mRNA_M-pyrifera_M_contig113210.2753.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: A0A2C9UJB7_MANES (JmjC domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UJB7_MANES) HSP 1 Score: 143 bits (360), Expect = 4.670e-40 Identity = 72/166 (43.37%), Postives = 96/166 (57.83%), Query Frame = 1
Query: 4 YEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVERAVQGKEQ--IYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWDHLA---------ERDD-----YRFVYAGTKGSFTPLHCDVFHSFSW 453
Y EF E+ L +N+P ++ + D WRA +W G Q + FG +V VA CG +++ DQ+R EMTV EF+E V+G +YLKDWH V++ + AY PL+ DDW+N + DH E DD YRFVY G KGS+TPLH DVF S+SW
Sbjct: 19 YNEFAERYLAKNQPVVLTGLMDDWRACRDWKTDNGYPNLQFFSTHFGKSKVQVADCGTREFTDQKRVEMTVSEFIEHWVEGSSNSLLYLKDWHFVKEYPEYVAYRTPLLFCDDWLNLYLDHYRMHKDPDTNQENDDITCSDYRFVYMGAKGSWTPLHADVFRSYSW 184
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: A0A2C9UL80_MANES (JmjC domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UL80_MANES) HSP 1 Score: 143 bits (360), Expect = 5.920e-39 Identity = 72/166 (43.37%), Postives = 96/166 (57.83%), Query Frame = 1
Query: 4 YEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVERAVQGKEQ--IYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWDHLA---------ERDD-----YRFVYAGTKGSFTPLHCDVFHSFSW 453
Y EF E+ L +N+P ++ + D WRA +W G Q + FG +V VA CG +++ DQ+R EMTV EF+E V+G +YLKDWH V++ + AY PL+ DDW+N + DH E DD YRFVY G KGS+TPLH DVF S+SW
Sbjct: 19 YNEFAERYLAKNQPVVLTGLMDDWRACRDWKTDNGYPNLQFFSTHFGKSKVQVADCGTREFTDQKRVEMTVSEFIEHWVEGSSNSLLYLKDWHFVKEYPEYVAYRTPLLFCDDWLNLYLDHYRMHKDPDTNQENDDITCSDYRFVYMGAKGSWTPLHADVFRSYSW 184
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: D8S1Y8_SELML (JmjC domain-containing protein (Fragment) n=8 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S1Y8_SELML) HSP 1 Score: 140 bits (354), Expect = 3.440e-38 Identity = 69/163 (42.33%), Postives = 99/163 (60.74%), Query Frame = 1
Query: 1 AYEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVER----AVQGKEQIYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWDH--------LAERDDYRFVYAGTKGSFTPLHCDVFHSFSW 453
+Y+EF E+ LL N+P LV + + WRA+ +W G+ + LA++FG ++ VA CGE+++ DQ+R EMTV EFV + + +YLKDWH V++ +GAY+ P+ SDDW+N D DYRFVY G G++TPLH DVF S+SW
Sbjct: 16 SYQEFRERYLLPNKPVLVTGLMEHWRASRDWVDDHGKPDLEFLARNFGGSKIQVADCGEREFTDQKRLEMTVSEFVTHWKSDDPERRALLYLKDWHFVKEFPDYGAYETPIFFSDDWLNQFLDSNSWHSSGDTVPSSDYRFVYMGPAGTWTPLHADVFRSYSW 178
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: UPI000B5D53E1 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X1 n=3 Tax=Manihot esculenta TaxID=3983 RepID=UPI000B5D53E1) HSP 1 Score: 143 bits (360), Expect = 9.090e-38 Identity = 72/166 (43.37%), Postives = 96/166 (57.83%), Query Frame = 1
Query: 4 YEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVERAVQGKEQ--IYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWDHLA---------ERDD-----YRFVYAGTKGSFTPLHCDVFHSFSW 453
Y EF E+ L +N+P ++ + D WRA +W G Q + FG +V VA CG +++ DQ+R EMTV EF+E V+G +YLKDWH V++ + AY PL+ DDW+N + DH E DD YRFVY G KGS+TPLH DVF S+SW
Sbjct: 19 YNEFAERYLAKNQPVVLTGLMDDWRACRDWKTDNGYPNLQFFSTHFGKSKVQVADCGTREFTDQKRVEMTVSEFIEHWVEGSSNSLLYLKDWHFVKEYPEYVAYRTPLLFCDDWLNLYLDHYRMHKDPDTNQENDDITCSDYRFVYMGAKGSWTPLHADVFRSYSW 184
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: A0A6N2K5Q1_SALVM (JmjC domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2K5Q1_SALVM) HSP 1 Score: 137 bits (344), Expect = 1.270e-37 Identity = 70/180 (38.89%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 1 AYEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVERAVQ---------------GKEQIYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWDH---------LAERD-----DYRFVYAGTKGSFTPLHCDVFHSFSW 453
+Y EF E+ L +N+P ++ + D WRA +W G+ + + FG +V VA CG +++ DQ+R EMTV EF++ + GK +YLKDWH V + + AY PL DDW+N + DH E D DYRFVY G KGS+TPLH DVF S+SW
Sbjct: 18 SYNEFVERYLAKNQPVVLTGLMDGWRACKDWVFDNGKPNLKLFSTHFGNSKVQVADCGTKEFTDQKRVEMTVSEFIDHWIDDRECGGASNSFQEGNGKFVLYLKDWHFVTEYPEYVAYKTPLFFCDDWLNLYLDHHRMHNDSDTCQENDGISCSDYRFVYMGAKGSWTPLHADVFRSYSW 197
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: M1BJM2_SOLTU (Transcription factor n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1BJM2_SOLTU) HSP 1 Score: 138 bits (347), Expect = 7.840e-37 Identity = 71/169 (42.01%), Postives = 97/169 (57.40%), Query Frame = 1
Query: 4 YEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVER-----AVQGKEQIYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWDHL---------AERD-----DYRFVYAGTKGSFTPLHCDVFHSFSW 453
Y EF EK + QN+P ++ + D WRA +W P G+ + FG V VA CG +++ DQ+R EMTV EFV+ A G +YLKDWH V++ + AY P+ SDDW+N + D +ER+ DYRFVY G+KG++TPLH DVF S+SW
Sbjct: 19 YSEFAEKYMSQNQPVVLTGLMDDWRACKDWVSPNGKPNLHYFSTHFGKSEVQVADCGTREFTDQKRIEMTVSEFVDHWLRDCAAGGGSLLYLKDWHFVKEYPEYIAYRTPMDFSDDWLNFYLDKFRMHNDPDTYSERNEISCSDYRFVYMGSKGTWTPLHADVFRSYSW 187
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: A0A8J9YLZ0_BRALA (JMJD4 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YLZ0_BRALA) HSP 1 Score: 139 bits (350), Expect = 1.080e-36 Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = 1
Query: 4 YEEFFEKALLQNRPFLV-KNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVE--------RAVQGKEQIYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWDHLAE-RDDYRFVYAGTKGSFTPLHCDVFHSFSW 453
Y+EF+ + L NRP L +V WR++ EW G+ W L + FGT VPVA C + +Y Q +E+MT+ EF++ GK +YLKDWH + +GAY+ P+ DW+N WD DDYRFVY G KGS+TPLH DVF S+SW
Sbjct: 40 YQEFYLRYLRPNRPCLFGSHVTSHWRSSREWVSKDGKPNWNTLKEMFGTLTVPVADCKKVEYQAQPKEDMTLAEFLDYWQDLCRSEHDPGKPCLYLKDWHFCRSVPDYGAYETPVYFQSDWLNEFWDQRYHGEDDYRFVYMGPKGSWTPLHADVFRSYSW 199
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: A0A3Q7FS66_SOLLC (JmjC domain-containing protein n=12 Tax=Solanum TaxID=4107 RepID=A0A3Q7FS66_SOLLC) HSP 1 Score: 140 bits (352), Expect = 1.120e-36 Identity = 73/169 (43.20%), Postives = 101/169 (59.76%), Query Frame = 1
Query: 4 YEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVERAVQ-----GKEQIYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWD--HL-------AERDD-----YRFVYAGTKGSFTPLHCDVFHSFSW 453
Y EF EK + QN+P L+ + D WRA +W P G+ + FG +V VA CG +++ DQ+R EMTV EFV+R + G +YLKDWH V++ + AY P+ SDDW+N + D H+ +ER+D YRFVY G+KG++TPLH DVF S+SW
Sbjct: 19 YSEFAEKYMSQNQPVLLTGLMDDWRACKDWVSPNGKPNLHFFSTHFGKSKVQVADCGTREFTDQKRIEMTVSEFVDRWLHDGGAGGGSLLYLKDWHFVKEYPEYIAYRTPMDFSDDWLNFYLDKFHMHNDPDTYSERNDITCSDYRFVYMGSKGTWTPLHADVFRSYSW 187
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: A0A1U7VSV7_NICSY (jmjC domain-containing protein 4 isoform X2 n=2 Tax=Nicotiana sylvestris TaxID=4096 RepID=A0A1U7VSV7_NICSY) HSP 1 Score: 136 bits (343), Expect = 3.330e-36 Identity = 72/180 (40.00%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 1 AYEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVER---------------AVQGKEQIYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWD--HL-------AERD-----DYRFVYAGTKGSFTPLHCDVFHSFSW 453
+Y EF EK + QN+P ++ + D WRA +W P G+ ++ FG +V VA CG +++ DQ+R EMTV EFV+ GK +YLKDWH V++ + AY P+ SDDW+N + D H+ +ER+ DYRFVY G KG++TPLH DVF S+SW
Sbjct: 18 SYGEFVEKYMAQNQPVVLTGLMDDWRACKDWVSPNGKPNLHFISTHFGKSKVQVADCGTREFTDQKRIEMTVSEFVDHWLHLSSANNGGNCDCGAAGKPLLYLKDWHFVKEYPEYIAYRTPVDFSDDWLNLYLDKFHMHNDPDTYSERNEISCSDYRFVYMGAKGTWTPLHADVFRSYSW 197
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Match: A0A067K4B1_JATCU (JmjC domain-containing protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067K4B1_JATCU) HSP 1 Score: 139 bits (349), Expect = 4.050e-36 Identity = 71/174 (40.80%), Postives = 99/174 (56.90%), Query Frame = 1
Query: 1 AYEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCRVPVALCGEQQYNDQRREEMTVGEFVERAVQG---------KEQIYLKDWHLVQQEAHFGAYDVPLMVSDDWINAHWDH-------LAERD-------DYRFVYAGTKGSFTPLHCDVFHSFSW 453
+Y EF E+ L +N+P ++ + D WRA +W G Q + FG +V VA CG +++ DQ+R EMTV EF++ V+G K +YLKDWH V++ + AY P+ SDDW+N + DH + +D DYRFVY G KGS+TPLH DVF S+SW
Sbjct: 18 SYNEFIERYLAKNQPVVLTGLMDDWRACEDWVTADGFPNLQFFSTLFGKSKVQVADCGTREFTDQKRVEMTVSEFIDNWVEGNASHDVDNEKSLLYLKDWHFVKEYPEYVAYRTPIYFSDDWLNLYLDHHCIHKDPVTYQDNNEICCSDYRFVYMGAKGSWTPLHADVFRSYSW 191 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113210.2753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113210.2753.1 >prot_M-pyrifera_M_contig113210.2753.1 ID=prot_M-pyrifera_M_contig113210.2753.1|Name=mRNA_M-pyrifera_M_contig113210.2753.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp AYEEFFEKALLQNRPFLVKNVADSWRATAEWALPGGRVAWQRLAQDFGTCback to top mRNA from alignment at M-pyrifera_M_contig113210:3..455- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113210.2753.1 ID=mRNA_M-pyrifera_M_contig113210.2753.1|Name=mRNA_M-pyrifera_M_contig113210.2753.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig113210:3..455- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113210:3..455- >mRNA_M-pyrifera_M_contig113210.2753.1 ID=mRNA_M-pyrifera_M_contig113210.2753.1|Name=mRNA_M-pyrifera_M_contig113210.2753.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig113210:3..455- (Macrocystis pyrifera P11B4 male)back to top |