mRNA_M-pyrifera_M_contig113090.2724.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: A0A401FTA9_9DELT (Uncharacterized protein n=1 Tax=Desulfonema ishimotonii TaxID=45657 RepID=A0A401FTA9_9DELT) HSP 1 Score: 63.9 bits (154), Expect = 2.330e-10 Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 1
Query: 4 GYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLAMAEVQPFRSASDRTGIIDDKYRWRLDL------NLEKRESSDAASAGDDFHRLVTLVVTIYWTSAGREQKFELRTV 363
G+TL+EVL A++ILA S +L S G ++ R++ E A+ HA+ +A + S ++RTG +D YRW L + E E A+ H L + VT++W + RE+ FE+ TV
Sbjct: 7 GFTLIEVLTAMMILAISLVTILQLFSGGLKSARLSDEYTRAIFHAKEKMAEILLADRLSETERTGEFEDGYRWSFRLVSLEPADEEFSEDGRPAATQSPVH-LFHITVTVFWDTGNRERHFEISTV 131
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: A0A7W0FEF0_9BACT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7W0FEF0_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 8.980e-9 Identity = 35/122 (28.69%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 1 RGYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLAMAEVQPFRSASDRTGIIDDKYRWRLDLNLEKRESSDAASAGDDFHRLVTLVVTIYWTSAGREQKFELRTVR 366
+G+TLLEV++A+ I+ S +++ S G R+ RV+ + +AV HA+ + + P A D DD Y+W+ +++ +A GD +L+ + V + W + G+++ EL T++
Sbjct: 4 KGFTLLEVIIAIAIMGISVVMIMQLFSGGLRSGRVSRDYTMAVIHAKEKMEEMLISPAAGAGD----FDDNYKWQTEIS-----PYISAEKGDS--KLIKISVKVSWDAPGKDRSIELATLK 114
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: A0A3A4S3M4_9DELT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4S3M4_9DELT) HSP 1 Score: 57.4 bits (137), Expect = 1.470e-7 Identity = 35/127 (27.56%), Postives = 66/127 (51.97%), Query Frame = 1
Query: 1 RGYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLAMAEVQPFRSASDRTGIIDDKYRWRLDLNLEKRESSDAASAGDDFHRLVTLVVT-------IYWTSAGREQKFELRT 360
+G+TL+EVLVA+++LA S V++ S G ++++++ + + HA + + + + +G +D YRW + E+ + AGDD + L V+ + W + RE++FEL T
Sbjct: 43 KGFTLIEVLVAVMVLAISLVVIMQLFSGGLKSNKISNDYQYGIFHAREKMEELLLAQEWAPGETSGDFEDGYRWTATIEEIPDETDGSEDAGDDEELVKKLPVSTLLIRLNVIWNNGDREKRFELTT 169
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: A0A842NET9_9DELT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A842NET9_9DELT) HSP 1 Score: 56.2 bits (134), Expect = 2.490e-7 Identity = 34/121 (28.10%), Postives = 60/121 (49.59%), Query Frame = 1
Query: 4 GYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLAMAEVQPFRSASDRTGIIDDKYRWRLDLNLEKRESSDAASAGDDFHRLVTLVVTIYWTSAGREQKFELRTVR 366
G+TL+E+LVA+ ILA S V+L S G ++ R++ E + HA + + SA + G D +RW+ + L + D + + V I W G+E++F++ T++
Sbjct: 24 GFTLIEILVAISILAISLVVILQLFSGGLKSSRLSDEYTRGIFHAREKMGEVLLSKEVSAGETEGEFSDSFRWKCQIELIESVEEDEEKLP---FNMFNIKVDIVWDVGGKEKRFQVSTIK 141
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: A0A2G6NFX9_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2G6NFX9_9DELT) HSP 1 Score: 55.5 bits (132), Expect = 4.640e-7 Identity = 36/125 (28.80%), Postives = 65/125 (52.00%), Query Frame = 1
Query: 1 RGYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLAMAEVQPFRSASDRTGIIDDKYRWRLDLNLEKRESSDAASAGDDFHRLVTLV---VTIYWTSAGREQKFELRTVR 366
+G+TL+E LVA+++L S ++L S G R+ + AA+ A+ HA++V+ + + ++ G+ DD Y W L + E D A + V L+ V++ W + RE+ L T++
Sbjct: 9 QGFTLMETLVAMMVLGISLVMVLQLFSGGLRSEKRAADTTRALMHAQAVMDRFLLAADYTTAETEGVFDDGYAWTLTYETYEPEIKDDADLLPEVTYPVDLILVAVSVRWAAGVREKTLALSTLK 133
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: A0A2N2HKR6_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 TaxID=2013746 RepID=A0A2N2HKR6_9DELT) HSP 1 Score: 53.9 bits (128), Expect = 1.750e-6 Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 4 GYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLA--MAEVQPFRSASDRTGIIDDKYRWRLDLNLEKRESSDAASAGDDFHRLVTLVVTIYWTSAGREQKFELRTVR 366
G+TLLEVLVAL ++A + T++L +A R+ V+A+ A A A++ L +A+V+P T DD YR + + E ++ R++ + +TI WT+ GRE+ EL++++
Sbjct: 23 GFTLLEVLVALAVMAIAGTLILQLFAANLRSISVSADVTAASARADARLRELLADVRPAERTWTET--TDDGYRMDVSMAETLAERTEGLPV-----RMMEVSLTIRWTAGGRERSLELKSMK 138
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: A0A1W9MRW3_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium IS3 TaxID=1934248 RepID=A0A1W9MRW3_9DELT) HSP 1 Score: 53.5 bits (127), Expect = 2.330e-6 Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 1
Query: 1 RGYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHA-ESVLAMAEVQPFRSASDRTGIIDDKYRWRLDLN-LEKRESSDAASAGDDFHRLVTLVVTIYWTSAGREQKFELRTVR 366
RG+TL+EVLVA++IL+ S TV+L S G +A ++ AV +A E + A+ + F S + + G DD +RW+ D+ LE E D F ++ V + W E+ FE+ T++
Sbjct: 12 RGFTLIEVLVAMMILSISLTVILQLFSGGLKAAGMSENYTRAVFYAREQMEAILLAEEFESGTWK-GEFDDDFRWKSDIVWLEPSEEEKDRIPLDIF----SITVKVIWNEGPNEKSFEIGTLK 130
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: A0A524KV68_9DELT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Syntrophobacterales bacterium TaxID=2282155 RepID=A0A524KV68_9DELT) HSP 1 Score: 53.5 bits (127), Expect = 2.710e-6 Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = 1
Query: 4 GYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLAMAEVQPFRSASDRTGIIDDKYRWRLDL-NLEKRESSDAASAGDDFHRLVTLVVTIYWTSAGREQKFELRTVR 366
G+TL+EVLVAL +LA V+L S G ++ +++ E + HA+ + + G D +RW+ D+ LE+RE A D F T+ V + W G E+ FE+ T++
Sbjct: 29 GFTLVEVLVALSLLAICLVVILQLFSGGLKSGKLSDEYTRGIFHAKEKMEEILLLDTVEEGVTEGEFGDDFRWKADIVRLEQREEETARLPFDTF----TIAVEVSWGVDGHEKHFEINTLK 146
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: A0A369C7D6_9GAMM (General secretion pathway protein I n=2 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369C7D6_9GAMM) HSP 1 Score: 52.8 bits (125), Expect = 3.620e-6 Identity = 49/123 (39.84%), Postives = 61/123 (49.59%), Query Frame = 1
Query: 1 RGYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLAMAEVQPFRSASDRTGIIDDKYRWRLDL-NLEKRESSDAASAGDDFHRLVTLVVTIYWTSAGREQKFELRTVR 366
RG+TLLEVLVA VILA S VLL SAG R R+AA+ AVA AES LA V + G +RWR ++ L+ + A RL + V I W S + L T+R
Sbjct: 10 RGFTLLEVLVAFVILALSLGVLLGIFSAGLRNTRLAADYSAAVALAESRLAELGVTSPLAPGIEEGAGAGPFRWRSEVVELDPVDEPGGPGAA----RLYRVEVEIAWDSLLGPRTVSLATLR 128
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Match: UPI000488CEEB (type II secretion system GspH family protein n=1 Tax=Desulforegula conservatrix TaxID=153026 RepID=UPI000488CEEB) HSP 1 Score: 52.8 bits (125), Expect = 3.690e-6 Identity = 33/122 (27.05%), Postives = 62/122 (50.82%), Query Frame = 1
Query: 1 RGYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLAMAEVQPFRSASDRTGIIDDKYRWRLDLNLEKRESSDAASAGDDFHRLVTLVVTIYWTSAGREQKFELRTVR 366
+G+TL+E+LVA+++LA S T+++ S G R + A+ HA +++ A +P ++G IDD++RW + D + + + V + WT G + +EL T++
Sbjct: 13 QGFTLMEILVAVMLLAISLTIIMQQFSGGIRNITLTDSYSKAINHARNLMEEALSEPKLLEGTQSGTIDDEFRWTRTMTF----IPPVKGKKDSVVKELEIAVRVEWTFLGMVRDYELVTIK 130 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113090.2724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113090.2724.1 >prot_M-pyrifera_M_contig113090.2724.1 ID=prot_M-pyrifera_M_contig113090.2724.1|Name=mRNA_M-pyrifera_M_contig113090.2724.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp RGYTLLEVLVALVILAASATVLLSAMSAGFRAHRVAAERLLAVAHAESVLback to top mRNA from alignment at M-pyrifera_M_contig113090:196..579- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113090.2724.1 ID=mRNA_M-pyrifera_M_contig113090.2724.1|Name=mRNA_M-pyrifera_M_contig113090.2724.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig113090:196..579- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113090:196..579- >mRNA_M-pyrifera_M_contig113090.2724.1 ID=mRNA_M-pyrifera_M_contig113090.2724.1|Name=mRNA_M-pyrifera_M_contig113090.2724.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig113090:196..579- (Macrocystis pyrifera P11B4 male)back to top |