2E7KHS4_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KHS4_9PLAN) HSP 1 Score: 303 bits (775), Expect = 3.130e-93 Identity = 157/159 (98.74%), Postives = 157/159 (98.74%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQL APASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSE TAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ
Sbjct: 1062 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLPAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSEATAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 1220
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A0A518A842_9PLAN (Outer membrane biogenesis protein BamB n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A842_9PLAN) HSP 1 Score: 259 bits (661), Expect = 2.710e-77 Identity = 131/159 (82.39%), Postives = 146/159 (91.82%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
LSTIDLKQPVD DAG+SQTDIAVTDASGQLQVLDA+T QLKTKL L PASNDLWIT NLLFVESRQ LTCYE+KDSL+QLWQLKLP SL+G+PS +G+RL L+LQ+GSVLAVDP+TGQVQSET APLPSSGS+VTL+K+LLVP+VDGSLYRIDQ LQ
Sbjct: 1065 LSTIDLKQPVDFDAGVSQTDIAVTDASGQLQVLDARTSQLKTKLTLPTPASNDLWITGNLLFVESRQMLTCYEIKDSLKQLWQLKLPDSSLSGAPSSEGNRLLLALQSGSVLAVDPKTGQVQSETKAPLPSSGSIVTLDKILLVPTVDGSLYRIDQTLQ 1223
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A0A517RH37_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RH37_9PLAN) HSP 1 Score: 213 bits (541), Expect = 6.400e-61 Identity = 104/159 (65.41%), Postives = 131/159 (82.39%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
LS D KQP+D A +A+ DASGQLQ+LDAKT Q+K KLQL PA+NDLWITD LLFVES+QTL+C++LK+ LQ++W+LKLPG SLAG+P+ RL LSLQNG++L+VDPQ+GQ+QS+ APLP+SGS+V LEKL++VP+VDGSLYRIDQ LQ
Sbjct: 1050 LSIADSKQPIDFKAAKGNNMLAIADASGQLQLLDAKTAQVKAKLQLPVPATNDLWITDELLFVESKQTLSCFDLKNELQKVWELKLPGASLAGAPTVIDKRLLLSLQNGALLSVDPQSGQIQSKANAPLPASGSIVNLEKLIIVPTVDGSLYRIDQVLQ 1208
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A0A518IE03_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IE03_9PLAN) HSP 1 Score: 196 bits (499), Expect = 3.010e-55 Identity = 98/159 (61.64%), Postives = 124/159 (77.99%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
LS DLKQP+D A +A+TDASGQLQ+LDAKT Q+K K QL PA+NDLWI ++LLFVES+Q L+C+ +K+ LQ+ W LKLP SLAG+PS +L LSLQNG++L+VDPQ+GQ+ S+ PLP+SGS+V LEKL +VP+VDGSLYRIDQ LQ
Sbjct: 1064 LSIADLKQPIDFKAAKGTNLLAITDASGQLQLLDAKTTQVKAKHQLPTPATNDLWIMNDLLFVESKQNLSCFSMKEGLQKSWDLKLPDSSLAGAPSMIDKQLLLSLQNGTLLSVDPQSGQIHSKADVPLPASGSIVNLEKLFVVPTVDGSLYRIDQVLQ 1222
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A0A350KCW7_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KCW7_9PLAN) HSP 1 Score: 174 bits (441), Expect = 6.800e-53 Identity = 90/159 (56.60%), Postives = 117/159 (73.58%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
LS ID KQP+D AGI + +AV+DASG LQ+LD K+ Q K KLQL PA++DL + D LFV+++Q L+C+ + L+++W L LP SLAG P+ ++L LSLQNG V +VD QTG+V +E APLP+SGSVV LE LLVP++DGSLYRIDQ LQ
Sbjct: 2 LSVIDQKQPIDFKAGIGKDTLAVSDASGLLQLLDLKSLQPKAKLQLDTPATSDLRLIDPFLFVQTKQNLSCFNINQGLEKIWNLDLPDASLAGPPAIIKNQLLLSLQNGKVQSVDLQTGKVSAELVAPLPASGSVVNLENFLLVPTMDGSLYRIDQALQ 160
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A0A517WZU6_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WZU6_9PLAN) HSP 1 Score: 187 bits (476), Expect = 3.770e-52 Identity = 90/159 (56.60%), Postives = 126/159 (79.25%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
+S D KQP+D +AGIS IA++DASGQLQ+LDAKTGQ K KLQL++PA+NDLWIT +LLFVES+Q L+C+++ + LQ+ W LKL SL G PS ++ L+L+NG+++ V+ +TG++Q+E PLP+SG+ V L++++LVP+VDGSLYRIDQ LQ
Sbjct: 1060 VSMTDNKQPIDFNAGISNNFIAISDASGQLQLLDAKTGQPKEKLQLASPAANDLWITKDLLFVESKQNLSCFDISNGLQKRWDLKLSDSSLTGQPSMYADQILLTLRNGTLITVEAKTGKIQTEFNTPLPTSGATVNLDQIMLVPTVDGSLYRIDQVLQ 1218
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A0A2E2C2X1_9PLAN (FHA domain-containing protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C2X1_9PLAN) HSP 1 Score: 185 bits (469), Expect = 3.300e-51 Identity = 91/159 (57.23%), Postives = 122/159 (76.73%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
LS+ D KQP+D AG+ + +AV DASG LQ+LD +TGQ + +LQL+APA++DLW+TD LFV+S+Q L+C+ + L+++W L LPG +LAG P+ ++L LSLQNG VL+VD Q+G+V +E APLP+ G VV LE LLLVP+VDGSLYRIDQ LQ
Sbjct: 1059 LSSTDKKQPIDFKAGVGKKSVAVADASGLLQLLDLQTGQPQARLQLNAPATSDLWLTDPFLFVQSKQILSCFNIDQGLEKVWSLDLPGTALAGPPAVLNNQLLLSLQNGKVLSVDLQSGKVSAELVAPLPAIGPVVNLENLLLVPTVDGSLYRIDQALQ 1217
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A0A517VFQ6_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VFQ6_9PLAN) HSP 1 Score: 182 bits (462), Expect = 2.890e-50 Identity = 92/159 (57.86%), Postives = 116/159 (72.96%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
LS D KQP+D AG+ + +AVTDASG LQ+LD KTG K +LQL PA++DLW+ D LFV+S+Q L CY +K L+++W L+LP SLAG P ++L LSLQNG V +VD QTG+V +E APLP+ GSVV LE LL+P+VDGSLYRIDQ LQ
Sbjct: 1058 LSVTDKKQPIDFKAGVGKDLLAVTDASGLLQLLDLKTGHPKARLQLDMPATSDLWLIDQFLFVQSKQNLICYNIKQGLEKIWNLELPNTSLAGPPVIIKNQLLLSLQNGKVQSVDLQTGKVSTELMAPLPAIGSVVNLENFLLIPTVDGSLYRIDQALQ 1216
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A6CAA8_9PLAN (FHA domain-containing protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A6CAA8_9PLAN) HSP 1 Score: 174 bits (442), Expect = 1.420e-47 Identity = 90/159 (56.60%), Postives = 119/159 (74.84%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVESRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
LS ID KQP+D AGI + +AV+DASG LQ+LD K+ Q K KLQL++PA++DL + D LFV+++Q L+C+ + L+++W L LP SLAG P+ ++L LSLQNG V +VD QTG+V +E APLP+SGSVV LE LLVP++DGSLYRIDQ LQ
Sbjct: 1050 LSVIDKKQPIDFKAGIGKDTLAVSDASGLLQLLDLKSLQPKAKLQLASPATSDLRLIDPFLFVQTKQKLSCFNINQGLEKIWNLDLPDASLAGPPAIIKNQLLLSLQNGKVQSVDLQTGKVSAELVAPLPASGSVVNLENFLLVPTMDGSLYRIDQALQ 1208
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Match: A0A517ZYI4_9PLAN (Outer membrane biogenesis protein BamB n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZYI4_9PLAN) HSP 1 Score: 84.0 bits (206), Expect = 7.700e-16 Identity = 49/160 (30.63%), Postives = 81/160 (50.62%), Query Frame = 1
Query: 1 LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPASNDLWITDNLLFVE-SRQTLTCYELKDSLQQLWQLKLPGHSLAGSPSKDGSRLFLSLQNGSVLAVDPQTGQVQSETTAPLPSSGSVVTLEKLLLVPSVDGSLYRIDQGLQ 477
++ I L VDV +S + + DA L VL+ ++ ++ K L PA W+ ++ ++++ R+ L C++L D+L +LW++ LP SLAG+P L +LQNG +L ++P TG+VQ L L+V S DG + Q
Sbjct: 1036 VTLIHLDHAVDVGMVVSGDRLLIADAEPSLSVLNGRSLEVVAKAALPQPAPLAPWMIEDRVYIQCGREQLICFQLGDTLNKLWEVPLPQTSLAGTPLMQDGELLAALQNGEILRINPDTGEVQHRYNVQQAIGDGPYLLGDQLVVISPDGGFIAVQTEKQ 1195 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113873.2878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113873.2878.1 >prot_M-pyrifera_M_contig113873.2878.1 ID=prot_M-pyrifera_M_contig113873.2878.1|Name=mRNA_M-pyrifera_M_contig113873.2878.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp LSTIDLKQPVDVDAGISQTDIAVTDASGQLQVLDAKTGQLKTKLQLSAPAback to top mRNA from alignment at M-pyrifera_M_contig113873:98..574+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113873.2878.1 ID=mRNA_M-pyrifera_M_contig113873.2878.1|Name=mRNA_M-pyrifera_M_contig113873.2878.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=477bp|location=Sequence derived from alignment at M-pyrifera_M_contig113873:98..574+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113873:98..574+ >mRNA_M-pyrifera_M_contig113873.2878.1 ID=mRNA_M-pyrifera_M_contig113873.2878.1|Name=mRNA_M-pyrifera_M_contig113873.2878.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=954bp|location=Sequence derived from alignment at M-pyrifera_M_contig113873:98..574+ (Macrocystis pyrifera P11B4 male)back to top |